BGIOSGA013117

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Revision as of 09:57, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013117| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013117, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA013117

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013117, complete gene.

LocusTag

OSJNBB0007E22.16

Ensembl Transcript ID

BGIOSGA013117-TA

Ensembl Protein ID

BGIOSGA013117-PA

Length

3328

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26708883..26712210

Sequence Coding Region

26708883..26709077,26709171..26709266,26709369..26709452,26709853..26710013,26710739..26710856
,26711195..26711330,26711632..26711810,26711971..26712210

Genome Context

<gbrowseImage1> name=IndicaChromosome03:26708883..26712210 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:26708883..26712210 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTATCTGCATTCACTGCAAACCCATCCTCATCACATGGCAATACCTTATCGGGGTTGTGCTCCCGTCGGCCTGAGATATGGCACAGGAGACGCATCGGCAGCAGAATTCGGGCGCAGGCGCAGTCGCAGATGCAGTATCGGAAGCTGGGAGATTCAGACCTTGTCATCAGTGAGGTCACTCTTGGAACAATGACATTTGGAGAGCAAAACACGGAGAAGGAAGCGCACGATATTCTTTCTTATTCTTTCGATCAAGGTGTCAATATCCTTGACACAGCAGAAATGTATCCAGTGCCACCCAGAAAAGAGACTCAAGGAAGAACTGATCTATATATAGGCAGTTGGATGCAATCAAAGCCACGAGATAAGATTATTCTAGCCACAAAAGTTTCAGGTTACTCAGAGCGATCTACTTTTCTCCGGGACAATGCGAAAGTAGTTCGTGTTGATGCTGCCAATATCAAGGAAAGTGTCGAAAAGAGTCTTTCCCGCTTATCTACAGACTACATTGATTTACTCCAGATACACTGGCCAGATAGGTATGTTCCACTATTTGGTGAATACTGTTACAACCCAACCAAATGGAGGCCAAGTGTTCCATTTGAGGAACAGTTGAAAGCTTTCCAAGAGCTAATTGATGAAGGAAAGGTTCGTTATATTGGTGTTTCCAATGAAACTTCGTATGGAGTGATGGAGTTTGTACATGCTGCAAAGGTTCAAGGACTTCCAAAGATTGTGAGCATCCAGAACAGTTATAGTCTAATTGTGAGATGCCACTTCGAAGTTGACCTTGTTGAAGTGTGCCACCCAAATAACTGTAATGTTGGGTTGCTTGCCTACTCTCCATTGGCTGGAGGTGTTCTCACTGGGAAGTATATTGATACTAACCCTGACATATCAAAGAAGAGCAGGCTAAATCTCTTCCCTGGATACATGGAGCGCTACAATGCATCGTTGGCTAAAGAAGCAACGAATGAATATGTCAAGCTTGCCAAGAAGCACGGCCTAACTCCAGTCCAGCTTGCACTGGGCTTTGTGCGTGACCGTCCATTCACAGCTAGCACAATCATCGGAGCAACGACCATGGATCAGTTGAAGGAGAACATTGATGCATTTACCAGTGCTCCACGGCCTTTGGCACCGGAAGTTCTTGATGACATCGAATCCCTCTTCAAGAGATACCGAGACCCAACACTTTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MAVSAFTANPSSSHGNTLSGLCSRRPEIWHRRRIGSRIRAQAQSQMQYRKLGDSDLVISEVTLGTMTFGEQNTEKEAHDILSYSFDQGVNILDTAEMYPVPPRKETQGRTDLYIGSWMQSKPRDKIILATKVSGYSERSTFLRDNAKVVRVDAANIKESVEKSLSRLSTDYIDLLQIHWPDRYVPLFGEYCYNPTKWRPSVPFEEQLKAFQELIDEGKVRYIGVSNETSYGVMEFVHAAKVQGLPKIVSIQNSYSLIVRCHFEVDLVEVCHPNNCNVGLLAYSPLAGGVLTGKYIDTNPDISKKSRLNLFPGYMERYNASLAKEATNEYVKLAKKHGLTPVQLALGFVRDRPFTASTIIGATTMDQLKENIDAFTSAPRPLAPEVLDDIESLFKRYRDPTLS</aaseq>

