Os12g0479400
| Gene Name |
Os12g0479400 |
|---|---|
| Description |
Similar to Auxin response factor 1 |
| Version |
NM_001073297.1 GI:115488555 GeneID:4352211 |
| Length |
6005 bp |
| Definition |
Oryza sativa Japonica Group Os12g0479400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:17716573..17722577 |
| Sequence Coding Region |
17717123..17717306,17717401..17717591,17717932..17718842,17718928..17719099,17719184..17719259 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:17716573..17722577 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:17716573..17722577 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggctgctgcagcgacggcggcggcctcgccggttgaggggctcaccggcggcggcggcggtggtggtggaggagtggacgggctgttcgtggagctgtggcgcgcgtgcgcggggccgctggtgacggtgcccgccgtcggggagagggtcttctacctcccgcagggccacatcgagcaggtggaggcatcgacgaaccaggtcgccgagcagcagggggctccgctctacaatctgccatggaagatcccgtgcaaggtcatgaacgtcgagctcaaggctgagcctgatacggatgaggtgtatgcgcagctcaccctgcttccggagaagcaggatgggaatgggagtggtaacgggaatgtgtccaaagacaaggtggaggaggaagaggtggtgccaccagctgcaactgagcggccccgggtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcggtgctgcgccggcacgcggatgagtgcctcccaccactggatatgagtcagcatcccccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatcttccgaggtcagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcatatttctcagaggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaatattccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgcagtgaacactggaaccatgttcactgtgtactacaagccaaggactagtccatctgaatttgtggtaccacgtgatctgtacaaggaatctctgaaacgaaatcattcaatagggatgagattcaagatgacatttgaaggcgaagaggctgcagagcaaagattcactggcacaattgttggagtaggtgattctgacccatctggttgggctgactcaaaatggcgttcccttaaggtgcgatgggatgaagctgcttctgttcctcgtcctgatagggtttctccttggcaaatagaacctgctaacagcccttcccctgtcaaccctcttccagcaccccgaaccaagcgggctcgtccaaatgttttagcttcctcacctgacttgtctgctgtaaacaaagaagttgcttcaaaagtcatggcaaactcgcagcaaaatggtcttccaagggccttccacagtcaagaaaacatgaatttgagaagtcgttttggtgatagcaatgagctaaatacttcccaaaagcttaccatgtggtcttcaggaagcaatcaagagaaaaataatgtttctgtccagagggagctaggttcacagagttggatgcagatgagaaggcctgatggttcctctgagatattatctggatttcaaccactgaaagatacgcggaaccctctgagttcatttcctagtcagatatctggaaaccgttcaaatacgtggaacacaatcaatgttcattatcccgaccaaaatgccaatcataatatgtaccctggcacatggtctcttatgcctccaaacactggttttggtgtgaatcagcagaactacctaatgacgcctgacatcacactccctcaaaggtctcttaatgccaagtttggtgggaatggagcattcacttcgcttcgggcccatggcatagatcagcgctcctctggttggcttgggcatattgagccaagttctcacattgatgatgcctcatcgagtcttatcaagccacagcctttggttattgatcacaatgttcagaaagctaaaggctcttcatgcatgctatttgggatttctcttgacagccctgcaaaacctgaactattgatatccccaccaagtgttgcatttgatgggaagctccaacaggatgcacttgaagaggatgaatgctctgatccttccaagactgtgaagccacttgatggagctcagcacgattctgctagagagaaacatcagtcatgtccagatggtaccaaaaacattcagagtaaacagcaaaatggttcctcccgaagttgcaagaaggtccacaagcaaggaatcgcactcgggaggtcaatagatcttacaaagttcacttgctatgatgagttgattgctgaactggaccagatgtttgacttcaatggtgagctgaacagttcaagcaagaactggatggtcgtttacactgataatgagggtgacatgatgttggttggtgatgatccttggaatgaattctgcaacatggttcataaaatcttcatctacacgagggaggaggtccagaagatgaatccgggtgccctaaactcaaggtcagaggatagccggtctacttccgtggaacgagggctagttggcgaagggctccaaggtggtctatccaccccatcactgaattctgagaactgctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAATAAASPVEGLTGGGGGGGGGVDGLFVELWRACAGPLVTV PAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEV YAQLTLLPEKQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHG GFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSV FVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHA VNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGT IVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPRT KRARPNVLASSPDLSAVNKEVASKVMANSQQNGLPRAFHSQENMNLRSRFGDSNELNT SQKLTMWSSGSNQEKNNVSVQRELGSQSWMQMRRPDGSSEILSGFQPLKDTRNPLSSF PSQISGNRSNTWNTINVHYPDQNANHNMYPGTWSLMPPNTGFGVNQQNYLMTPDITLP QRSLNAKFGGNGAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNV QKAKGSSCMLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPLDG AQHDSAREKHQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELI AELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQ KMNPGALNSRSEDSRSTSVERGLVGEGLQGGLSTPSLNSENC</aaseq> |
| Gene Sequence |
<dnaseqindica>5272..5455#4987..5177#3736..4646#3479..3650#3319..3394#3097..3216#2726..2890#2545..2635#2003..2087#1692..1883#1546..1599#1334..1432#435..550#289..355#ggagaagagagagagagacggacacaagccacgcagcagcagcagccagcagcggcagcggcagcggcagggacacaaactgacgtcgccttcatcgtcctcctcctccgcctacataaatcccaccccgacctcctccgccgcttcctcttctcccctccgccgcaggtgtgggggttcaccggtgagcgagcttggacgtggcggagggcggaattgtgggggttctttcagttctccgagcgattcggggaagggggagaggagaggtggtggatgtgagatccgatggctgctgcagcgacggcggcggcctcgccggttgaggggctcaccggcggcggcggcggtggtggtgagtgctcgtgtgggtgtgagagggttggtttgtgctgtttctgaggaggattttgggggtgggttttggtgtgcaggtggaggagtggacgggctgttcgtggagctgtggcgcgcgtgcgcggggccgctggtgacggtgcccgccgtcggggagagggtcttctacctcccgcagggccacatcgagcaggtgaggaggcggaggaggaggtgcagcgcggagagggagaacctcccgttgcttctctcacccacgcgggctggatgggggagagctgcttgtgttgctgttttttttttgtgcggatttggtgtgctttgagcccgaaattctctccgaattttttttttgggggggggggggggggtttgtgtttgtgggggtttggggcgatcgatcccgaattgccgagtttttcgggggttttggcgcgggttcatgccgctcctcatctcgatctggggaattcgggtgcttccagcttcgagctgctcttcgatttgaaaatttcttgatcctggttcgtcaaacacgtcgcctttgtgctgaattttcgattttcctcgtctcccatgattttcctcgatgggggaagggtttgggttttcccaatgtgagcgccattgccacctcggtcttgcgaaatccgcggatttggggcggaaaattctgtgctcctcctgtgaccgtggacgaattctaggtttttttagtgctttttttactactggttactactactactgcgggggtgagttcatttgacctgggagatttggtctttctttagtgcctccaatggcatgagtacctttatgttttttttaatcccaaagtttggggctttaataattttttaaccgcgactccgggggagagagatgcgcaatgatgttcttgccttgcctttgtgatttggaggagagacctgattcttttctgctgctgctgctttcttctgttctgttccaggtggaggcatcgacgaaccaggtcgccgagcagcagggggctccgctctacaatctgccatggaagatcccgtgcaaggtcatgaacgtcgagctcaaggtgttcatcctggctgcatttcttaccccagtagctcctttgctgctatttttttttaccatttttgttagggggtatatgaggggtgtaatacttgtttcatgtttggataggctgagcctgatacggatgaggtgtatgcgcagctcaccctgcttccggagaaggtgtgtgtgaggcgctttcgcttgcgttttcggtgtagaattggggtcttgaacgctgatagcttgtgtttttctttgttgatttacagcagcaggatgggaatgggagtggtaacgggaatgtgtccaaagacaaggtggaggaggaagaggtggtgccaccagctgcaactgagcggccccgggtgcactccttctgcaagacgctcactgcgtcggacacgagcacgcatggtggcttctcggtgctgcgccggcacgcggatgagtgcctcccaccactggttaggcccttgtaacctttgacttgatgctggttacgttgttgtctctgttgttggtccagtacagcttttttgataggctaattgtagcaatgcctttgacgtcgctgcttgatcaggatatgagtcagcatcccccaacacaagagctggtggccaaggatcttcatggggttgagtggcgcttccgtcacatcttccgaggtgatacttcatcctccttgtaatggatttgtgccaaaagaatgtatccagctctttcatgtttgtttcctcagcctccatgacatgaattcccagcctttacttgttagtataatgcaatacagaccatttttgtgtcttgtggacccatttactttgatcttagatgcataatctgatgtggcacgtataaaaattaattcggttcaatgatatggaccatctgtctgcaaatattttgtgcatttaggtttcttttggtatggacctgcctttgatacttagtgcaaaatgatggctatctatcagacagttgttcatttgcgtgcttagctttatttgttaaggctcccctgctccattgtcctccgtggtgacattgcagcttgcttaattttagttggttgagtatctcttgaaagttgaaactaagaagtctctggttgcatgatatcaggtcagccacgaagacaccttctccagagtggttggagtgtttttgtgagtgccaaacgccttgttgctggagatgccttcatatttctcaggtgtggaattttttcatgctgaacaattcatgttacttgttttctgctccagtctacttaaccaaagctccccttttattacatgaatagaggtgagaatggggaactacgagttggagttcggcgtgcaatgagacaacaagctaatattccatcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgcagtgaacactggaaccatgttcactgtgtactacaagccaaggtttgtgataactggcaaattgtatacttaagcaattctgttttcagtttggaagcgatgctattccatttgtctctcattgttgtagtagaatccataatcctatacacgatagagcaaagtttttaattgagttagtgacagtgatattgcgcctgccaatcagttgcatgtttttaattgagttagtgacactgatattgcaggactagtccatctgaatttgtggtaccacgtgatctgtacaaggaatctctgaaacgaaatcattcaatagggatgagattcaagatgacatttgaaggcgaagaggctgcagagcaaaggtaagcagctacagtcgctgcttttaaatgatgtggaacatttactaatagataattcctcttggagagatggtataaaagctttaattttttttttgctagattcactggcacaattgttggagtaggtgattctgacccatctggttgggctgactcaaaatggcgttcccttaaggtattttaccttacgtattattcctcaccttatggaatcaattgagtataccagtttattctaaagctgttcttgtgaaaataggtgcgatgggatgaagctgcttctgttcctcgtcctgatagggtttctccttggcaaatagaacctgctaacagcccttcccctgtcaaccctcttccagcaccccgaaccaagcgggctcgtccaaatgttttagcttcctcacctgacttgtctgctgtaaacaaagaaggtttgcatttgatcttgttatcgatctggaatacgtgtagtcttattgctaccattgctaatacatgttttgccttctcattcagttgcttcaaaagtcatggcaaactcgcagcaaaatggtcttccaagggccttccacagtcaagaaaacatgaatttgagaagtcgttttggtgatagcaatgagctaaatacttcccaaaagcttaccatgtggtcttcaggaagcaatcaagagaaaaataatgtttctgtccagagggagctaggttcacagagttggatgcagatgagaaggcctgatggttcctctgagatattatctggatttcaaccactgaaagatacgcggaaccctctgagttcatttcctagtcagatatctggaaaccgttcaaatacgtggaacacaatcaatgttcattatcccgaccaaaatgccaatcataatatgtaccctggcacatggtctcttatgcctccaaacactggttttggtgtgaatcagcagaactacctaatgacgcctgacatcacactccctcaaaggtctcttaatgccaagtttggtgggaatggagcattcacttcgcttcgggcccatggcatagatcagcgctcctctggttggcttgggcatattgagccaagttctcacattgatgatgcctcatcgagtcttatcaagccacagcctttggttattgatcacaatgttcagaaagctaaaggctcttcatgcatgctatttgggatttctcttgacagccctgcaaaacctgaactattgatatccccaccaagtgttgcatttgatgggaagctccaacaggatgcacttgaagaggatgaatgctctgatccttccaagactgtgaagccacttgatggagctcagcacgattctgctagagagaaacatcagtcatgtccagatggtaccaaaaacattcagagtaaacagcaaaatggttcctcccgaagttgcaagaaggttcgccgctcttgctttattgcatctttccctatgattatgttgtttcgatgcattaactactctaagctgaaatctctaatgaacaattttcgaagtatgctccaatttatttatcatgcttgctggcttgattttccagctttattgcctctgcaacattgttgttccctttattgataaactaagtctgtcacaggttacagacacctaaagacctgctagttattttatctttctactgataaaagttaaaccacatcatgcctatggattttacgtgtttggaattgactatcaatctttaaactgtactatcttttcttaataatatttttaggtccacaagcaaggaatcgcactcgggaggtcaatagatcttacaaagttcacttgctatgatgagttgattgctgaactggaccagatgtttgacttcaatggtgagctgaacagttcaagcaagaactggatggtcgtttacactgataatgagggtgacatgatgttggttggtgatgatccttggaagtaagtagtactgtcatagaaacatttcctgttgttgagttgactgatatgcataactagacttgattttaactggacccatctgtctatgtagtgaattctgcaacatggttcataaaatcttcatctacacgagggaggaggtccagaagatgaatccgggtgccctaaactcaaggtcagaggatagccggtctacttccgtggaacgagggctagttggcgaagggctccaaggtggtctatccaccccatcactgaattctgagaactgctaattcgttcggtcactgaggtacgcttttagcagcaatccctgctcctggttgcaactgcagaacaaacaatcaaactaactacgctgatgtttaacagatcttcccttcttgcaggtcttttgtggtttgcaagaacagaagacgacatatccatggtaggaaggaatcttttcgtggtgtagtagtagtagctggtgctttatatgtatcgggtaagccccgcagtaccccatttgtagatggtgcttgtcctggtatcagttgcccgctcttcgttttcgacaagttttgggtgtgctttgttgaggttttaagttattgtatgatatgccccgtagtagtgaaaggtgctgaggccaagctgccgcgcccggtgcgcttgcttgcttgcgctcttcctccctcctaagccttgtaaatagctttgcttccccccctttcttcagtcagttctaatatgttgcgaactgcggtaatcggtgtacccctcaagaaggcaaggcaatttgaccctaaaatgttgccattttaacatcctgtttgtttgccc</dnaseqindica> 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| External Link(s) |
