BGIOSGA013188

From RiceWiki
Revision as of 09:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013188| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013188, complete gene.| tag = OsI_127...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013188

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013188, complete gene.

LocusTag

OsI_12742

Ensembl Transcript ID

BGIOSGA013188-TA

Ensembl Protein ID

BGIOSGA013188-PA

Length

2627

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28273679..28276305

Sequence Coding Region

28273679..28274965,28275016..28276305

Genome Context

<gbrowseImage1> name=IndicaChromosome03:28273679..28276305 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:28273679..28276305 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCATCGCCGTGTCCTACGGCGAGGACGGCCCCGTGTTCTGCGGGCTCAACTCGGATGGTTCTCACTTGGTCACCTGCTTCGGCGCGGATGCCTCCGTTGTGTACGGTGCCCCCAGCAGGATCCCGTTCGTAGGGGTTACTGCGGGGGATGGGTTTGCCTGTGGCCTATTGCTCGACACCAATCAGCCTTACTGCTGGGGGAGCAACTCCTATGTCAAGATTGGTGTGCCGCAGCCGATGGTCGAGGGAGCCATGTACTCGGAGCTCAGTGCAGGAGACAACCACCTTTGTGCCCTACGAACATCTGTCAAGGGGTTTCACAGCGTGAATGGAGATACATCGGTGATTGATTGCTGGGGATACAACATGACCGCCACACATACCGTCACCGGAGCTGTATCGGCCATTTCAGCTGGTTCTGTGTTCAATTGCGGCTTATTTGCACGGAACAGGACGGTTTTCTGCTGGGGCGATGAATCGGTTAGTGGTGTCATTGGGCTAGCTCCGAGGAATGTGCGGTTCCAGTCTATAGGAGCAGGTGGTTACCATGTCTGCGGGGTGCTGGAGAATGCGCAGGTATTCTGCTGGGGTAGGAGCTTGGAGATGCAGCAGATGTCAACACCCAGTTCTACTGATGATGGTGATGTGAACATAGTTCCGATGGATGCAATGGTCTCCGTGGTCGGTGGGCGGTTCCATGCTTGTGGCATCAGGAGTCTTGATCACCAAGTGGCTTGCTGGGGCTTCACACTTCAGAACAGTACACTTGCACCAAAAGGGCTCAGAGTTTATGCAATTGTGGCTGGAGATTACTTCACTTGTGGGGTGCCGGCCGAGACATCGTTGAAGCCAATGTGCTGGGGGCATAGTGGCCCATTAGCACTACCAATGGCGGTATCCCCTGGGATTTGTGTATCTGATTCATGCAGCCATGGCTACTATGAATACGCAAACCATGGTGAAGTTGGCAGTGGTAGCAAGACATGTAAACCTGCAAATTCTAGACTCTGCTTGCCCTGCAGTGTTGGTTGCCCAGATGACTCATATGAGTCATCACCTTGCAATGCCACAGCTGACCGTGTTTGCCAGTTTGATTGCTCAAAGTGTGCCTCAGATGAGTGCGTGTCATTTTGTTTGTCCCAGAAACGGACCAAGAACCGCAAGTTCATGGCTTTTCAGCTGCGTATTTTTGTGGCAGAGATTGCATTTGCCGTCATATTGGTGTTCAGTGTGACCGCTATTGCTTGCCTGTATGTCCGGTACAACTTCGACATTGCCAGTGACAACATGAAGATTCAGCCTGATGTAGAGGACTTGAAGATCAGGAGAGCTCAGGAATTCTCATACGAGGAGTTAGAGCAAGCAACAGGGGGCTTCTCAGAGGATTCACAAGTTGGCAAAGGCAGCTTTTCATGTGTGTTCAAGGGCATTCTGAGGGATGGTACAGTTGTTGCCGTGAAGCGTGCAATTAAGGCATCAGATGTGAAGAAGAGCTCAAAAGAGTTCCATACCGAGCTTGACCTCCTCTCCAGGCTCAACCATGCGCACTTGCTGAACCTGCTTGGCTATTGTGAGGATGGCAGCGAGAGGCTCTTGGTTTATGAGTTCATGGCTCATGGATCCCTCTATCAGCATCTTCATGGCAAGGATCCGAACTTGAAGAAGAGACTGAATTGGGCCAGGCGGGTCACTATTGCTGTCCAAGCTGCTCGGGGGATCGAGTACTTGCATGGCTATGCTTGCCCACCAGTAATTCACCGAGACATCAAGTCCTCAAACATACTGATAGATGAGGATCACAATGCGCGTGTCGCTGACTTTGGTCTATCTATATTGGGCCCAGCAGATAGTGGTACCCCACTATCAGAGCTGCCTGCAGGGACACTTGGCTACCTTGATCCTGAGTACTACCGTCTGCATTACTTGACAACAAAATCTGATGTGTATAGCTTCGGAGTTGTTCTTCTAGAGATCCTAAGTGGCAGGAAAGCTATTGACATGCAGTTTGAGGAAGGAAACATTGTTGAATGGGCAGTACCATTGATCAAAGCTGGAGACATTTCTGCCCTTCTTGATCCTGTCTTATCTCCTCCCTCTGATCTTGAGGCTCTCAAGAAGATCGCTGCTGTGGCATGCAAGTGTGTCAGAATGCGAGCCAAAGACCGCCCTTCCATGGATAAGGTAACAACAGCTCTAGAGCGTGCCCTTGCACTGCTGATGGGTAGCCCGTGCATTGAGCAACCTATTCTGCCAACTGAGGTTGTTCTTGGGAGTAGCAGGATGCACAAGAAGGTATCGCAGAGGTCATCTAACCATTCGTGCTCCGAGAATGATCTCGTTGACGGGGACGATCAGCGGATTGAGTACAGAGCACCATCTTGGATAACATTTCCAAGTGTGACTTCATCTCAGAGGAGGAAATCCTCGGCATCTGAAGCTGACATGGATGGACGAACAACCACAGATGGAAGGAACGTCGGGAGCAGCATAGGTGATGGATTGCGGTCGCTGGAGGAAGAAATCAGCCCGGCCTCACCGCAGGAAAACCTGTACTTGCAGCACAACTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MASIAVSYGEDGPVFCGLNSDGSHLVTCFGADASVVYGAPSRIPFVGVTAGDGFACGLLLDTNQPYCWGSNSYVKIGVPQPMVEGAMYSELSAGDNHLCALRTSVKGFHSVNGDTSVIDCWGYNMTATHTVTGAVSAISAGSVFNCGLFARNRTVFCWGDESVSGVIGLAPRNVRFQSIGAGGYHVCGVLENAQVFCWGRSLEMQQMSTPSSTDDGDVNIVPMDAMVSVVGGRFHACGIRSLDHQVACWGFTLQNSTLAPKGLRVYAIVAGDYFTCGVPAETSLKPMCWGHSGPLALPMAVSPGICVSDSCSHGYYEYANHGEVGSGSKTCKPANSRLCLPCSVGCPDDSYESSPCNATADRVCQFDCSKCASDECVSFCLSQKRTKNRKFMAFQLRIFVAEIAFAVILVFSVTAIACLYVRYNFDIASDNMKIQPDVEDLKIRRAQEFSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHTELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEGNIVEWAVPLIKAGDISALLDPVLSPPSDLEALKKIAAVACKCVRMRAKDRPSMDKVTTALERALALLMGSPCIEQPILPTEVVLGSSRMHKKVSQRSSNHSCSENDLVDGDDQRIEYRAPSWITFPSVTSSQRRKSSASEADMDGRTTTDGRNVGSSIGDGLRSLEEEISPASPQENLYLQHNF</aaseq>