Gene Sequence

<dnaseqindica>1..195#289..384#487..570#971..1131#1857..1974#2313..2448#2750..2928#3089..3328#ATGGCCGTATCTGCATTCACTGCAAACCCATCCTCATCACATGGCAATACCTTATCGGGGTTGTGCTCCCGTCGGCCTGAGATATGGCACAGGAGACGCATCGGCAGCAGAATTCGGGCGCAGGCGCAGTCGCAGATGCAGTATCGGAAGCTGGGAGATTCAGACCTTGTCATCAGTGAGGTCACTCTTGGAACAGTATGTGCATATATAACTGGAGATCATGTTTCCTGCTCTTGTTGTTTTTTACATTTAATTTTACATCCCATGCTAATCCTGCTTTTTGTTCAGATGACATTTGGAGAGCAAAACACGGAGAAGGAAGCGCACGATATTCTTTCTTATTCTTTCGATCAAGGTGTCAATATCCTTGACACAGCAGAAATGGTTAATTAGTACATTCCTTCTGTTTTCTTTTCTCCTGATTTACGGAGCGGCAATTGCTTTAGTTTTTCATTTTGTAACAGCCTTTCTCCATTTCGCCTTTAGTATCCAGTGCCACCCAGAAAAGAGACTCAAGGAAGAACTGATCTATATATAGGCAGTTGGATGCAATCAAAGCCACGAGATAAGGTAACTAAAATAAGCTCTTGCATTTATTATCACATACTAAATTAAGAAAAAATAGGTAGGAACTATGGCATTCGCTAAGAGGAATATGGGCGTTCATGTCAGATATACAATTTGAATCCATGCGTGGGAAGGTTAAACACAGCCTGTCAGCCTCCACAGGATAATAGCTATAGTCACTCAGGAAATTCATCATCTTTATTCAATTTAATATGATCATTCTTTAACTTTGGTGTTTAGGGTCTAGGTAGCATAATTATACTAACTGCAATAAGTTGAAGAGTATAAGTAAATACAACTCAGACTTCACTACGAACAGTTCCCTGAATGTCCAACCGATGATGGAATATCTGACAGTGTTACTGAAACATTGTGTTTGCGTGGTTTGTTTCTGTGCACCTAGATTATTCTAGCCACAAAAGTTTCAGGTTACTCAGAGCGATCTACTTTTCTCCGGGACAATGCGAAAGTAGTTCGTGTTGATGCTGCCAATATCAAGGAAAGTGTCGAAAAGAGTCTTTCCCGCTTATCTACAGACTACATTGATTTACTCCAGATACACTGGTTAGTGCCTTTTTTTTTTCTCGTATAATTTAGACGTCCTTGGCCAGCTTGATTCGCACAATCATTTTCAGAATGCATAACCATTCATCGGATTCTTTCAGCTATCAGTTGTTTATCTACATAGCATATGGAAATGTATATTTCTTTCAAATATTATTTTCCATCTGACGGGTATATACATTATTGCAAGAAGAAAATTTAGTTTATGTATTAACAAGGACATGTGGTGTCCTTTTTACCTACTGTTTCCTGTTGTTCCTGCTACTTTTGATCTTATTGCACTTACCTAGGGATACAAAATATCTTTGGCTCTCAGTGTCTTGTAATTTGCACTTCTCTATTCTTATCTTCCCATACAAGATTTAATACATTATCTTAAATTTTGTCATATATCTGACACCGTGACTACCTAGCAATTTTCCCTTTGGAAAGTATACCAATACAAATAATATATATGACGAAATTAGTGCACATGTGTATTCGAGAAAAAAATGATGAAAATGGAAATTGTAAATTTGAGTTCTCTTTTCACCACTCAATCCATTGCCTGATATAAATTGTTTTAGTGTATCTGCTATCTTAACAGAAATACCGTGAGCTATTTAACTATTCACTTACACTTGTTTAGATAGAAGTTACTCTCGTTATACTTATGTGTTTGAAGTTTCTATCTTCACAACGATGAACAAACAAGACTCATCCAGATGTTTGTTTTATATCTTCAGGCCAGATAGGTATGTTCCACTATTTGGTGAATACTGTTACAACCCAACCAAATGGAGGCCAAGTGTTCCATTTGAGGAACAGTTGAAAGCTTTCCAAGAGCTAATTGATGAAGGAAAGGTAATGCATTTATACTGCATCTTCACTTTTTGCACTTAGAAAGGATTTTCTGTCAGTGAGTGGGACCGGTGGATTACAAGTTTACAACCATGTAGCTTCATGCCTGCCCCTCATATGAGCCACCTTTCAACAGGGCATGACACTTACATCTTTTATCATCCAGTTAAAGATGTGTATTTTTTATAACATATGAGCGCATGTAACTGTTGTCTTGGTAGAGGTGCATTTGACTAGTTTCTAGTTTTTTTTTTTTTTCAAAAACTCACAGCATATTTAGAGTTTGTGAATAATGGCAAGTTGTAAACCATTGTTTAATTTGATTTTAATCACCGTTCTAGGTTCGTTATATTGGTGTTTCCAATGAAACTTCGTATGGAGTGATGGAGTTTGTACATGCTGCAAAGGTTCAAGGACTTCCAAAGATTGTGAGCATCCAGAACAGTTATAGTCTAATTGTGAGATGCCACTTCGAAGGTTAAACTGATAACATTTATCCGTTCACTTTATTCATTGCAAGAGTCTTTCATGCTCTTGGTTCTGAGCTTAAGTATGATATATCTTTGCCATATCTTTTGTTCATAAACATTGGTTACCTTGCCTGTTATCTCCAACAAACATGAGATGCAGATAAACATTCATTGTTAGATAACTTAATTTATTGCTTTTCTTGATTTAAGATAAACCTATTAAGCCCTAGCAAAAGCAAAAATGATTTATACCAGTGTACTGGATTTATTCACATAGTGGACATTCACCAAATTTTGTTTTTGAGCAGTTGACCTTGTTGAAGTGTGCCACCCAAATAACTGTAATGTTGGGTTGCTTGCCTACTCTCCATTGGCTGGAGGTGTTCTCACTGGGAAGTATATTGATACTAACCCTGACATATCAAAGAAGAGCAGGCTAAATCTCTTCCCTGGATACATGGAGCGCTACAATGCATCGTTGGCTAAAGTATGTGTACTCTACTCCATCAAATACTTCAACCAACAAACCAGTTAAATCAAAACATTTTCCGATTCATTTCTCATCTGTCCAGTTTATCAAAATATTTTTTTCTGTTCATTCTCACCCGTATATGGTGACTTGCTAATTGGTGCATTTGTTTTGACAGGAAGCAACGAATGAATATGTCAAGCTTGCCAAGAAGCACGGCCTAACTCCAGTCCAGCTTGCACTGGGCTTTGTGCGTGACCGTCCATTCACAGCTAGCACAATCATCGGAGCAACGACCATGGATCAGTTGAAGGAGAACATTGATGCATTTACCAGTGCTCCACGGCCTTTGGCACCGGAAGTTCTTGATGACATCGAATCCCTCTTCAAGAGATACCGAGACCCAACACTTTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013117

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013117&oldid=57940"