BGIOSGA013239

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Revision as of 09:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013239| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013239, complete gene.| tag = OsI_128...")
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Gene Name

BGIOSGA013239

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013239, complete gene.

LocusTag

OsI_12854

Ensembl Transcript ID

BGIOSGA013239-TA

Ensembl Protein ID

BGIOSGA013239-PA

Length

3871

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29471768..29475638

Sequence Coding Region

29471768..29471945,29472004..29472133,29472259..29472370,29473341..29473416,29473515..29473603
,29473890..29473976,29474291..29474407,29474489..29474596,29474695..29474748
,29474853..29475005,29475558..29475638

Genome Context

<gbrowseImage1> name=IndicaChromosome03:29471768..29475638 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:29471768..29475638 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGTCCGCTGCTCCGCGGCGAAGAGGAGCTACAACGTCACGCTCCTCCCCGGTGACGGCATCGGCCCGGAGGTGGTCGCCGTCGCCAAGGACGTCCTCTCCCTCGCCGGCGCTCTCGAAGGCAAGGCTTCGAATCAATCTCTCTCACTCTCGCTCTCTCTCGGCCCTACGCGCGTCGAGTTCCGCTTCCAGGAGAAGCTGATGGGCGGCGCGGCGGTGGATGCGTACGGCGTGCCGCTCCCGGAGGAGACGCTCGCGGCGGCGCAGGCGTCGGACGCCGTCCTCCTCGGCGCCATAGGAGGGTATAAGTGGGATAACAATGAGAAGCACCTCAAGCCAGAGACTGGGTTGCTCCAGATACGCGCTGGGCTTGGCGTCTTTGCTAATCTGAGGCCAGCTGCAGTGTTGCCTCAGTTAGTAGATGCATCTACTTTGAAAAAAGAAGTAGCTGAAGGAGTCGACATCATGGTTGTTAGAGAGCTTACAGGAGGAATATACTTCGGCCAACCTAGGGGTTTTGGAAAGAACGACAAAGGAGAAGACACTGGCTTCAACACTGAAGTATATTCAGCTTCTGAGATTGATCGAATCACACGTGTTGCATTTGAGGTTGCTCGCAAGAGGCGCGGGAAGCTTTGCTCAGTAGACAAAGCGAATGTGCTTGAGGCATCTATGCTTTGGAGAAAACGGGTGACTTCATTAGCTTCTGAATTCCCTGACATTGAGCTGTCGCACATGTATGTTGATAATGCAGCAATGCAGCTTATTAGGAATCCTAAGCAGTTTGACACAATTGTCACAAACAATATTTTTGGTGACATATTGTCTGATGAAGCATCAATGCTTACTGGAAGCATTGGAATGCTCCCATCTGCCAGTGTTGGTGAATCGGGACCAGGTCTTTTTGAGCCTATTCATGGTTCTGCGCCCGACATTGCTGGGCAGGATAAGGCAAACCCATTAGCTACAATTCTTAGTGCTGCCATGCTATTGCGGTATGGCCTTGGAGAAGAAAATGCTGCAAAGAGAGTTGAAGCCGCAGTTACAGAGACACTAAACAACGGGTTCCGAACTGGGGACATATATTCTCCTGGAACGACCTTGGTCGGATGCAAGCGAATGGGAGAGGAAGTCCTGAAGACTGTAGAGTCGCAGAGCGCGGTTGCTCTAAACTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAVRCSAAKRSYNVTLLPGDGIGPEVVAVAKDVLSLAGALEGKASNQSLSLSLSLGPTRVEFRFQEKLMGGAAVDAYGVPLPEETLAAAQASDAVLLGAIGGYKWDNNEKHLKPETGLLQIRAGLGVFANLRPAAVLPQLVDASTLKKEVAEGVDIMVVRELTGGIYFGQPRGFGKNDKGEDTGFNTEVYSASEIDRITRVAFEVARKRRGKLCSVDKANVLEASMLWRKRVTSLASEFPDIELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMLTGSIGMLPSASVGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLRYGLGEENAAKRVEAAVTETLNNGFRTGDIYSPGTTLVGCKRMGEEVLKTVESQSAVALNS</aaseq>

