BGIOSGA013225

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Revision as of 09:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013225| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013225, complete gene.| tag = OS03G06...")
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Gene Name

BGIOSGA013225

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013225, complete gene.

LocusTag

OS03G0650400

Ensembl Transcript ID

BGIOSGA013225-TA

Ensembl Protein ID

BGIOSGA013225-PA

Length

5257

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29091780..29097036

Sequence Coding Region

29091780..29091827,29093205..29093364,29093489..29093565,29093697..29094796,29094910..29094994
,29095441..29095503,29095672..29095734,29095933..29096016,29096103..29096693
,29096908..29097036

Genome Context

<gbrowseImage1> name=IndicaChromosome03:29091780..29097036 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:29091780..29097036 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCGGAGGGTTCTACGAGATCGACCACGAGAAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCGGCTACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTCTCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGCAACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTGATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCTCTATGACTTCTCCGCGTCGTCACCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCAGCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGCCGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTCGATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGACTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGGAAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCCAAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGCGACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGCCTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGCAGGCTCTGCGGGAGGAAGCCCGCAAGCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCAAGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATGCGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGGCTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGTCCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTGATGGTGTAAAAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAACAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGAGAAGTATCAGAAGTTGATGAAGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGACATGTATGAGCATCTGGTTCAGAAAAAGGGTAAGCTGAAGAAGGAGGTGCTGTCCTTGAAGGATAAATACAAGCTTGTGCTGGAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTTCTTTGAAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAAGGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTGATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGAGGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCACACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCGCCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCCTCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACGTGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTGCCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCGCCGCTGGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGGACTCCTCGTCGCCGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCGATGGAGACTGCCGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCTACTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAPALAAAHLLDSPMRPQVSRYYSKKRGSSHSRNGKDDANHDESKNQSPGLPLSRQSLSSSATHTYHTGGFYEIDHEKLPPKSPIHLKSIRVVKVSGYTSLDVTVSFPSLLALRSFFSSSPRSCTGPELDERFVMSSNHAARILRRRVAEEELAGDVMHQDSFWLVKPCLYDFSASSPHDVLTPSPPPATAQAKAPAASSCLLDTLKCDGAGWGVRRRVRYIGRHHDASKEASAASLDGYNTEVSVQEEQQQRLRLRLRLRQRREQEDNKSTSNGKRKREEAESSMDKSRAARKKKAKTYKSPKKVEKRRVVEAKDGDPRRGKDRWSAERYAAAERSLLDIMRSHGACFGAPVMRQALREEARKHIGDTGLLDHLLKHMAGRVPEGSADRFRRRHNADGAMEYWLEPAELAEVRRLAGVSDPYWVPPPGWKPGDDVSAVAGDLLVKKKVEELAEEVDGVKRHIEQLSSNLVQLEKETKSEAERSYSSRKEKYQKLMKANEKLEKQVLSMKDMYEHLVQKKGKLKKEVLSLKDKYKLVLEKNDKLEEQMASLSSSFLSLKEQLLLPRNGDNLNMERERVEVTLGKQEGLVPGEPLYVDGGDRISQQADATVVQVGEKRTARKSSFRICKPQGTFMWPHMASGTSMAISGGGSSSCPVASGPEQLPRSSSCPSIGPGGLPPSSRAPAEVVVASPLDEHVAFRGGFNTPPSASSTNAAAAAKLPPLPSPTSPLQTRALFAAGFTVPALHNFSGLTLRHVDSSSPSSAPCGAREKMVTLFDGDCRGISVVGTELALATPSYC</aaseq>

