BGIOSGA013289

From RiceWiki
Revision as of 09:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013289| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013289, complete gene.| tag = OsI_129...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013289

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013289, complete gene.

LocusTag

OsI_12947

Ensembl Transcript ID

BGIOSGA013289-TA

Ensembl Protein ID

BGIOSGA013289-PA

Length

4721

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30397923..30402643

Sequence Coding Region

30397923..30397978,30398333..30398419,30398828..30399029,30399545..30399713,30400511..30401736
,30402605..30402643

Genome Context

<gbrowseImage1> name=IndicaChromosome03:30397923..30402643 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:30397923..30402643 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCTGACCCGCAACAGGCCAAGATCCGTCAGGGCCCATCTATCAAAGCCAGAGTCGTCTCCGGTGATCCCCCGAGTTCAAGTGGCAGCGGCGGCGGCGGCGGCGGCCGTATAGACTTCGTCCACGAGCACTTCGCAAGATTTGAGGTCCTTATCTTGAAAGGCAAATTTAATCATGTGAAGTTCTTGCTGTTTGCAGGTGGGAGAGTTCTCTTCGTACTTGTAAACATGTTGGAGAAGATCGGATTGCCGCCAAAGCCATCTATGCGAGGGGCTAGCTGGGTGGTGGACGCAACCCACTGCCAGGGTTGCTCTGTTCAATTCTCCTTGTTCACTAGGAAGCATCATTGCCAAAGATGTGGAGGTTTGTTCTGCAGCAACTGTACCCAGCAGAGGATGGTTTTACGTGGACAGGGTGATTCACCTGTTCGAATTTGTGATCCTTGCAAAAAGCTTGAAGAAGCAGCACGTTACGAGCTGAGATATGGACACAAAAACAGAGCTTCAAAAGCTAATGCTAAAGCAGCTTCTAACCCAGAGGATGATGTTCTTAGTGAAATTCTTGGAGGGGATGGAATGCAGACCAAGTTTTCTCGCAGGGAGTCCCTGGATCCTGAGCTTCCTGGCGCCTCTAGTTCTAGTTCCAGTTCCAGAAGAACTTCTGGTGCTTTCAGTATGGATGGTAATGGAGGTGAGAGCCTCTCTATTGAAGCACAAAATTATGAACTCAACAATACTGGATCAATTTTTACCCCAGAGGAATTGCGCCAGCAAGCAGTAGAAGAGAAAAAAAAGTACAAAACTCTGAAGTCCGAAGGTAAACCTGAGGAAGCACTTCGGGCTTTCAAGCATGGTAAAGAGCTTGAGAGGCAAGCCGCCGCCCTGGAGTTAGAATTGAGAAAGAACAGGAGAATGGCTACAAAAGCTCCCAGTGTAAGTGCTGTGGTTAGTACCAAGAATCTGGAGGGTTCTGATGAGGCTGAATCGAAAAAGTCTTTGCCTGGGAAAAGGGTTAGGAAAGAAAAGAATGATCTTGCCTCTGAACTTAAAGATTTAGGCTGGTCAGATGCAGATCTTCATGATGAAACAAGAACAACTGCTATGAGTGTGGAAGGAGAGTTGTCACAGATTCTTAGAGAGGTAACACCAAAATCATCAGAGGGCAACAAAACCAGTAGTATAGACAAGTCTCAGGTTAATGCTCTGAAAAGACAGGCCCTGTTGCTGAAAAGAGAAGGTAAACTTGCTGAAGCAAAGGAAGAGCTGAAGAAGGCTAAAATTTTGGAAAGACAACTAGAAGAGCAGGAGATTCTGGGTGAAGCAGACGAGTCTGATGATGATTTGGCTGCACTTATTCGTAACATGGACGATGGCAATCAGGATGACATTCTTTTGGACAATCCAAGATTCCCTGATTTTAATTTTGAAAAACTACTGGGCACCTCTGATGATCTTCTCATCGATGGCAACTTTGATATTACAGATGATGACATGAATGACCCAGATATGACTGCTGCACTAAAATCATTTGGCTGGAGTGAAGAGGACGAGATACAAATGGAAGGTCATGGTCCTGTTTCTTCTCCGAATCAAGAGGCATTAAAGGAGCAAGTGCTTGCTCTTAAAAGAGAGGCTATTGCACAGAAGAAGGCTGGTAATGTTGCAGAGGCCATGTCATTGCTTAGGAAGGCAAAGCTCCTCGAGAAGGATTTGGAAACTGAACAATCAGACTCCAAAAGATATCAGGAGATATACGGGGTTTATCGGATGGAATAA</cdnaseq>