Gene Sequence

<dnaseqindica>1..178#237..366#492..603#1574..1649#1748..1836#2123..2209#2524..2640#2722..2829#2928..2981#3086..3238#3791..3871#ATGGCGGCCGTCCGCTGCTCCGCGGCGAAGAGGAGCTACAACGTCACGCTCCTCCCCGGTGACGGCATCGGCCCGGAGGTGGTCGCCGTCGCCAAGGACGTCCTCTCCCTCGCCGGCGCTCTCGAAGGCAAGGCTTCGAATCAATCTCTCTCACTCTCGCTCTCTCTCGGCCCTACGCGTTAGCCCCCGATTGCTAGCAGCAGTATGACCCCCCTTGTTGTTTCCTTCCGCCACAGGCGTCGAGTTCCGCTTCCAGGAGAAGCTGATGGGCGGCGCGGCGGTGGATGCGTACGGCGTGCCGCTCCCGGAGGAGACGCTCGCGGCGGCGCAGGCGTCGGACGCCGTCCTCCTCGGCGCCATAGGAGGGTGAGCGGTTTGTTCGACTAGAAATGTAGATGCCGCAGCAGTACCCGCAGAGAGTTTGTTTTCGGCTGGGTCAGAATTCGCGTTCTGACTTCCGGGATAGTTTGATACAATGCTGTGCTTTGTAGGTATAAGTGGGATAACAATGAGAAGCACCTCAAGCCAGAGACTGGGTTGCTCCAGATACGCGCTGGGCTTGGCGTCTTTGCTAATCTGAGGCCAGCTGCAGTGTTGCCTCAGGTATATCCTACTCCCACCTTAGTTCAGTTCAGTGCAATTCGCTTGATCAGTATTATTCGTTTAAATAGCGACATCTTTTTAGTTGCTTTGAGCTTTATGGAGTTGAAATGATGGTAGAACATCTCCTGAAGTAATCTGTGCCAATGCCAATTTTGAACAATTACCACGATCTGGGGTATCTGAATTGACTGCTGAACTGTCTCGGACATTCAAGGTTGTAACTACATTAGTGCATGCGATGCTGCTATTAATAGATAGGGAAAACTATGTCAGTAACCTTCAAACATCCGTATTTAATTTAAACAAATAACAATGCAAATGAAGCTTGTCTTCACAATGGCACTGTGAAGGCATATTATGGCATATTACACCATGATGAATGGTAAAATGACAGTGATTTCTTTCCCTGTAGTGGCTAGTAATGGACACTTACCAGAAATGGGTGTGGAAGGAATGTTTCATATTCAAAAGAATATGACGGGATATTCCAAAAGATTTTTGTTTGTTTTTTTCCTTCTGTAATGTCGTTTTGAAGTTAGCTCCAGTTGCAATGTCATTCCTTCCTCTAAATATGCATGCTTATATAGAGCTGGCTTAATTTTCTCTAGTTCTCCTTTTTCACTAAATATGCATTGCCTGCCCATTCCATTATATTATGTTGTCATCAACCACAAAAGAAATCTATTATGAATTATATTTTTAAATTATAATCCATGATGGATGTACAGATGTAGTATACCAACTTCATGTAGGCAATCTTGATTTCGTTTGGAAAATTACTAATGGTGAATATAATACTGTTTGACTGCATATATTCTAGGACATATATATTTAGTGATAGGGAAAGTAGTTAATATCAATCTTCATTTTTTTTAATGTTTATGTACTAGCTATGCTGCCCCTATATTCCTATAGTATTCAAGAGGACTACCTGTAGTTATTTTTTCCTTTGAGCTAATTATCTCTTTAGTTAGTAGATGCATCTACTTTGAAAAAAGAAGTAGCTGAAGGAGTCGACATCATGGTTGTTAGAGAGCTTACAGGAGGTAATATTAATTAAGGAGCATGGAGGTTTCTCATTAATTTTTCATATTGATACTTCATATACATTCTTATGGAACTTGTTACAACATTTGCCTGGCAGGAATATACTTCGGCCAACCTAGGGGTTTTGGAAAGAACGACAAAGGAGAAGACACTGGCTTCAACACTGAAGTATATTCAGCTTCTGAGGTGATTCTATCCTTCATTACATATTTTAGCATCTTGCTCCACTGAAAAGTTATTTCTTGGACAAGTCATAGTCCCACATGGGTGGTGGTGCCAGGAATGTGCATGGCTAAACTTCAAATACAGCTTCGACATTTATTTTCTCACAAATATCTGTCTAGACATGATATCTGGTCACGTGTCTGTATTTAATTGCAAACTAAGAAATGTTCATTTAATATTATTTTTTTTAAGAATGCATTCACCTCCAACAATTTTATGTGTTCATGGAATTTTGCTTGATCCCCAGATTGATCGAATCACACGTGTTGCATTTGAGGTTGCTCGCAAGAGGCGCGGGAAGCTTTGCTCAGTAGACAAAGCGAATGTGCTTGAGGTACTTCAAGATACATTTATGTTGTGAAACTTCATGTTGGAGTATATGTTGTATGGAAGTGTTCCTTGATCCTTTCTGTTTGACTTGATTCTTAAACTGAGCATGGACGCTATAACAAACATGTATGTGGTTGTCATATGATTGCGAAATAAAAAGTACAAACATAGATTTGGTGTTTCTATCTTGGATACTTAATTGGATTCACATATCATTACTTATCATTTTTCTAACACTTGTAAATCCCTTGAAAGGTTAAAAAGGTTTGTTTTTGATCTGTTGTTTAACATGGCTCTTTCATTCTTATATTATTGTAGGCATCTATGCTTTGGAGAAAACGGGTGACTTCATTAGCTTCTGAATTCCCTGACATTGAGCTGTCGCACATGTATGTTGATAATGCAGCAATGCAGCTTATTAGGAATCCTAAGCAGGTTTGTTTCTTTTATATGCAACTTATTGCACCTTGCTGAGAAAGCGAGCATTAACCCACTGAATTCCCTGCAATGTTGCAGTTTGACACAATTGTCACAAACAATATTTTTGGTGACATATTGTCTGATGAAGCATCAATGCTTACTGGAAGCATTGGAATGCTCCCATCTGCCAGTGTTGGTGAATCGGTAATGCATGGCCAAAACTTCTCTGCATTTTTTAGACACTGATTTTTTGATGAAAATGATGGATGTATGACAGCTAAGTATTCTCCTTTTGTATGCAGGGACCAGGTCTTTTTGAGCCTATTCATGGTTCTGCGCCCGACATTGCTGGGCAGGTTGAGATGACCTCTAACTCTGAAATATTGTTAAAACTCTACATTGGCCTTTAATATGCAGCTTTATCTGAATGTTTGCTTCCTCTATTAATTATTGAGTGCAGGATAAGGCAAACCCATTAGCTACAATTCTTAGTGCTGCCATGCTATTGCGGTATGGCCTTGGAGAAGAAAATGCTGCAAAGAGAGTTGAAGCCGCAGTTACAGAGACACTAAACAACGGGTTCCGAACTGGGGACATATATTCTCCTGGAACGGTAAGACTGATTTGTTATGCATCCATGAATAGTACAATGCTTGTATTTGTCCTGTTGAAGATGTCCAGTGTCTAGTAGCTATTTGCTATGTTTCTGCCAAACTGAGGTTTAATAATGGTTACTAGCTTCGTATAATCTACTTGCATACCAAATAGTTGGTGGCTACCTAGGGATAATTATTTATTGTTTTATACAGTGAGCATAGAAAAAAAGTGTGATATATTGGGACTAGTTATCAACTTATCATGTACTCGGTCCCAAAATATAAGAACCTAGGACCGTATGGGACATTTCCTATTACAACGATTCGTTGTACTAGGAAATGTCCTATCCGGTCCTAGGTTCTTATATTTTGGGATGGAGTATTCAACTTGAAAAAAGGAAATTCAACTCTACCTTATTATGTAGCATAGATCAAACAATCAGTTTCTTTTAGCTTATGTTGCACCTCAAATTTGTTAACTTTCGCTACTTGTATAACTAGTGCTACAGAGGTACCAATTATATGTGCTCCCTTTTTCTCCCCTTTGAAAACTTATCTTTCTTAACCAGACCTTGGTCGGATGCAAGCGAATGGGAGAGGAAGTCCTGAAGACTGTAGAGTCGCAGAGCGCGGTTGCTCTAAACTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013239

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013239&oldid=58062"