BGIOSGA013305

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Revision as of 10:00, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013305| Description = Cbs domain containing protein, expressed| Definition = Oryza sativa Indica Group BGIOSGA013305, complete gene.| tag =...")
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Gene Name

BGIOSGA013305

Description

Cbs domain containing protein, expressed

Definition

Oryza sativa Indica Group BGIOSGA013305, complete gene.

LocusTag

OS03G0674300

Ensembl Transcript ID

BGIOSGA013305-TA

Ensembl Protein ID

BGIOSGA013305-PA

Length

4973

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30628652..30633624

Sequence Coding Region

30628652..30628829,30629581..30629657,30629755..30629838,30629925..30630038,30630180..30630266
,30631014..30631153,30631246..30631333,30632189..30632262,30632795..30632928
,30633043..30633284,30633580..30633624

Genome Context

<gbrowseImage1> name=IndicaChromosome03:30628652..30633624 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:30628652..30633624 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGGAGTACCACTGCTGCGGGGCGGCCTTCTTCGAGCACGTGGTGATCATCGTGGTGCTGGTGCTCTTCGCGGGGCTCATGTCGGGGCTCACCCTGGGGCTCATGTCCCTCAGCCTCGTCGACCTCGAGGTCCTCGCCAAGTCCGGCACCGACCAGGACCGCAAGCACGCAGCTAAGATATTGCCTGTTGTGAAAAACCAGCACCTTCTGCTATGTACTCTTCTGATCTGCAATGCTGCAGCCATGGAGGCTCTGCCCATATTCCTTGATAGCTTGGTGACTGCTTGGGGTGCAATTTTGATCTCAGTGACATTGATCCTGCTGTTCGGTGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGCTCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCATATCCGATAAGCAAGCTGCTGGACCATCTGCTTGGTAAAGGTCATACAGCTCTATTCCGTAGAGCTGAACTAAAAACACTCGTGACCCTGCATGGAAATGAGGCTGGTAAAGGTGGGGAGTTAACCCACGATGAAACTACTATAATAGCTGGAGCTCTTGAGCTTACTGAAAAGAAAGCTAAAGATGCTATGACACCCCTATGTCAAACATTTGCTATTGATATAAATGCAAAGCTTGACAGGGATCTAATGCAAAAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTGAGAAGGTTGTGAAGAATCTTCCTCCACTAAGAAGATGGAAGAGCTGCCCCAACTCTCAGAATTCTAATAGAGGGAACAGGAATAGAAAATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGA</cdnaseq>

Protein Sequence

<aaseq>MAVEYHCCGAAFFEHVVIIVVLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTDQDRKHAAKILPVVKNQHLLLCTLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEILPQSICSRYGLAIGASVAPLVRVLVWVCFPVAYPISKLLDHLLGKGHTALFRRAELKTLVTLHGNEAGKGGELTHDETTIIAGALELTEKKAKDAMTPLCQTFAIDINAKLDRDLMQKVLDKGHSRVPVYYEKKTNIIGLILVKNLLSINPDDEIPIKSVTIRKIPRVSEDMPLYDILNEFQKGHSHMAVVIRQTNANYAAEPPANDGGTLEVAISIDDKHGEKVVKNLPPLRRWKSCPNSQNSNRGNRNRKWSKDQSDVLQIHEEPLPTLNEDEEAVGIITMEDVIEELLQEEIYDETDVHVEEQ</aaseq>

