BGIOSGA013227

From RiceWiki
Revision as of 09:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013227| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013227, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013227

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013227, complete gene.

LocusTag

OSJNBA0093M23.2

Ensembl Transcript ID

BGIOSGA013227-TA

Ensembl Protein ID

BGIOSGA013227-PA

Length

3227

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29120982..29124208

Sequence Coding Region

29120982..29122340,29123984..29124033,29124115..29124208

Genome Context

<gbrowseImage1> name=IndicaChromosome03:29120982..29124208 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:29120982..29124208 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGAGGACCACGACTGCGACCCCGACCAGCCGCCGGCCGGAGCGGCGGCGGGGGCGAGCCCGTGCTCGTGCTGCTCGACGCCGTGCGCGGTCGCGACGTGGCGGCGGTCGGTGAAGAGGAAGCTGGGGGAGAAGGGGGATGGGGAGGTGGAGGGGGAAGGGGCGGTGGTGCTGGCGCGGGTGGAGGCGGAGGAGGAGGCGGCGGCGCTGCGGGAGGCGGTGGCGGCGGCGCAGGAGACGGCCGCGGCGCTGCGGTCGGAGGTGGAGGAGGAGCGGCTCGCGGCGGCCAGCGCCGCGAGCGAGGCCATGGCCATGATGCTGCGCCTGCAGCGGGAGAAGGCCGAGGTCCAGATGGAGCTCCGCCAGTTCCGCCGCTTCGCCGACGAGAAGATGGCGCTCGACGCCGCCGAGATCGACCACCTCCGCGCCGCCCTCGCCCGCCGCGCCCGCCACCTGGCGCGCCTCCGCTCCACGCTCCGGGAGTACCGCCACACGTGCCTCCGCCTCGGCATCCCACTCGCCGAGGGCGACCAAGCCGATGAGTTGGCCCTAGACGACGGGTTCGTTCTCGAGGGCGAGGATGGCGACGGCGCCGGATACTACCCAGAGCTACGCTGCTACGACGGGGAGTACTACTACGAGGATGGCCAAAAGGAGGGCGAGGAGGAGGACGATCCCGTTGTCGTCGATCTGGAGCGCCGGATCTACCTCCTCGAGCACGACCACAAAAACCATGGAGTTGAGCTGTGCTTGGAGGAAGAGGAAGGCGCTCCACTTTACGCAGACGAGCCGCTGCCGGATTCATCTGAGCAGGAATTGAACAGCGTATATGTCGACGAGGCATTGCCTGAAGGGACTGTGCAGGAAAGAAACCAATGCAGTGATGATGATGATGAGTTGCCGGAGTCTCCAGCTGCTAGAAATGGCAGTGAGGAAGAGGGAAGCGATAGTGATGGTGGTCGCAGCGGCAGTGGCAGCGATAGGGTATACACAATCGACAAGGTGCATCAAGGTGCTACTGCTCCAGCAGCTAGGGTCTTAGAGAATTACCAGGATGGGGAAGTGGAGCCAGACATTAAGAAGCTATACATGAGACTGGAGGCGCTGGAGGCAGACCGGGAGTCAATGCGGCAAGCCCTGGTGGCAATGCACTCGGAGAAGGCTCAGCTTGTGCTCCTCCGGGAGATTGCACAGCAGCTAGCCAAGGATGCTACTCCAGCTAACACAGGAGGATTTGGGGTGGTGCCAACTGTGCACCATTTTCCTGGAAAGCAAGATGGGTTCAGAGATCAGAGGTTTCGGGAAAACAGGAAGATGGCGATTGCCAAGAGACTCTCCATGGTTGCGTTGTGTAAGTGGATTGTTGCTTTATTTCGCTCTCAGAAAAGGAACCCATCACAAAGCAGGTACACATTTGGTCTATCTGGCAACAATGTCGGCTTGCTAGTACTCCTGGACAAGTACCCGCGGATTCAGAAAACTCTCACAAGAAGAAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MDEDHDCDPDQPPAGAAAGASPCSCCSTPCAVATWRRSVKRKLGEKGDGEVEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVEEERLAAASAASEAMAMMLRLQREKAEVQMELRQFRRFADEKMALDAAEIDHLRAALARRARHLARLRSTLREYRHTCLRLGIPLAEGDQADELALDDGFVLEGEDGDGAGYYPELRCYDGEYYYEDGQKEGEEEDDPVVVDLERRIYLLEHDHKNHGVELCLEEEEGAPLYADEPLPDSSEQELNSVYVDEALPEGTVQERNQCSDDDDELPESPAARNGSEEEGSDSDGGRSGSGSDRVYTIDKVHQGATAPAARVLENYQDGEVEPDIKKLYMRLEALEADRESMRQALVAMHSEKAQLVLLREIAQQLAKDATPANTGGFGVVPTVHHFPGKQDGFRDQRFRENRKMAIAKRLSMVALCKWIVALFRSQKRNPSQSRYTFGLSGNNVGLLVLLDKYPRIQKTLTRRK</aaseq>

