BGIOSGA013190

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Revision as of 09:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013190| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013190, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013190

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013190, complete gene.

LocusTag

OSJNBA0066H15.6

Ensembl Transcript ID

BGIOSGA013190-TA

Ensembl Protein ID

BGIOSGA013190-PA

Length

3029

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28310911..28313939

Sequence Coding Region

28310911..28311167,28311565..28311802,28312326..28312860,28312946..28313148,28313730..28313939

Genome Context

<gbrowseImage1> name=IndicaChromosome03:28310911..28313939 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:28310911..28313939 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAACATACACTACGGATGAAGCGCTTGAATTCATGGGGTTTGGGAAATTCCAACTACTTGTGCTTGCATATGCAGGCATGGGTTGGGTCGTAGAGTCCATGGAAATTATGCTATTGTCATTTGTTGGGCCACTGGTGCGGGAGGAATGGAACATTTCTGCTGAAAATGAGAGTCTGCTCTCAAGTGTAGTGTTTGCTGGTATGCTAATAGGAGCTTCTGGTTGGGGTTTTGTGTCTGACAAATATGGAAGAAGGATTTGCTTACTATTTTCAACCATGTTTGCCAGTGGAATGGGTTTTCTAAGTGCTTTCTCTCCTAATTATTCATGCTTGCTGGCTCTACGTTTTCTCGTTGGCATAGGAGTGGGTGGTGCACATGTGTTTACATCTTGGTTTTTGGAGTTTGTTCCTGCACAAAATCGTGGCACTTGGATGGTTATTTTTTCCTGTTTCTGGACTATTGGCACCATCTTGGAGGCTTCACTTGCATGGGTTGTTATATCAGTATTGAGTTGGAGGTGGTTGCTAGCATTGACTGCACTTCCATGCTCTCTCTTGATTCCATTCTTTGGAACTACACCTGAGTCACCGCGCTATTTATGTGTGCAAAATAGAACATCTGATGCAATGCTTGTCCTGGAGAGAATTGCTATAACAAACCAAGCAGCTCTTCCTCCTGGAGTTCTCATATACCATCAGGAAGCAAAAGTTGACCACAGTGATCTTACTTCTGAGAAAGAAGATCTCCTCCCAGTCAGCGAGAAGGAATGCACATTTGACAATGCCATGAGCTTCAAATATGGTGGTGGCATTGCTGCATTGCTCAGGCTATTGTCACGCAAATTGCTAAGATCAACTCTTCTTCTTTGGTTTGCTTTCTTCGCAAATTCATTTGCTTATTATGGGCTAGTATTGTTGACCGCACAACTAAGCGATGCAAATAGAAGCTGCACATCTGGGCAAACAAATGTAGTGCCACAGAAAGATGTTAACCTTTACAAAGATACATTCATTACTAGTTTAGCAGAGGTTCCTGGCCTGATTTTATCTGCTGTTCTTGTTGACTGGTTTGGCCGAAAAGCTTCGATGTGGTTCATGTTATTCCATTGCTGTGCTTTCATCGGACCACTTGTGCTTCAGCAGAATGAGCTGTTGACAACTGTCCTTCTATTTGGTGCCCGCGCCGTTGCGATGGGTAGCTTCACAGTTTTATGTTTATATGCCCCAGAGGTTTATCCAACATCTGCGCGCTCAACCGGTGTTGGCATCGCTACCGCTATTGGCAGAATCGGTGGGGTTGTTTGCCCTCTTGTCGCCGTTGGCATGTTGAGAAGCTGCCACCAGATGGAAGCCATCCTTGTTTTTGAGCTGGTTTTATTCCTTGCTGGAGTTGCTTGCTTTCTCTTCCCTATTGAGACTAAAGGGCGTGGAATGGATTGA</cdnaseq>

Protein Sequence

<aaseq>METYTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLSSVVFAGMLIGASGWGFVSDKYGRRICLLFSTMFASGMGFLSAFSPNYSCLLALRFLVGIGVGGAHVFTSWFLEFVPAQNRGTWMVIFSCFWTIGTILEASLAWVVISVLSWRWLLALTALPCSLLIPFFGTTPESPRYLCVQNRTSDAMLVLERIAITNQAALPPGVLIYHQEAKVDHSDLTSEKEDLLPVSEKECTFDNAMSFKYGGGIAALLRLLSRKLLRSTLLLWFAFFANSFAYYGLVLLTAQLSDANRSCTSGQTNVVPQKDVNLYKDTFITSLAEVPGLILSAVLVDWFGRKASMWFMLFHCCAFIGPLVLQQNELLTTVLLFGARAVAMGSFTVLCLYAPEVYPTSARSTGVGIATAIGRIGGVVCPLVAVGMLRSCHQMEAILVFELVLFLAGVACFLFPIETKGRGMD</aaseq>

