Os12g0486900

From RiceWiki
Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0486900| Description = Protein kinase domain containing protein| Version = NM_001073320.1 GI:115488601 GeneID:4352236| Length = 4644 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0486900

Description

Protein kinase domain containing protein

Version

NM_001073320.1 GI:115488601 GeneID:4352236

Length

4644 bp

Definition

Oryza sativa Japonica Group Os12g0486900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18260767..18265410

Sequence Coding Region

18260790..18260868,18261201..18261423,18262121..18262247,18262355..18262582,18263949..18264095
,18264292..18264410,18264874..18265300

Expression

GEO Profiles:Os12g0486900

Genome Context

<gbrowseImage1> name=NC_008405:18260767..18265410 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:18260767..18265410 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttgtggattcgaaagaaaagttgctttgcttcgagtatctacgtaatggaagccttcgcagtcatcttgatactgccggatcttgtgtgcttcaatggcagatttgttaccaaataatcaaaggtatttgcctgggtttgcactatctgcatgagaggaagataattcatctagatctcaaaccagataacgtactgctcgatgacagtatggtgcctaaaattgcggattttggtttgtcaaggctcttgagtgaagaaaaaagccgcatggtcactgagagaatttttggaacaaggagatacatggcacccgaatacttagttaatggagatatcacagtcaagtcagatatatacagcttgggtttgataatcagagagatggtgatgggtcctaataatgaaggaacaacgacagaaaatgtactagaaatctggaggcataggttggaacaggattcatcaaagatgaggcagacgccaatcgaaatgcgttaccggcaaataatagaagcgtgcattgagatatcagagacatgcatagcgggtaaaccagataagaggccaaccacaggggatatccttcgtcggcttgagaaagaggaagcagggaattggtctatcgtcccagttactccagttgtagattggataagctcgctatccaggttgatggagagcataaagcgaatggctgtaacttcacccgaaccgcgaacaattcgaggtgaggagtccaaagcgttgcaattgcaacctgggccttctcagccaggggacaggagaccagctgataagagtttttggttggatgctacaagcaacgccaagtgctacatgctatcatcgagattattaaaggttacatggggagaaagccccgagcactggaaatggatcaccctccccgattctaggtttgccgaatgcgcggagctcctaaacgtgtactggctggcggtgattggggagatcgcaacggaggacctgacgccgggtactcgctacgcggtgtacctggtgtacaagctgacgggcacctccgtcggcctgagaggtggccagacgcagaggtcatcgctcaggctctacggcgagatcaccgtctccaccggcaaggtcagcgtcgacgtcgtccctgcagcggcgcgcggaatggccgccggcgtggcctatcctgtggccaggggagacggctggatggagctcaagctggccgagtttgctgccgacgagaagctgctcggtgagaagaaggtgatagtggacttccgcgaggagaacgaccatgtcaagaagagtggtcttgttatagagggcatggagttcaggcccaacaagtga</cdnaseq>

Protein Sequence

<aaseq>MFVDSKEKLLCFEYLRNGSLRSHLDTAGSCVLQWQICYQIIKGI CLGLHYLHERKIIHLDLKPDNVLLDDSMVPKIADFGLSRLLSEEKSRMVTERIFGTRR YMAPEYLVNGDITVKSDIYSLGLIIREMVMGPNNEGTTTENVLEIWRHRLEQDSSKMR QTPIEMRYRQIIEACIEISETCIAGKPDKRPTTGDILRRLEKEEAGNWSIVPVTPVVD WISSLSRLMESIKRMAVTSPEPRTIRGEESKALQLQPGPSQPGDRRPADKSFWLDATS NAKCYMLSSRLLKVTWGESPEHWKWITLPDSRFAECAELLNVYWLAVIGEIATEDLTP GTRYAVYLVYKLTGTSVGLRGGQTQRSSLRLYGEITVSTGKVSVDVVPAAARGMAAGV AYPVARGDGWMELKLAEFAADEKLLGEKKVIVDFREENDHVKKSGLVIEGMEFRPNK</aaseq>