Gene Sequence

<dnaseqindica>1..1359#3003..3052#3134..3227#ATGGACGAGGACCACGACTGCGACCCCGACCAGCCGCCGGCCGGAGCGGCGGCGGGGGCGAGCCCGTGCTCGTGCTGCTCGACGCCGTGCGCGGTCGCGACGTGGCGGCGGTCGGTGAAGAGGAAGCTGGGGGAGAAGGGGGATGGGGAGGTGGAGGGGGAAGGGGCGGTGGTGCTGGCGCGGGTGGAGGCGGAGGAGGAGGCGGCGGCGCTGCGGGAGGCGGTGGCGGCGGCGCAGGAGACGGCCGCGGCGCTGCGGTCGGAGGTGGAGGAGGAGCGGCTCGCGGCGGCCAGCGCCGCGAGCGAGGCCATGGCCATGATGCTGCGCCTGCAGCGGGAGAAGGCCGAGGTCCAGATGGAGCTCCGCCAGTTCCGCCGCTTCGCCGACGAGAAGATGGCGCTCGACGCCGCCGAGATCGACCACCTCCGCGCCGCCCTCGCCCGCCGCGCCCGCCACCTGGCGCGCCTCCGCTCCACGCTCCGGGAGTACCGCCACACGTGCCTCCGCCTCGGCATCCCACTCGCCGAGGGCGACCAAGCCGATGAGTTGGCCCTAGACGACGGGTTCGTTCTCGAGGGCGAGGATGGCGACGGCGCCGGATACTACCCAGAGCTACGCTGCTACGACGGGGAGTACTACTACGAGGATGGCCAAAAGGAGGGCGAGGAGGAGGACGATCCCGTTGTCGTCGATCTGGAGCGCCGGATCTACCTCCTCGAGCACGACCACAAAAACCATGGAGTTGAGCTGTGCTTGGAGGAAGAGGAAGGCGCTCCACTTTACGCAGACGAGCCGCTGCCGGATTCATCTGAGCAGGAATTGAACAGCGTATATGTCGACGAGGCATTGCCTGAAGGGACTGTGCAGGAAAGAAACCAATGCAGTGATGATGATGATGAGTTGCCGGAGTCTCCAGCTGCTAGAAATGGCAGTGAGGAAGAGGGAAGCGATAGTGATGGTGGTCGCAGCGGCAGTGGCAGCGATAGGGTATACACAATCGACAAGGTGCATCAAGGTGCTACTGCTCCAGCAGCTAGGGTCTTAGAGAATTACCAGGATGGGGAAGTGGAGCCAGACATTAAGAAGCTATACATGAGACTGGAGGCGCTGGAGGCAGACCGGGAGTCAATGCGGCAAGCCCTGGTGGCAATGCACTCGGAGAAGGCTCAGCTTGTGCTCCTCCGGGAGATTGCACAGCAGCTAGCCAAGGATGCTACTCCAGCTAACACAGGAGGATTTGGGGTGGTGCCAACTGTGCACCATTTTCCTGGAAAGCAAGATGGGTTCAGAGATCAGAGGTTTCGGGAAAACAGGAAGATGGCGATTGCCAAGAGACTCTCCATGGTTGCGTTGTGTAAGGTATGAAGCTCTTTGTGCTGTTTGGACATCAGTGTGGATATGAATTTCATGCCTCTATTATCACCTTAGCAAAACATTGCAGCATTATACAATCATCAACTCGGTTTACTAGACTTAGCTTTCATCTGATAGGCTAGAAATCTTTTGAAATTGAAGCAATAATCGTTTCTTTAGCGATATTTAGTGTATAGCATTCGTGCAGTTTCATTCGTTAGATCAAGAGATGCAATTATGGAATTTCTATCTACATTTACTTTGCAGATGTTCAGGCATGTTTGATTGAAATGATTGTCATGAAATATTGCTGCATAATTTATTTCTATTCTATGTTATGCCAAAACCTAGTTCTAGCTGATATAATTGAATGAGCCCAAAGATAGTAAATTAGCATAGTCATGGTTCACGCCCAGGCCAGTCACATGCCAAACCACCACACTGAACCCAGTGTTCGAAAAAAAGGTCTGCAAGGCCGCATACAAGGAACGGGTGCCCCAACGTTGTACCACTTAAGCCACATAAACGGACGATTATGCAGCATAACCACTACAAGGTGGGGTGACCACACGAAACCACATACTGTTTTCTAAAACATTGACTGAACCCATATTGCTGCTTATGTATGGGTTGGGTCAGGTTACCAACTTGTCATACAAACCTATGTGTTTCGTGGTGCTCAAGTCTCACAAAACTTGGCGATGGAGATCAATGCCAATGGAATCTTTTAGCACTTTGTAACCTAGTTTTGATTGTTTCCTGTGTCCGGTCTCCATGAATCACTTCTGAGATGAGAACTTGCACAGTGGAAACTGAGTCATTGATAAAAGCTTACTGGACAACACCATTGATTTTGGCAAAATAAATTACAGCCATTGGATAATAGATATTGTAACTCAATATAAGTATGCAACCAGCCACAGGATTCAGTCTCCACACTCCTAGAGCCAGGCCAGTTTGGTAATGGAGAGGACTGCTTACATTGAGATAACGAGAAAATGGTTTGGTTGCTGATGTGACGTATCATAATGTCTAGTTAGAAAATAAAATCCATGCATAATATTTCCCGCCAAACAGCATGGCAGAAAAAAAAGCGACCTGCTCATGCCACGTGTCAGAACCTCTTATCTTCAATGTGGGTAGGATTCTCTTTTGGTATAGAACCCTGCCCAACTTGGCCCTGTTCAGCCTAGCATATTTAGGTTTTTGGTAATTTATTTAATTTGCTTATTTGCTCACTTTTGAGTATTTGGGTGCAACTGTTTTCCTACTTTTAAATTATTAGGAAGCCAAAATAGAAAGTATAGGAGCTTTGAAGCATTGATGTTTTGCCCATGGAACTAGCATTTTTCTCATTTTGGTGTCCCTATATCCTGCTCTGCATTTGTAGTGCAGCTGATGGCAGTAGCATCCATTTGCGACTGGATACTTCTTACTATAGTTGTTTTCTGTTTAGTTTTACGTTGCTATACTGTACCTCTATATGAATGTGTTTTGATAAGCTCTTTGTGTTGCCTAACCATTCATAAATATAATGAGTACTTATTTTATTGTTACTATTCTTCGGAACTCCATTTCTATGGTCCTCGAGGGCTATAAAGTATATATCCTCTTCCTGCTTGCTTAACTATTTCTGATCATGTTTGCAGTGGATTGTTGCTTTATTTCGCTCTCAGAAAAGGAACCCATCACAAAGCAGGTACATAAAAGCTTCTTTGGGAATTTGGTGCATTATACAAAGTATATGGTGATATTGACTACTCTTCTACTTGATTGATAGGTACACATTTGGTCTATCTGGCAACAATGTCGGCTTGCTAGTACTCCTGGACAAGTACCCGCGGATTCAGAAAACTCTCACAAGAAGAAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013227