Gene Sequence

<dnaseqindica>1..257#655..892#1416..1950#2036..2238#2820..3029#ATGGAAACATACACTACGGATGAAGCGCTTGAATTCATGGGGTTTGGGAAATTCCAACTACTTGTGCTTGCATATGCAGGCATGGGTTGGGTCGTAGAGTCCATGGAAATTATGCTATTGTCATTTGTTGGGCCACTGGTGCGGGAGGAATGGAACATTTCTGCTGAAAATGAGAGTCTGCTCTCAAGTGTAGTGTTTGCTGGTATGCTAATAGGAGCTTCTGGTTGGGGTTTTGTGTCTGACAAATATGGAAGAAGGTGATGATTGACTCTATGCAAGCTTACATGTTTCAGTTTTCTGGTACAATTAGGAGCTTTAACCACTTCAAATCTGCTGTTTTGAATTTGATTTACATTTCCCTGATCTCTAGCTGTTCAACTCTTGAATATGTGTCCTTGTTTCGATCTCTCTGTTACATAACTGATAACTCCGATACAAACCTATATCATAGGTTAGTATTTGCATTAGTGTAAAGCCTCTGAATTCTGGAAGCCTAAGTTGTGTTTTTATAAGAATTTATCAATGAACTCAAACTTCAAAGGAAAGTTGAGGCTACAAAAGAGTCTCCACTGTACATCCATTCTAATTATGTACTTGTTTTATTTCCTCCTTTACGATCATGGATGATATAAAGCATTATGTATCTTATTTCAGGATTTGCTTACTATTTTCAACCATGTTTGCCAGTGGAATGGGTTTTCTAAGTGCTTTCTCTCCTAATTATTCATGCTTGCTGGCTCTACGTTTTCTCGTTGGCATAGGAGTGGGTGGTGCACATGTGTTTACATCTTGGTTTTTGGAGTTTGTTCCTGCACAAAATCGTGGCACTTGGATGGTTATTTTTTCCTGTTTCTGGACTATTGGCACCATCTTGGAGGCTTCACTTGCATGGGTATGGCACCCTTTGTTGTCCTTTGTGGCTTATAGCTTTCACCTTTTCATGCTAAACTTGTTTGTCTACTGAAGGTGCATTCTGTATGTTAAGGAAAGGATAAGTAAAAGCCACAAATAATGCATGTATTTGGTTTCAAGAACATAGTCTAGGCTGATTTCTGAAACCAGTGCCACATGAAAAATCAAAATGCTGCATCAAATGGAGAATGATGTCTGTTTGTTCAGGTTATGCGTGTGGACTATTTGTGTGAGCACGTTAATCATTTTCGTACTTTTGTTGCAGTATCTGTATGACTAATAACTATTTTGTACTCTCTGATATCATACTTCTACCTTCTTATTTCAACTCTGAATTATCTAATTCAACGCAAAAAAAAACCTGATTTCTTAACAAATGAAAACCAAAACAGAAGATGTTCGATTGAGCAACGGAGTGATAGGTTTTTGATTTTGTAGTTCTTATTTTATTTTTCATAAGCATATATTTTAAGAAATTATATTTAATAATATCCCTTTTGCAGGTTGTTATATCAGTATTGAGTTGGAGGTGGTTGCTAGCATTGACTGCACTTCCATGCTCTCTCTTGATTCCATTCTTTGGAACTACACCTGAGTCACCGCGCTATTTATGTGTGCAAAATAGAACATCTGATGCAATGCTTGTCCTGGAGAGAATTGCTATAACAAACCAAGCAGCTCTTCCTCCTGGAGTTCTCATATACCATCAGGAAGCAAAAGTTGACCACAGTGATCTTACTTCTGAGAAAGAAGATCTCCTCCCAGTCAGCGAGAAGGAATGCACATTTGACAATGCCATGAGCTTCAAATATGGTGGTGGCATTGCTGCATTGCTCAGGCTATTGTCACGCAAATTGCTAAGATCAACTCTTCTTCTTTGGTTTGCTTTCTTCGCAAATTCATTTGCTTATTATGGGCTAGTATTGTTGACCGCACAACTAAGCGATGCAAATAGAAGCTGCACATCTGGGCAAACAAATGTAGTGCCACAGAAAGATGTTAACCTTTACAAAGATACATTCATTACTAGTTTAGCAGGTATCGTACCTTAATTCTGTTTCTTCACATAACATGACTGGCTACAGTACATTCCACTAGCTCATCGCTCTACTACTCTTAACAGAGGTTCCTGGCCTGATTTTATCTGCTGTTCTTGTTGACTGGTTTGGCCGAAAAGCTTCGATGTGGTTCATGTTATTCCATTGCTGTGCTTTCATCGGACCACTTGTGCTTCAGCAGAATGAGCTGTTGACAACTGTCCTTCTATTTGGTGCCCGCGCCGTTGCGATGGGTAGCTTCACAGTTTTATGTTTATATGCCCCAGAGGTTTGTATCAACTTGTTATGACATATAGTTAATGTGTCTTTATTGGTCGCTAGGTTACATAGTCTCTGCTTTATTAATCTGTAGAAAATATCATCCAGTAGGCAGCTAATCCATATAGCCAATGTATTTTGGCTTGTAATTTTGAATATTCAATCCTCAATATTTTCCTTCTATTATGTTGGCATGATCTCGGCCGGCAATGCCGGCAGGCAAAAAGAGAAATGAAAATGTTCTAGGTGTAGGTAGTCACTATTACAAAATTAAGACACATTGTTTTTGTAAAATCACTCGTGTGAACACTGAACACAAACGCCATTCCATTATAACTGACTTCAGTGGAGTTCTGCCAGGTCCCTGTTTCTGGTCCATCTCAGTGACCAAAATCGATACCAATCGTGCTATGCGATCTGTTTATATTCATTTTTTAGCTAAACTAATTTGTCAAAACTCTAGCTGATAACCCGGAGTATTATGAGTTATGAGAAAGATGCATCGTCTTTCAACATGTGTATTACACAATTTTTTTTCTCCTTCCAGCAGAGCTTATGTACCATGATCTAATTCCATTTCCTTACTTTTAGGTTTATCCAACATCTGCGCGCTCAACCGGTGTTGGCATCGCTACCGCTATTGGCAGAATCGGTGGGGTTGTTTGCCCTCTTGTCGCCGTTGGCATGTTGAGAAGCTGCCACCAGATGGAAGCCATCCTTGTTTTTGAGCTGGTTTTATTCCTTGCTGGAGTTGCTTGCTTTCTCTTCCCTATTGAGACTAAAGGGCGTGGAATGGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013190