Gene Sequence

<dnaseqindica>1..1287#1338..2627#ATGGCGTCCATCGCCGTGTCCTACGGCGAGGACGGCCCCGTGTTCTGCGGGCTCAACTCGGATGGTTCTCACTTGGTCACCTGCTTCGGCGCGGATGCCTCCGTTGTGTACGGTGCCCCCAGCAGGATCCCGTTCGTAGGGGTTACTGCGGGGGATGGGTTTGCCTGTGGCCTATTGCTCGACACCAATCAGCCTTACTGCTGGGGGAGCAACTCCTATGTCAAGATTGGTGTGCCGCAGCCGATGGTCGAGGGAGCCATGTACTCGGAGCTCAGTGCAGGAGACAACCACCTTTGTGCCCTACGAACATCTGTCAAGGGGTTTCACAGCGTGAATGGAGATACATCGGTGATTGATTGCTGGGGATACAACATGACCGCCACACATACCGTCACCGGAGCTGTATCGGCCATTTCAGCTGGTTCTGTGTTCAATTGCGGCTTATTTGCACGGAACAGGACGGTTTTCTGCTGGGGCGATGAATCGGTTAGTGGTGTCATTGGGCTAGCTCCGAGGAATGTGCGGTTCCAGTCTATAGGAGCAGGTGGTTACCATGTCTGCGGGGTGCTGGAGAATGCGCAGGTATTCTGCTGGGGTAGGAGCTTGGAGATGCAGCAGATGTCAACACCCAGTTCTACTGATGATGGTGATGTGAACATAGTTCCGATGGATGCAATGGTCTCCGTGGTCGGTGGGCGGTTCCATGCTTGTGGCATCAGGAGTCTTGATCACCAAGTGGCTTGCTGGGGCTTCACACTTCAGAACAGTACACTTGCACCAAAAGGGCTCAGAGTTTATGCAATTGTGGCTGGAGATTACTTCACTTGTGGGGTGCCGGCCGAGACATCGTTGAAGCCAATGTGCTGGGGGCATAGTGGCCCATTAGCACTACCAATGGCGGTATCCCCTGGGATTTGTGTATCTGATTCATGCAGCCATGGCTACTATGAATACGCAAACCATGGTGAAGTTGGCAGTGGTAGCAAGACATGTAAACCTGCAAATTCTAGACTCTGCTTGCCCTGCAGTGTTGGTTGCCCAGATGACTCATATGAGTCATCACCTTGCAATGCCACAGCTGACCGTGTTTGCCAGTTTGATTGCTCAAAGTGTGCCTCAGATGAGTGCGTGTCATTTTGTTTGTCCCAGAAACGGACCAAGAACCGCAAGTTCATGGCTTTTCAGCTGCGTATTTTTGTGGCAGAGATTGCATTTGCCGTCATATTGGTGTTCAGTGTGACCGCTATTGCTTGCCTGTATGTCCGGTACAACTTCGACATTGCCAGTGTTCAGAATGAGTGAGGCTGGCAAAGAATACAACATATTCTTTCCGGAAGGACAACATGAAGATTCAGCCTGATGTAGAGGACTTGAAGATCAGGAGAGCTCAGGAATTCTCATACGAGGAGTTAGAGCAAGCAACAGGGGGCTTCTCAGAGGATTCACAAGTTGGCAAAGGCAGCTTTTCATGTGTGTTCAAGGGCATTCTGAGGGATGGTACAGTTGTTGCCGTGAAGCGTGCAATTAAGGCATCAGATGTGAAGAAGAGCTCAAAAGAGTTCCATACCGAGCTTGACCTCCTCTCCAGGCTCAACCATGCGCACTTGCTGAACCTGCTTGGCTATTGTGAGGATGGCAGCGAGAGGCTCTTGGTTTATGAGTTCATGGCTCATGGATCCCTCTATCAGCATCTTCATGGCAAGGATCCGAACTTGAAGAAGAGACTGAATTGGGCCAGGCGGGTCACTATTGCTGTCCAAGCTGCTCGGGGGATCGAGTACTTGCATGGCTATGCTTGCCCACCAGTAATTCACCGAGACATCAAGTCCTCAAACATACTGATAGATGAGGATCACAATGCGCGTGTCGCTGACTTTGGTCTATCTATATTGGGCCCAGCAGATAGTGGTACCCCACTATCAGAGCTGCCTGCAGGGACACTTGGCTACCTTGATCCTGAGTACTACCGTCTGCATTACTTGACAACAAAATCTGATGTGTATAGCTTCGGAGTTGTTCTTCTAGAGATCCTAAGTGGCAGGAAAGCTATTGACATGCAGTTTGAGGAAGGAAACATTGTTGAATGGGCAGTACCATTGATCAAAGCTGGAGACATTTCTGCCCTTCTTGATCCTGTCTTATCTCCTCCCTCTGATCTTGAGGCTCTCAAGAAGATCGCTGCTGTGGCATGCAAGTGTGTCAGAATGCGAGCCAAAGACCGCCCTTCCATGGATAAGGTAACAACAGCTCTAGAGCGTGCCCTTGCACTGCTGATGGGTAGCCCGTGCATTGAGCAACCTATTCTGCCAACTGAGGTTGTTCTTGGGAGTAGCAGGATGCACAAGAAGGTATCGCAGAGGTCATCTAACCATTCGTGCTCCGAGAATGATCTCGTTGACGGGGACGATCAGCGGATTGAGTACAGAGCACCATCTTGGATAACATTTCCAAGTGTGACTTCATCTCAGAGGAGGAAATCCTCGGCATCTGAAGCTGACATGGATGGACGAACAACCACAGATGGAAGGAACGTCGGGAGCAGCATAGGTGATGGATTGCGGTCGCTGGAGGAAGAAATCAGCCCGGCCTCACCGCAGGAAAACCTGTACTTGCAGCACAACTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013188

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013188&oldid=58011"