Gene Sequence

<dnaseqindica>1..48#1426..1585#1710..1786#1918..3017#3131..3215#3662..3724#3893..3955#4154..4237#4324..4914#5129..5257#ATGGCGGCTCCTGCGCTTGCGGCAGCTCATCTGCTGGACTCGCCCATGGTACAGACGCGCATCTTCGCTGACACTTCTTTCCTTGCGCCTTTTTTTTTTCAATTTCCATCTCCTCGCCTGGTTAGTTTCATTTCATTGATCGCATATGCTCAGTGTGTACGAGTTGCTTTTGCTGATTAAAATTCGATCGGTGGGGGTGAGTGTTTGGGGGGTTTAGATGGTTTGCTATTTGGATGCAGTTGCATGGTTGTGTGGATTTCTCTACCAATGAATGTCTTAGTAGTAATTGGATCAGTACACTTAATGCAGCTGATGGATTGAATCAATTTGGGTGGTTTGTTGTGTAATTACTAGCGATTGCGATGCATGTGTGGCGAAATTAGTGGGCTCAATCCATAGCTTAGTAGTAGAATCCAAGACTTGGAATTTCATGCAAAGATCCCTATTAGGCTTGTTAATCAATCTCTACATGTTGATGTTACGTTCTTTGGAACCGCACTTGTGGCGTACTATTTCCAGTCAATTTATTTTGCCTGCTGCCTGTTGCGAGTACAACCAGAAATTGCTGATTTTAGTGGACATGTCATAGATGGAACTATATGTGTCTTGCATGTTTCTAATGTTACTCATGCACGATAAGTGGTTTTGTTAAGTGAAAGATGCAGTTGGGGTAATATTAGTTCAAGTTGTTAATAAGTTGACAATGCAGTGATGCACGCTCTTTTCGTTTGGTACGATGTCCGGTTAATATGGTATATCTTGAAGATTAATTTGCATGTTCTAATTAACCAAAGGGCTTAAAATTTGACATGTTTCAGTTGTCCAACTAAACTGGAGATAGATACACGCGTCATTGAGTTTTCTTTTACTGATTAGGCGATTACTTTCTGAAAACCATATGTTTTGACCAACTTGCTGTCATAGTTTTTTTTTTTTTAACCTCATGGAGTGATAGAATTAGCAATAATGAACTTTAGTTCCTATATATGTTTAAGGTTCCATATACTTGCATGCATGTGCAATTTACTGACACTAGTGCTGTTAAGTTCAGTTAACATCAGCAGCTAATTAGTCTGGGCAGTGTCACAGAAAAAAAAATCTTAAAGCAATACTAGATCACAGACTCACAGCTAGTAATTCGGTTCACACATATGGATCACTTTGTCAGGAAATCATGCATGCACAGAAAAATTGCTCCCCTGTGTTTATTTTGCTTCTAGGTACAGTACAGAGTGGTACGTGATGTTAATTGGTGTCTCTCTTCCACAAGGCTAGAGGTTTAATTCCATCTCACGCACGCTGCACGCGCACCCTCTATCCCAAGCTTTCCCGTTTCAGTATCTCTGATCGCTCACTGCACCTGCATTACACGAGCCAAAACGCCTGACCTGTGCTTTGCATGTGTTGTGTTGGCCCATTTCCAAGAGGCCACAGGTGAGCAGATACTACTCCAAGAAGAGGGGTAGCAGCCACAGCAGAAATGGCAAGGATGATGCCAACCATGACGAGTCCAAGAACCAATCACCCGGCTTGCCCCTGAGCAGACAGAGCCTGTCCTCATCTGCCACCCACACCTACCACACCGGTGAGCAGAGCAATGCCTCCAGGCTTTGAACTCTATCGTCTAGTTTATATTTGTGCAAGAGCAGTTCCCCCAACTCTGTTTGTGCCAAGTTCTTGAAAACCTGTGCTGTTTTTGGTTTGATCAGGAGGGTTCTACGAGATCGACCACGAGAAGCTTCCCCCCAAATCCCCAATTCATCTCAAGTCCATACGCGTGGTAAAGGTGAGCCTTTTTTTTTCTTACTCGTACACTCGACTGCTAGCTTTGATCTGGATTGATTTGATGAATTGTTCTCGAAATGTTTGATCTGGATTGCTTCTCGCTCGTGGTGTTGTGGTCTTTGGTGGGTGCAGGTGAGCGGCTACACAAGCCTGGACGTCACAGTGAGCTTCCCGTCCCTCCTGGCGCTGCGAAGCTTCTTCTCCTCCTCCCCACGGTCGTGCACTGGGCCGGAGCTCGACGAGCGCTTCGTCATGAGCAGCAACCACGCGGCCCGCATCCTGCGCCGTCGGGTGGCCGAGGAGGAGCTCGCGGGCGACGTGATGCACCAGGACAGCTTCTGGCTCGTCAAGCCCTGCCTCTATGACTTCTCCGCGTCGTCACCACATGATGTGCTGACCCCGTCGCCGCCGCCTGCCACAGCGCAGGCGAAGGCGCCGGCAGCCAGTTCCTGCCTTCTCGACACCTTGAAGTGCGACGGCGCCGGGTGGGGCGTGAGGCGCCGTGTCAGGTACATTGGTCGCCACCACGATGCTTCCAAGGAGGCCAGCGCTGCCAGCCTCGATGGCTACAACACAGAGGTCAGCGTCCAGGAGGAGCAGCAGCAGCGACTGCGGCTTCGACTGCGGTTGCGACAACGCCGGGAGCAGGAAGACAACAAGAGCACTAGCAATGGCAAGAGGAAGCGGGAGGAGGCAGAGAGCAGCATGGACAAGAGCAGAGCCGCCAGGAAGAAGAAAGCCAAGACTTACAAGAGTCCCAAGAAGGTGGAGAAGAGGCGCGTCGTGGAGGCTAAAGACGGCGACCCTCGGCGCGGCAAGGACCGGTGGTCGGCCGAGCGGTACGCAGCGGCGGAGAGGAGCCTGCTGGATATAATGCGCTCCCATGGTGCCTGCTTCGGTGCGCCGGTGATGCGGCAGGCTCTGCGGGAGGAAGCCCGCAAGCATATCGGTGACACCGGCCTCCTTGACCACCTGCTCAAGCACATGGCCGGCAGGGTACCGGAAGGCAGCGCGGACCGGTTCCGTCGCCGGCACAATGCGGATGGTGCCATGGAGTACTGGCTGGAGCCGGCGGAGCTTGCCGAGGTACGGCGGCTGGCTGGAGTGTCTGATCCATACTGGGTGCCGCCACCTGGGTGGAAGCCAGGTGATGACGTGTCCGCAGTCGCCGGTGACCTCCTGGTCAAGAAGAAGGTGGAAGAGCTCGCTGAGGAGGTTGATGGTGTAAAAAGGTCTCCTTTCTCTCGCTTTTTTGCAGCTTCTACTTCTTGTTTGGAGAAATACCAACATTTTTGTCAGTTCTACGAGTTCTGTGCTAAATTTCACTTGGGCTGGTGGTGTGAAGGCACATCGAGCAGCTCAGTTCTAATTTGGTGCAGCTGGAGAAGGAAACAAAATCTGAGGCAGAGCGATCTTACAGCTCTAGGAAGGTATATAGCCCATCAATCCTGTCGATTATTTCCCTTGCATCCATTTTCCTTCTGTTTATTGTTGTTACTTCTCAAGAAAGCGGGAATGTTTTTTTGTTTGCCCATTGTGACTTAAAATGTAACAAGCTAATATAACACTTGAGTTGCATTGACCTGCTTGCCTGTATTTTGAGTTGCATTGACCTGCCTGCCTATATTTTGAAATCTAGTCCTTTTATTTGTTTTTTCAGAATTTCCATGTAGGTATTATCAGTAGTTATGGCAATTGGCAATCTGGTCTTTTTCAATCTCTGAAAGTGTAAATTGTGAAGGACATATATGCAGCCAGCTAAAATTTCTCAGCTTTACTTACATTGACAAAAGCATACACTTTTGGCATGCCTCTCTTCTGTTCTGCTCTGCTTTCCATTATTGGAGCACTCATTTCTTTAGCATTTGTTTTTCAGGAGAAGTATCAGAAGTTGATGAAGGCAAATGAAAAGCTCGAGAAACAGGTGTTATCTATGAAGGTAACTAAACAACACCTCTCATCCTACTCCTGCGCTTTCATCTCAAACTATGCAAAAGCACTGGTACCTTGTTTAGCAACAAATGATCCACGTCTCTGATCATGTTCGATTATATGCCTGCACTTACATTAAGGTAAAACACATATCATTTCCTTGTTTAAATTACAGGACATGTATGAGCATCTGGTTCAGAAAAAGGGTAAGCTGAAGAAGGAGGTGCTGTCCTTGAAGGTATACCCCTGCAGATACACCTGAAATTTCCACCATGATCTGCACTTCACCACACATTATGATTTTCAAGCAAACTAAGCAGTTATACTCCTTGGGACTATTTTACTTTGGTCCACCATGTTTCTGATTATTCTGTTGTACCTAGCTATTTGCATGTTTAATTATACAACTCTTGATCATCAACTGGTACCTTTTCAGGATAAATACAAGCTTGTGCTGGAGAAGAATGATAAACTGGAGGAACAGATGGCTAGTCTCTCCAGCTCCTTCCTTTCTTTGAAGGTTGGTTGCCCTTTGTGGGTTCTGCTTCTAATTGTACCTGAAACACATGCCTTATTCCAAATCACCTGACACCTCTGCATGCACAGGAACAATTGCTGCTGCCAAGAAATGGAGATAATCTGAACATGGAAAGGGAAAGGGTGGAAGTGACTTTGGGCAAGCAAGAAGGCCTTGTTCCCGGCGAACCACTGTATGTTGATGGTGGTGACCGGATCAGCCAGCAAGCAGATGCCACCGTCGTCCAAGTCGGCGAGAAGAGGACGGCGAGGAAGAGCAGCTTCCGCATCTGCAAGCCACAGGGAACGTTCATGTGGCCACACATGGCGTCTGGCACGAGCATGGCCATCAGTGGGGGAGGCAGCAGCAGCTGCCCTGTCGCCTCCGGGCCAGAGCAGCTCCCTCGCAGCAGCAGCTGCCCCAGCATTGGGCCTGGTGGCCTCCCGCCGTCGTCACGAGCCCCAGCCGAGGTGGTGGTCGCGTCGCCACTGGACGAGCACGTGGCGTTCCGCGGGGGCTTCAACACGCCGCCCTCGGCATCGTCCACCAACGCCGCCGCTGCCGCCAAGCTGCCTCCCCTGCCCAGCCCGACGTCACCTCTCCAGACACGGGCCCTGTTCGCCGCTGGCTTCACTGTCCCGGCATTACACAACTTCTCCGGCCTCACCTTACGCCATGTGGTAAGTTCAAACATCTGCATCCGCACTTTGATTTCAACTCCCAACTCCTCCCAAGAACTGGAATTCCTTGAGCCTGTCAGATGCAAGATGGACGGCTTGGATGACCAACCAGTCACCCACAGAGAACACTTCTCTTCCCTTCTCTTTCTTCAACATGTGACACCTGACACTGATAATCTCGTATTCATGGCTGGCTGTTCGTCTGTCTGTGCAGGACTCCTCGTCGCCGTCGTCCGCGCCATGCGGTGCTAGGGAGAAGATGGTGACCCTGTTCGATGGAGACTGCCGGGGGATCAGCGTCGTGGGCACCGAGCTGGCACTGGCCACTCCGTCCTACTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013225