Os12g0482500

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0482500| Description = Conserved hypothetical protein| Version = NM_001073306.1 GI:115488573 GeneID:4352221| Length = 3435 bp| Definition ...")
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Gene Name

Os12g0482500

Description

Conserved hypothetical protein

Version

NM_001073306.1 GI:115488573 GeneID:4352221

Length

3435 bp

Definition

Oryza sativa Japonica Group Os12g0482500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17923993..17927427

Sequence Coding Region

17924199..17925085,17926823..17927210

Expression

GEO Profiles:Os12g0482500

Genome Context

<gbrowseImage1> name=NC_008405:17923993..17927427 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:17923993..17927427 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcgggagctcatcgccgtggtggcgcgcgcggcgctgcagtgggcgctgtcgtcgctgctgctcgccaacggcgccgccttctgcctcatcgccgccgcggcgtcgtggctccgcctcggcccgccgctgtgcctactctgcgccggcgtccaccggcttctctgctccgcccccgccgcggccgacgccgacgacgcgcgcggccaagaacgcgcggcgttccgacgactcctctgcgacgcccacgtcgccgccatggccgcctcggagccggagaagaagaagcagcagcagcagccggatcagcagaagatgatctctgcttctgatggagaagagaagagagatgcagcagaggttgaaattgcagacaaacctggaggtatggagggtcaccgcgtcgtctccatcggcagcgagatctgcgagcaggaccacgccggcggcgaccagcgctccaccgccggcgaagaaggctacggcgacggcccttacgtctccctcttcgagctcgcgcccattgcggcgcgcgccccgcaggacgaggacggacacggcaatgcccacgaggtgttcgacgacctgccggccgagctgcggcgcgacggcgacggcgcgctgaccgtgggcaggctcgcggcggcgctccgggcgcagcggagggagctggacgccgttcgcgcggagctcgacggcgagcggcgcgcgtgcgcggaggcggcggagtaccagcggcagctggaggagcagggggagttcgaccgggaggcggtgcgcctcgccatgcagctcgtccacgaggccgagacggagaagcacgcgctgcagcgccagctcgacgcgttccgggtcaaggcccatctctacgactacgaggccgccgccaccgccgccgccgccacggaccacgacgcggccggcgacggcggcggcggcaacaactaccagtcgctggtggacttcttgccggggtcggtgttctcctcctcgccggacctggccaacctgctcaagctctacaccgagggcaatggcggcggccgtcgactgaccgacgcgccggtgccggtggtcaccgaggtggttgaggaagaagaggaggaggaggaggaggaggaggaggaggaggaggaggaagtcgccgtcgcggccatcggtggcgtggattcgaacgggaacggtgatgctgccgccaccatcgccatcgccggcgattctttgcaggaaggaagcagtgatcacctcgaacccacaaacggtgaattgtga</cdnaseq>

Protein Sequence

<aaseq>MVRELIAVVARAALQWALSSLLLANGAAFCLIAAAASWLRLGPP LCLLCAGVHRLLCSAPAAADADDARGQERAAFRRLLCDAHVAAMAASEPEKKKQQQQP DQQKMISASDGEEKRDAAEVEIADKPGGMEGHRVVSIGSEICEQDHAGGDQRSTAGEE GYGDGPYVSLFELAPIAARAPQDEDGHGNAHEVFDDLPAELRRDGDGALTVGRLAAAL RAQRRELDAVRAELDGERRACAEAAEYQRQLEEQGEFDREAVRLAMQLVHEAETEKHA LQRQLDAFRVKAHLYDYEAAATAAAATDHDAAGDGGGGNNYQSLVDFLPGSVFSSSPD LANLLKLYTEGNGGGRRLTDAPVPVVTEVVEEEEEEEEEEEEEEEEEVAVAAIGGVDS NGNGDAAATIAIAGDSLQEGSSDHLEPTNGEL</aaseq>