Gene Sequence

<dnaseqindica>24..102#435..657#1355..1481#1589..1816#3183..3329#3526..3644#4108..4534#tggtacgaaaaggaagggaaaatatgtttgtggattcgaaagaaaagttgctttgcttcgagtatctacgtaatggaagccttcgcagtcatcttgatactggtataactatatgtgatccatttgctccatttatgatgttcattctgagtaaaaatatttacattgtggaaaaagtaatagaaaaccactagtgtatcggtaaatacaacatagtaataagaggtttgttgacctaaaattgtgcaaatataattaactccaaatttgagttgcgggcaaaattatggtatctacatggccagccaccactatatattgtaatggtcatatattcgaagtgcatggcaatggtgtgccaaaataaaaggcattatgaataattttgcaatttatactacaaggctatgatgtactatttatttgtcgtacagccggatcttgtgtgcttcaatggcagatttgttaccaaataatcaaaggtatttgcctgggtttgcactatctgcatgagaggaagataattcatctagatctcaaaccagataacgtactgctcgatgacagtatggtgcctaaaattgcggattttggtttgtcaaggctcttgagtgaagaaaaaagccgcatggtcactgagagaatttttggaacaaggttagtcaagtatgtgtgtgtgtatatatatatatgtgtgtttatatacatatgtatacatgtatatgtatacacgtatatatatacatacgtatatacgtatacatgtatacatatgtatatatatacacatatatatatagagagagtaaaattaactcaggctccatggtgcacggtgcacgggctctaaaattcaaattgaatatatacctaatttaaatgagtttgaattttttttatatgtttaggtatgaatattaacttccttactaacaagttcaaacaagtttgaactgagtttgaacaatttttgttagattttagttctaggtatataacatccaaacatattattagttaggtatgtaataatgaattgtgaatataaagttgagtttgagttgttttcgttgataggtataggtatgaatcaaattcttatatctaggtatatactcacaatttgaaaattttaaaaaatttaagagaatttgtgtgtttcatataccttggagtccgggcactatgtagtcccatatatatatatatatatatatatatatatatatatatatatatagagagagagagagagagagagagagagagagagagtttcatatatctttgcaaatgagttttcccgtggatccgctttccttggacctgagattacaggtgtccattgatgcaggagatacatggcacccgaatacttagttaatggagatatcacagtcaagtcagatatatacagcttgggtttgataatcagagagatggtgatgggtcctaataatgaaggaacaacgacagaaaatgtatattcaagaagaaataattaataatcagtactacattttagattgtttgagttaatactactacgtgtgtaactttttgctaatgaaattgaattgcttgtcaggtactagaaatctggaggcataggttggaacaggattcatcaaagatgaggcagacgccaatcgaaatgcgttaccggcaaataatagaagcgtgcattgagatatcagagacatgcatagcgggtaaaccagataagaggccaaccacaggggatatccttcgtcggcttgagaaagaggaagcagggaattggtctatcgtcccagttactccagttgtagattgggtataaataaatcatctcttactataaaattattttatagatcactaattcctaaaatttaacatgcaaacatatcatatcatcatcaactaataattataataattatagtcgatataccgagttttcattgcaaacccccaagatattattactacatactaaggataacaacatttaaacatcatgcaacatgcatgctatattattataatttattaatctaatagttttagagatttaaaatgtaaacttgtcaaatcatcttacataattcgcataatgtttcagtatttctctccattatttttctataatatcctatatacctatatagttcatccttatttagtttatgatatttttcttttctcattaagtcatagcacatcaattatttttagtccttagatgattaatttatggttcaaattatctcttttcttttcttctctcattgagttatattatctcaatttttttagcacttagatgtatggtctaaattatcttcttttgtttcctcataaagtaacatcatcttacttttatatttggatcatcattctatatactatttaaatttaattcacattaacttacgtaaacttatgtttatttaagattatgttgtttaaactatctcacacttttttttttactcatttttatcatagtaaatttcgcaacagcgtaagggatttcatctagtatgcatatatactatcatgtcgcttgaacagtacatctttcattcaaagattcaccaagtacatccaaaaagctttagatgatgacgagtatactgaaaagtaattaccgtgagcccgaatgtttggctgaatataagtactccctctgtaccaaaataaacgtaaccattagtttccacatataactttaatcgttcgtcttatttattttttttaaaaaaataaaaagcataagtcaagtataaaatactattcatgttttataatctaataacaataaaaatactaatcataaatttttttaaataagacggatgataaaagttggacacggaaactcatggctacgcttagggctgtttggatgggggactaatctttagtacctgtcacatcagatgtttggacactgattaaacatagactaatgacaaaactcatttcataactctggaataattcgcgagaggaatttgttgagtctaattaatgtaattcactgggagtaccaagcatagacacaggcaaataagggaaagggatgtcttaactgaaaacagagaaagacaaaaaaactaacaacaggctctttcattgccgatcatttacttcgaatggttctgtgattagattttattttgcttccgtggcagataagctcgctatccaggttgatggagagcataaagcgaatggctgtaacttcacccgaaccgcgaacaattcgaggtgaggagtccaaagcgttgcaattgcaacctgggccttctcagccaggggacaggagaccagctgataaggtaaatgaagaaacaaaagcccaaataaatattaataaattgatttattaacatttatataaatatagacaatactagaaattattatattgtaaaacggagggagtagtactgacagacatttacagaatctactgtggattatacttggtaccgaacaatccaaatttttatattggttgacgaacgcatgtagagtttttggttggatgctacaagcaacgccaagtgctacatgctatcatcgagattattaaaggttacatggggagaaagccccgagcactggaaatggatcaccctccccgattctaggtaaggtttccatactgagcaaactttcaaatctctacatttcatactataagtctttgactattttcttactgaaagtactttaaatttgccctatgtttatagtaaaatataataatacctttaatataaagcaaacattgtatcaaaatatatttgatgctaaatttaacggaactaatttggtatcataaatgttgctaattttttctataactttggtcaaaattaaagaaactttgagttaaaaaaagttaaatgacttacaatatgaattgaaacggaaggtttattttctccgttggaacaaaggtctattttccaaatccatgaaacaggcacatgtatattaatttgttttgttttctctgctggtaaaatacaaaggcttgttaatttccaaatcctgaaaacatgcacatattaattttttgtgttttatttttcctctgttggtacaaaggtttgccgaatgcgcggagctcctaaacgtgtactggctggcggtgattggggagatcgcaacggaggacctgacgccgggtactcgctacgcggtgtacctggtgtacaagctgacgggcacctccgtcggcctgagaggtggccagacgcagaggtcatcgctcaggctctacggcgagatcaccgtctccaccggcaaggtcagcgtcgacgtcgtccctgcagcggcgcgcggaatggccgccggcgtggcctatcctgtggccaggggagacggctggatggagctcaagctggccgagtttgctgccgacgagaagctgctcggtgagaagaaggtgatagtggacttccgcgaggagaacgaccatgtcaagaagagtggtcttgttatagagggcatggagttcaggcccaacaagtgaagctcgcaaaaggctcaacattttgttccacaagaacaatttctagtatcctaactattctcagcacataaaatgacaagttttatctctttaatatactttatctatct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0486900, RefSeq:Os12g0486900