Protein Sequence

<aaseq>MEPDPQQAKIRQGPSIKARVVSGDPPSSSGSGGGGGGRIDFVHEHFARFEVLILKGKFNHVKFLLFAGGRVLFVLVNMLEKIGLPPKPSMRGASWVVDATHCQGCSVQFSLFTRKHHCQRCGGLFCSNCTQQRMVLRGQGDSPVRICDPCKKLEEAARYELRYGHKNRASKANAKAASNPEDDVLSEILGGDGMQTKFSRRESLDPELPGASSSSSSSRRTSGAFSMDGNGGESLSIEAQNYELNNTGSIFTPEELRQQAVEEKKKYKTLKSEGKPEEALRAFKHGKELERQAAALELELRKNRRMATKAPSVSAVVSTKNLEGSDEAESKKSLPGKRVRKEKNDLASELKDLGWSDADLHDETRTTAMSVEGELSQILREVTPKSSEGNKTSSIDKSQVNALKRQALLLKREGKLAEAKEELKKAKILERQLEEQEILGEADESDDDLAALIRNMDDGNQDDILLDNPRFPDFNFEKLLGTSDDLLIDGNFDITDDDMNDPDMTAALKSFGWSEEDEIQMEGHGPVSSPNQEALKEQVLALKREAIAQKKAGNVAEAMSLLRKAKLLEKDLETEQSDSKRYQEIYGVYRME</aaseq>

