Os12g0484700

From RiceWiki
Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0484700| Description = Similar to Yippee-like protein CG15309| Version = NM_001073310.1 GI:115488581 GeneID:4352226| Length = 1804 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0484700

Description

Similar to Yippee-like protein CG15309

Version

NM_001073310.1 GI:115488581 GeneID:4352226

Length

1804 bp

Definition

Oryza sativa Japonica Group Os12g0484700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18051942..18053745

Sequence Coding Region

18052307..18052534,18053289..18053390

Expression

GEO Profiles:Os12g0484700

Genome Context

<gbrowseImage1> name=NC_008405:18051942..18053745 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:18051942..18053745 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgttcatggcggagctggtgggtccgcgggtgtacagctgctgcaactgccggaaccacgtctgcctccacgacgacatcatctccaaggcttttcaggggaggaatggccgtgcctttctgttctctcatgccatgaatgttgttgtgggcgcgaaggaggacaggcaacttatgacggggcttcacactgttgctgatatctattgcaatgattgccgggaggtgttgggctggaagtacgagagagcctatgaggaaacacagaagtacaaggaagggaagttcatatttgagaagtcaaaaatcgtcaaagagaactggtag</cdnaseq>

Protein Sequence

<aaseq>MVFMAELVGPRVYSCCNCRNHVCLHDDIISKAFQGRNGRAFLFS HAMNVVVGAKEDRQLMTGLHTVADIYCNDCREVLGWKYERAYEETQKYKEGKFIFEKS KIVKENW</aaseq>

Gene Sequence

<dnaseqindica>1212..1439#356..457#tttcttctcccaaactccggcgactcctccgctaatcccctccggcgccgcctcctctccgctccccgcgccccccacctccggtcacgcccgatcggttagtacttactcggaaccctccctttcacctccgtgttcaattcagtccaaacctcccgatttctgcttctcccctcttcccgcaattcgggggttccaagggttcttggaacccaaagttcttggtgaaatttggggtccctagttcgattcctctttttttattattactagccacgagatggtgtatgtaattcgcgtctcgattctttgcaggattggttgagttgcctcgagggatttttgctctcgaggtatggtgttcatggcggagctggtgggtccgcgggtgtacagctgctgcaactgccggaaccacgtctgcctccacgacgacatcatctccaaggcttttcaggtcggccctcggcagccggggagcttttccttctccttgaattctttttttttttttttgttcctaggagctaattacctgcctgcctaatttagggctcctgcttgatcgaagaaatgatcagtagttgttcagatgagatacatgcttgttactactccgcactacgtatgttttagtgggatatggttggatatgcagtgatcaagtagtccatatcattgcggtaacggtaattggactaacaaaaaacctggatgtggcattggtttctgattgcctgtgcggtttatgagtcattatgtgattagctgtcgatggttgcaaactcttttttttttttctagtcatgcatactgtataagaataactgtagatgatataccctttgtgtaaattggcatgatttcagtaaagatttgaggtagtatttagcacgccttttgcttaccttactaccggggttgtgtgtatgttatgctaaagaaccagcacctcaattcggtgtgctgcattttattcctcagtttaattcatgcttacaatgaaacaacttgacactaaagcctaaaagttaacaaaaaaatgcagtcttatatttgttaaaatttatacctttgctttcctaaaagaacaactcaaaataactgaacacaagcacagtagctttctgaagaaatactgcatcattgggcctttagacaaatgcttgaaggctgatgccttctacttaccgttattttggttattttaggggaggaatggccgtgcctttctgttctctcatgccatgaatgttgttgtgggcgcgaaggaggacaggcaacttatgacggggcttcacactgttgctgatatctattgcaatgattgccgggaggtgttgggctggaagtacgagagagcctatgaggaaacacagaagtacaaggaagggaagttcatatttgagaagtcaaaaatcgtcaaagagaactggtagaatccaaaagattaggcactccaaactttctttagaggatgaaacattcactgttccaaggttatcagtgtgttctggttctttatgtctttgtaaatatcagtcatccacaagttttaatcttaagtctgcctgttcttgccttgccgtgaagtgtaaattgttcttgctcccgtttctttctgtgaataacatatggcctgtgggtatttgttcttgaaccatgtgtgctaatgtgcgtaattttataggtactaaaagaatgtttgtatctttctcctgcacaagaataccgcgtggagatttacagtcaaatataatctgacatgatttaatcaaaatttgttgggaagttgtgaagtaag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0484700, RefSeq:Os12g0484700