Gene Sequence

<dnaseqindica>2343..3229#218..605#ctgtttagtggtgctccatttgcaatgtttgacacttgatcatcccaatgatcacctcctccacccacctacccccaaattcctcatgctcctcctcgatccttaattccatctcctctccgttttcttgattaaatcctacgaaatcctggcaaatttccagcctttctttctgctgaatttcgcttgatcctgagctgagctgagctccggccacatggtgcgggagctcatcgccgtggtggcgcgcgcggcgctgcagtgggcgctgtcgtcgctgctgctcgccaacggcgccgccttctgcctcatcgccgccgcggcgtcgtggctccgcctcggcccgccgctgtgcctactctgcgccggcgtccaccggcttctctgctccgcccccgccgcggccgacgccgacgacgcgcgcggccaagaacgcgcggcgttccgacgactcctctgcgacgcccacgtcgccgccatggccgcctcggagccggagaagaagaagcagcagcagcagccggatcagcagaagatgatctctgcttctgatggagaagagaagagagatgcagcagaggttgaaattgcagacaaacctggaggtaatcaatctatgaatatccttcaattttccaattcgaaactactactggtgtgaaattgcaaaacaatcgtgttatgcgtgtcgctttggagaaaaaaatgttgaattcggtcaggttcaggtcattgctgatgcaataaccaagaattagagtgaagctttgctagtagtaggtttgattggttggtcactttgtagaatggcattggtatcatttcatcttttggttggtgcaacctttactagttgagctttcacaacatgacattggtaggaatttttagggataaaaagttggggccttggaaaacaaacatttcatagtagactgatcctgaaaggctgaaagtgattcaatgatcaaccacataaaaatgcattgccacatttttaaatagatggtgtagttagatatcaaaatcttcaacattaatagacgcgctaggattttagatttgaaaatgatattagtacatttttcatggaacacacttttatatatttatgtttaatatttgtatagcaattctgtccagattcgtagtaataggatatatcacatgtaagcaaaagttgctatattttgggacggagggagtagttaacttcaaaggtactttttaattttttaaagtaccgtaaaatttctcaataatgaaacgtgtgtgcacagtagattatgttgatatccaaaatgtcaacagagatattaattactattccctccaatttataatataagacacaactagtttttttctagatatttcataatataaggcgtgtatacatacatgtaattaattaacacatcttctccactaaattatttgtattattttaaatcctctactctcaagatttctagttttattgggtgatccaaaatagtagataataataattgtttttttccttcaggttaagaatggttgtaccttatattattatggaaaagagggtgtagaagggagtaagaatgaagtgaacacaacatttgcatctgtcaacttcaatatctggaactttctgtaattacacgctaaaaggcgtgttcgttttgaatgtaggaatttcacatgaaatgtgaacttttaaatctcccataggtatcgtgaacagatcagtgttctgaatggttctgaatgggcttaaattctactccatccatcctaaaatataattatttttagcgtagtgtcaagtcaagcatttttaactttgactattaatagaaaaaaaatcacgtaaaattgatgttattagatttatcattaaacaaactatcataatatataattatttttatttaaaacattttacttttaaaaatattgttggtcaaagtagcgtctcaaatattattaaaaaatatttatattttaggacggagggagtagtagtaaagattatcaaactgataccaacacttatcatggcattcgagttattagagagtttattacgttattctcttggagcagttacgttttactatcaaaattcgaccaaatttgaaggtgtgcggaattttagtctggttaaaagaatcacatgactggaatgtctagagacgcggcgagatctctcaccaagaaactgatccatgagtttaagcaaaattggtcattacaaatttataatcaagaaaatctacaaaattactgttgttaattcccttgaactactgtcatcaagaaagattggtttgttgatgatggacatgtgttcgcaggtatggagggtcaccgcgtcgtctccatcggcagcgagatctgcgagcaggaccacgccggcggcgaccagcgctccaccgccggcgaagaaggctacggcgacggcccttacgtctccctcttcgagctcgcgcccattgcggcgcgcgccccgcaggacgaggacggacacggcaatgcccacgaggtgttcgacgacctgccggccgagctgcggcgcgacggcgacggcgcgctgaccgtgggcaggctcgcggcggcgctccgggcgcagcggagggagctggacgccgttcgcgcggagctcgacggcgagcggcgcgcgtgcgcggaggcggcggagtaccagcggcagctggaggagcagggggagttcgaccgggaggcggtgcgcctcgccatgcagctcgtccacgaggccgagacggagaagcacgcgctgcagcgccagctcgacgcgttccgggtcaaggcccatctctacgactacgaggccgccgccaccgccgccgccgccacggaccacgacgcggccggcgacggcggcggcggcaacaactaccagtcgctggtggacttcttgccggggtcggtgttctcctcctcgccggacctggccaacctgctcaagctctacaccgagggcaatggcggcggccgtcgactgaccgacgcgccggtgccggtggtcaccgaggtggttgaggaagaagaggaggaggaggaggaggaggaggaggaggaggaggaggaagtcgccgtcgcggccatcggtggcgtggattcgaacgggaacggtgatgctgccgccaccatcgccatcgccggcgattctttgcaggaaggaagcagtgatcacctcgaacccacaaacggtgaattgtgaatcttgggattaatacaaccttgtcaatatatacatatcatgtaattatatttgactagcaaaagtgcccgtgcgttgcaccgggtgattacagagtgtgtatattgaccaaaagtgttgtttggtttagcaaaagtgcccgtgcgttgcaccgggaagtttacagatcagaaaaatatgcaattaattaaaatacaaattcgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0482500, RefSeq:Os12g0482500