Gene Sequence

<dnaseqindica>1..56#411..497#906..1107#1623..1791#2589..3814#4683..4721#ATGGAGCCTGACCCGCAACAGGCCAAGATCCGTCAGGGCCCATCTATCAAAGCCAGGTGGCGGCCCAGCCTCCTCCAAGCACTTTGCGGTGTTGGGCTGGGCTGGACTGGGCGTGGATTGGGCTTCTAGCCCAACACCCGGGTGGGGTGGGCGTGGACCCCACGTGTCAGGCCACTACCTCTCTCCTCCGTCTTCCTTCCCCTCGCGTCTCCCTTCTCCTCCTCCCGCATCCCCCCTCTCGCCGCCGCGTTCTCGTCGTCACCGGTGGCCGCCGCCTCGCTGCTCCCCCGCCCCCCTCCCCCGCCCGCCCGCGGCGCTGGACCTGTTCTGACTACTAGAGAGGGCCATCGCGTCCTCCTCGACCCTCCACTGCCCCTAGTTTTGGCCGCTCGGTCCTCCGGTCCTCCCAGAGTCGTCTCCGGTGATCCCCCGAGTTCAAGTGGCAGCGGCGGCGGCGGCGGCGGCCGTATAGACTTCGTCCACGAGCACTTCGCAAGGTGATTGGATCGAACTCGCGCAGGTTTTTTGGTTTGCTTCTCTTTGAGAAATTGCTGCTCCACATCGTCGGCTACATCGTTGGGTTACTTGGGTACATCCGGGAACCCACGAAGTCGATCTGTGCCGCCACCGACCGGAGCAGCCTCGATCTGCGCCGTCCGCCGCCGCCGTGACTTGGCCAGGCTCGATCTGCGCTGCTGCCGCCACCGTTGGTTGTTGGGGATTGATCTGCTCCGAACAAGCTATTAGTACTGATAGCTTAACATAAGCTTATGATTTACTTTCGTGGTGATTTAAATCGAATAGTTGATGGGCTGGCCAGTGTCCTATGAGGATTTGAGGATGACCTTATGTCTTTCATGACTAGCCATGATATATGATTATCATATATATAATTTCATGACTAGATTTGAGGTCCTTATCTTGAAAGGCAAATTTAATCATGTGAAGTTCTTGCTGTTTGCAGGTGGGAGAGTTCTCTTCGTACTTGTAAACATGTTGGAGAAGATCGGATTGCCGCCAAAGCCATCTATGCGAGGGGCTAGCTGGGTGGTGGACGCAACCCACTGCCAGGGTTGCTCTGTTCAATTCTCCTTGTTCACTAGGAAGGTATTCGATTATCTTCTTTTTTTCGCCTTGCAATGAAGATTTGAAAGCGAAACACATCATACTCCTCTACCGTAACCTTGTAGATGAGGATATGGTTCTGCTCAAAATTTGCTGATGGTGCTGCACTTGTTCCAATGTCATATCATGACCTCAATTGCACTTCATGGATATATTATCCTTTTCTGGATCACTCTTTTTCCTTAATTCCCTTTACCTGAAAAAATACTAGGTACAATGGCACAAAACTATGTTAACTATAACCATATGTTGGTTGTTACTAGCTTTGATGTTTTCTGTCCTGCCACATAAATTTTGTTGTCCTAGTTGGATGAAGACCTTATATTCTGTAATCCTATTGGCCGTACTGGTTAACTTTTGTGGACCTGGACTTTGCCATCATATATCTGAATGTATTCTTATGTTATTCTTAATCTTCCATTGGTACACGCATCCAGTTTCTTGTACTCTTATGTTTGCAGCAGGATCTGCTTAATTTTTTTTCTTTTAATATTTAGCATCATTGCCAAAGATGTGGAGGTTTGTTCTGCAGCAACTGTACCCAGCAGAGGATGGTTTTACGTGGACAGGGTGATTCACCTGTTCGAATTTGTGATCCTTGCAAAAAGCTTGAAGAAGCAGCACGTTACGAGCTGAGATATGGACACAAAAACAGAGCTTCAAAAGGTGAATATCTTTTGCCTTTTTTTTGTAAGTTATATCTTCTGATGAAAGAAATTATGATTTGGTTGATGAATTGACACTTCTAATCTGCTTGCTATATAAATGAATGCGTTTTTAAACAAATAATCAATTTAAAGTATTTGATTTCTGGTTAAATAAAATGTGATTGTCAGCATGGAAATGGGACACAACTGCCTTTGAATTTGCATTGTTTCCATTTCAGAGCACAGTCGAGAGCTTGTGTGCAAACTTTACTTTAGCTGCAGGAATGAACTTTGCAACATCCCTTTTCCCCCTTTGTGAATTTTGGCCATGCTTTATGTCAAGATCAGAAAAGACAATAGACATTATGTATAATGGTGCTTCCTGCTTCTTACTGATAAAGAATTAAGCACTTTTACAAGATGTGTTCAATCAAATGGGATCTATCTTATCCTTAGCTACAACTTAAAATTTCAAGTGCTGGAGTTTCTAACTAGTTTTGGTCCTTGTTCTGAAAAGTGTTATTTACTGTAGATTATAGTTTATACATATTTGAATTTTTAACATATCCATGCAGCGATTTGTTTATTATTTCGAATATTTCAAATGTAAAATTTCACTGCCAAGATCCGTAGAAGCAAACATCTATAGCAGAAAAAAAAAACTCCCAGTTGTGCATATGTAATACTAATCTATGACTAATAATGCATAATTGAATGCCAAAGTACTTGCTGGTCTCACCAAGCTGTGAACACAATAGAATGGCTTATTCATTTGTTCATGGGAGTTTTTTATATTCTTTGTACATTGTTTTGCAGCTAATGCTAAAGCAGCTTCTAACCCAGAGGATGATGTTCTTAGTGAAATTCTTGGAGGGGATGGAATGCAGACCAAGTTTTCTCGCAGGGAGTCCCTGGATCCTGAGCTTCCTGGCGCCTCTAGTTCTAGTTCCAGTTCCAGAAGAACTTCTGGTGCTTTCAGTATGGATGGTAATGGAGGTGAGAGCCTCTCTATTGAAGCACAAAATTATGAACTCAACAATACTGGATCAATTTTTACCCCAGAGGAATTGCGCCAGCAAGCAGTAGAAGAGAAAAAAAAGTACAAAACTCTGAAGTCCGAAGGTAAACCTGAGGAAGCACTTCGGGCTTTCAAGCATGGTAAAGAGCTTGAGAGGCAAGCCGCCGCCCTGGAGTTAGAATTGAGAAAGAACAGGAGAATGGCTACAAAAGCTCCCAGTGTAAGTGCTGTGGTTAGTACCAAGAATCTGGAGGGTTCTGATGAGGCTGAATCGAAAAAGTCTTTGCCTGGGAAAAGGGTTAGGAAAGAAAAGAATGATCTTGCCTCTGAACTTAAAGATTTAGGCTGGTCAGATGCAGATCTTCATGATGAAACAAGAACAACTGCTATGAGTGTGGAAGGAGAGTTGTCACAGATTCTTAGAGAGGTAACACCAAAATCATCAGAGGGCAACAAAACCAGTAGTATAGACAAGTCTCAGGTTAATGCTCTGAAAAGACAGGCCCTGTTGCTGAAAAGAGAAGGTAAACTTGCTGAAGCAAAGGAAGAGCTGAAGAAGGCTAAAATTTTGGAAAGACAACTAGAAGAGCAGGAGATTCTGGGTGAAGCAGACGAGTCTGATGATGATTTGGCTGCACTTATTCGTAACATGGACGATGGCAATCAGGATGACATTCTTTTGGACAATCCAAGATTCCCTGATTTTAATTTTGAAAAACTACTGGGCACCTCTGATGATCTTCTCATCGATGGCAACTTTGATATTACAGATGATGACATGAATGACCCAGATATGACTGCTGCACTAAAATCATTTGGCTGGAGTGAAGAGGACGAGATACAAATGGAAGGTCATGGTCCTGTTTCTTCTCCGAATCAAGAGGCATTAAAGGAGCAAGTGCTTGCTCTTAAAAGAGAGGCTATTGCACAGAAGAAGGCTGGTAATGTTGCAGAGGCCATGTCATTGCTTAGGAAGGCAAAGCTCCTCGAGAAGGATTTGGAAACTGAACAATCAGACTCCAAAGTTCCTTCCCCACAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCTCTGGCGAGTAGTATTTTACTCGCTTCGGGTCGATAAGCTTTTTACAATGTTAAGCATTTTATTATGTAATAAAAAGTTCCTTCGCCATATGTGTCTCATTTCCATATTGATGTTAACTTAGGGGTTTACTGGTAATAAAAAAACGTTACCATCTTCGCCATATTCTATAGCACAATACATCAATATGGAAATGACACACATATGAACCTTCTTTTATATAAGAATTTTGCCGCAGATGGTTAGATATATAAACTCGTCCAAGTTGTCTCTCTTAGGCATTTAAATGGTGAACATTAGAAGTTTTTAGGTTACCTAAAACTGAAAAGTATAAGTAACCTCATTTGTCCTCCCTTTTATCTATGAAAGAAGAGAAGTTTACGTAGCTACAGAATGAGGAGAATAATAAGAGTGGTAAATGGAGGAAAAAGATGGTCGAAAGAAGCAGGGGCGGAGCTAGAATGAAATGTAGAGGGTGCCACTTGCTTAATTTACTCTGCTTCACATCGAGTTTAAGCTAACATGAGTGTCTAAGTTTGTATTGAGAAGGTACACACATGATGAAAATAGGTAAGATACAGCTAAAAAGTTTTCTTCACCGGGTTCCTGGGTGCCCCTGAGATACTCTACCTCCGCCCTGGAAAGAAGGTAAAAAGAAAATGTCGAAAATCACAAGATTTCAGTCACCTAAATACTGTACCCACTTGCTTTATTCTTCTTGATCCCTTGGCTCTATGTTTGCCTAGCTGCCTACTGCTCGTCTCACTCGCTGCCGGATGAATTCGTTTCTTGTGCAGAGATATCAGGAGATATACGGGGTTTATCGGATGGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013289