Gene Sequence

<dnaseqindica>1..178#930..1006#1104..1187#1274..1387#1529..1615#2363..2502#2595..2682#3538..3611#4144..4277#4392..4633#4929..4973#ATGGCGGTGGAGTACCACTGCTGCGGGGCGGCCTTCTTCGAGCACGTGGTGATCATCGTGGTGCTGGTGCTCTTCGCGGGGCTCATGTCGGGGCTCACCCTGGGGCTCATGTCCCTCAGCCTCGTCGACCTCGAGGTCCTCGCCAAGTCCGGCACCGACCAGGACCGCAAGCACGCAGGTGCGCGCCCTGCCATTCCCCTGTGCCCGCCCCGCCCGACAGCCGCCTGGGTGTATTCCGACGGGCGGCGGCGTTCGTTGGTGTGCGTGTCGTGCCTGATTAGATGGGTTTCTGGTAGGATTTGGCTGCAACTTTTCCGGGCTTGGCATTTCGTCGAACATCCCGCGGGCGTCGGTCGGACCGATGAATCGATGCATGAACGTTGTTTTGTGATGAATTTGGCGAATAGAGCGGTTGTTGGGAGGGTGATTGGAACGTATGGGTCGTATAATTTTTTTTTTGGGCGATCAATTCATGCAATCTACACGCGGCCTTCCCGTTGTGCCTACTTTTGGTTGTGCCTACTTTTGGTTGATCAATCCATGCGATTTTAGAGGCGGCCCAACAAATTTTTGTGTACTTTTTGTTGCGAAGGTTTGGCTTGATCACCTGGGAAGTGGTCGTATTACTGCTGTTTTAGGTGATAGCGACATACTCTGCACTTTCTTATTTCGGAAAGTAAGACCTAGTGGCATAGAAAAAGTAAATTAAAAACACCCTGTAAAATCTAAAGTAAACCCTGGTACTCATCTAATTTTTGTTTTCTTTTGTTGCTATGTTAGGCGATCCATTCTTGAGCTATTTATTTGGCTGAATGAAATGCATATGCTTCATCTTTTTTTTTTAAATATGTAAAATGGCATGCGTCAAATGCAAATCTTCTCATATTTTTGTGAAACTGCTCATCTTAACTTTTCTCTTTTCTTTCCAGCTAAGATATTGCCTGTTGTGAAAAACCAGCACCTTCTGCTATGTACTCTTCTGATCTGCAATGCTGCAGCCATGGAGGTATTTGGCTTTATTTCAAGCTATTTGTAGACCGGTTAGAGCTTTAAGGTTCTCCAGATGAATGAACATGTGATGCCATGCTTCTGTATGTTGCTAGGCTCTGCCCATATTCCTTGATAGCTTGGTGACTGCTTGGGGTGCAATTTTGATCTCAGTGACATTGATCCTGCTGTTCGGTGAGGTGAATTATATATACTTTACTATGATGTTCAGCTACAAGCCTATATTTTTGCACCCCATGCTAATATTATGTTCTGGTATAAACAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGCTCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCATATCCGATAAGCAAGGTAATTATACTCGCAGACTCTGCAATATCATTACATCAGTATACTCAAATGCACATGTATTAAATATATTTTACTTTCTTTTTTAGCATCAGTATCCTCGAATGCACATGTATTGAACATTTTTTTACTTTTCTTTTTCAGCTGCTGGACCATCTGCTTGGTAAAGGTCATACAGCTCTATTCCGTAGAGCTGAACTAAAAACACTCGTGACCCTGCATGGAAATGAGGTAAACAGAAATATTGTGTCTTAAAGAAGAAATTAGATTATTGCTATTATCCTATGTATGTGAGACTACACGAAATTGTAGATCATAGACAGCTCCACTTTTTAAGAATTTCGGGTGTTAAATTGTTAATACCTCTGTATATCATCCGATCTACGTATGAATTACCACAGTCAGGGTTCTGATTCGTTGGGTTGTGTGATGTGCAAAAGCTTAGGTTTGGAGATTCTATGTGCTATTTTGAAGTAATTTATTATCAATATCACTTCCAAGGAAATAACAAAAGAAATACAAAACATAAAAAGGAAAGGGAGAGTGAACTTAGTGGAATCTGATGCATTCCTTCCTCACCCTAAGTGGATTTTGACTCAGAGGGCATAGGCATGCTGGAATATTACTGATAAACATGCTTTGCTTTTTTTTCCCCCTAACCTTTCATGCTTTATACGAAGGATATGGTTTTACTTCATAGGTTGTGATTAAATACTCATGTCTGCAACCCCGGTTAGAATATAGATCTTAGATGTCCTAATGGAGCAGGTCATTTGGTTGGTATTCTGCTTACAGGCCGTCCACAGTCCACACTTGAAACTGGACAGGCTTAGAGAGCTAGTTGGTCTTACCTGTACCAATCATTGACTTAGTCATGTAAAAAATGAATTCATGTTTATTGATCTTCCTATTAGTTTTTGCATGAGTGTTGAGGTTACGGAAATCTGTTTTATAACTGTTTTACTTCAATTTCAACAGGCTGGTAAAGGTGGGGAGTTAACCCACGATGAAACTACTATAATAGCTGGAGCTCTTGAGCTTACTGAAAAGAAAGCTAAAGATGCTATGACACCCCTATGTCAAACATTTGCTATTGATATAAATGCAAAGCTTGACAGGTATTGGTTGCGTTACAATTACACATGATTTAATTGGCCCTACCATATTCTTTTCTCAACTGCATAATCCTGTCATTCATGTTCTCGTGCAGGGATCTAATGCAAAAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGTAATGCTATCTTCCTTTTCAAAACAATCATACGATTCTTGTAAATTGTATCTTGTGTTTTGTCTGGATGAAACTTTTTTTTTTAGTTTTCTCATATTTGGCATCTACCTGTTTATGCCTTGTAGCATTAGATTGAGCAGAACTTGATTAACAAATTTGGCAAAGAACCCAAAATCACTAATTACCATCCAGATATGATTTATGTGCTTCTTATTTAATTTAATACATCAAACCATATGGTTTGTCAAACTCTGGATCGAGTATAACCATTGAAGTGCCACCAGTTGGAGTAGATTCTTTTTAGTTGTAGTTTTATTATGAACTGGCATGCAACATTTTCTCAGCACAACGATAATTCTTTTATTATGAACTAGCATGCAACATTTTCTCAGCAGAATGATAATTCTATAGTGTACTTAGCTGTGTAAATGAGCATAAATTGTGAAGGAAGGAGGCATTCAAATTAGCATGTTATAAGTTGCAGCTGGTAAATGTGCATTTAAATTTTAAAACAGGCAGGACAGTCAACACCCTGCATCTGTGCCATCTTCAAACAAAATGCATAGCGGTAATGTGTCTTGTATGACAGATCTGTATGTTTTGAGAGCATCCATGCATTAGATAATGTTGTGATGTGGATCAGTGGATCTGCGCTCTTCAACAAAAATGGATAGCATTATGTGTCTTGTATGACCGATCTGTATGCTTTGAAAGCATCCATGGTTAATGTTATGGTGTGGATCACTGGATCTTGATTTGAGCTGCTAGTACATTTACATTAGGTTTGCAATTTATTTATCTGGCAACTTCAGATATGTAATTGTGTTGTACTCACCTAAAATTAGCAATTTTCAGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCGCAAAATTCCTCGGTACGGTATTAAACTGTAAATTGTTCTTTTATCCAACAGTGCAACATCTTAATGGTGAAATTGTTCAATACAACTGAATATTCCTCTCACTATGAAATTAATGCCTGCTAACCACTGGTTTACTGCAAACACAAAGCAACAGCTGATATAATTAGGTCATCTGCAAATGCTTAACTTATCCGTAGTTTTGTTGTAATTTGTAGTAGAAATGAATTCTGGCATCTACAAAAGGGAACTAATTTATATTGCAAAATGGAGAAGTTAACAGATATGGTGTATAATAGAAATCCAGGAGATAGTTCTGTTTTCTTCCTATCATATTGCAGGCTTGATCGTGGTAGAATATGGCAACAGTATCTCTAATAATAGTAGCAAGTTACTAAATGACAGTGTTAGTAGCTAATTTCTAGATTTACCTGAAGTGCCTGTTTACCTTAATGAAATGCTTGAAATGGAATAATTGAACTTGAACGTATGGTAGTTTAAGATTCAGCATTTCAGCTAACGCAACCTTCATCTTGTTGAATGTCAGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGGTGAGCTCCAAGGCAATTTTCTTTCTCAGTAGCTTGCATGTGGCATATATATAACAGCCTTTTATCTTACCATTTTCTCCTTGTTTTCTTTCTTTCTTTCCATGTGGAACAAAGAGGTTGCGATCTCAATTGATGATAAGCATGGTGAGAAGGTTGTGAAGAATCTTCCTCCACTAAGAAGATGGAAGAGCTGCCCCAACTCTCAGAATTCTAATAGAGGGAACAGGAATAGAAAATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGTTAGTAGTTTGCAAATATTCTCTTTTTATTAGAGGTTTGTAGAACTGTCCGTTTGTTCAACTCTATTTGTTTATTTAACACATGCTCAGTGGCGATTCAACACAGTAAGATGCGGATGATCAGCCAATCATATACTACTCATAAAGTAGTTACTTTCATGTTTATATGTCCAACCATTGAACCATGAGATGTGCTGAACTTCAATGCCCTACATAACTGCTCTAAAATTAAGAGTAGTTACAATGACATTGTGCAATATTATATCATTAATTCATATTTTTCATGATGGCACAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013305