BGIOSGA013334

From RiceWiki
Revision as of 10:00, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013334| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013334, complete gene.| tag = OsI_130...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013334

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013334, complete gene.

LocusTag

OsI_13028

Ensembl Transcript ID

BGIOSGA013334-TA

Ensembl Protein ID

BGIOSGA013334-PA

Length

8467

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31061103..31069569

Sequence Coding Region

31061103..31061114,31061202..31061281,31061384..31061498,31062470..31062521,31063470..31063609
,31064124..31064234,31064315..31064440,31064949..31065116,31067113..31067208
,31069227..31069397,31069486..31069569

Genome Context

<gbrowseImage1> name=IndicaChromosome03:31061103..31069569 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:31061103..31069569 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACTCAAGGAATACGAAGAAGCTTGTACTGCATTCATGGCTGGAACAAAGCTCAATCCTTTAAACGATGAAATGCAGGATGCATTTTGTTGTATGCTGCGTGATATGTCAGTGATTATGCCTCTGACTGAAACCAACCCATATGTTGACATTTGCAGGGAGGCAGCTAAAGGAATGATGTATGAACATATGGCTGGAAAGCGCAGGCAACATATGAAACATTATAGTATTTGTCCTAATCTTTATCTAAGAGCAGGTCATGATGAAGTAGCACGACTGTTGCTATCTAGAGGAGCTAGCATTGATATAGCTTATTTTCATGGGACACCACTACATATTGCTGCTGCATATGGGAAGGCTGGAGTCATGAAAGTTTTATTGGAGCACCATGCAGATCCAAACAAGGTTTCAGAAGAGTTGGGTACACCGTTGGTTGCAACTCTTCATGCTACTTCTCAAGGACTAGCTGAGTCTGTTTCATTGAAGTGTGTAAAACTACTCGTCGAGGCAGGTGCTGACGTTAACTTCAGTGATCGTGACACTCCGTTGGTGGTAGCAATTACTAATGGCTTGACTAACTGCATTAAATACTTGCTAAAGGCTGGTGCAGACCCTAATATCCCAACTTGTGATTGTGGTGCCTTGCCAATACAACTTGCTGCAAGCTATGGAAGAAGAAAGGACGTGGAGTTACTGTTCCCGTTAACTTCCCCCATTCGAGCTGTGTCAAACTGGACCGTTGAAGGAATTCTTGCCCAGGCCAAATCGGAACATGCCAAATCAAAATGTTCAAAGCCCAAGGAAGATGGTCAGAATGAAAAGGCTCAGCTCAAACTATGTGGTGACAAAGCTGTTAAGAGAAAGGACTACCGTGGTGCCTCAAATTTCTACAGTCAGGCACTTGAGCTAGATTATTTTGATGCAACCTTGTATTCAAACAGAAGCCTTTGCAACCTACAAATTGGAGAAGCACAAAAGGCTTTGCTTGACGCAGATAGATGTGTAGAACTGCGGCCTAAGTGGGTGAAAGGTCACTACCGGGAAGGAGCTGCTTTGATGGTGCTAAAGGAGCACAAGAAAGCATTTGAGGCATTCTTGAACGCGCTGAAACTGGATCCTGCTAATGCCGAGACTGAGAAAGTGATGTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MALKEYEEACTAFMAGTKLNPLNDEMQDAFCCMLRDMSVIMPLTETNPYVDICREAAKGMMYEHMAGKRRQHMKHYSICPNLYLRAGHDEVARLLLSRGASIDIAYFHGTPLHIAAAYGKAGVMKVLLEHHADPNKVSEELGTPLVATLHATSQGLAESVSLKCVKLLVEAGADVNFSDRDTPLVVAITNGLTNCIKYLLKAGADPNIPTCDCGALPIQLAASYGRRKDVELLFPLTSPIRAVSNWTVEGILAQAKSEHAKSKCSKPKEDGQNEKAQLKLCGDKAVKRKDYRGASNFYSQALELDYFDATLYSNRSLCNLQIGEAQKALLDADRCVELRPKWVKGHYREGAALMVLKEHKKAFEAFLNALKLDPANAETEKVMW</aaseq>

Gene Sequence

<dnaseqindica>1..12#100..179#282..396#1368..1419#2368..2507#3022..3132#3213..3338#3847..4014#6011..6106#8125..8295#8384..8467#ATGGCACTCAAGGTCAGAAAAGAAAAAAAAAATGCAAGTTTTTCGTTGTGTGATACATCATTTCCCTGTCATTATCTTATCTATGTTTTTATATTCCAGGAATACGAAGAAGCTTGTACTGCATTCATGGCTGGAACAAAGCTCAATCCTTTAAACGATGAAATGCAGGATGCATTTTGGTAATCTTTGTACCTATTTTACTTTATAACACAGATTTTCTTAAATGACCTCCGACACGGTTCCATGAATCAAAATATGCTAATTCATGAATTTTTTTTCAGTTGTATGCTGCGTGATATGTCAGTGATTATGCCTCTGACTGAAACCAACCCATATGTTGACATTTGCAGGGAGGCAGCTAAAGGAATGATGTATGAACATATGGCTGGAAAGCGCGTCAGCTCGGTTGATTAGAGGTCATCGGCGTGTTCGTGCTCTGTTCTGTTTCTTTTGGACCCGAATGTCAGCTTGGATGGTTTAATTTCGTGTTAGTACTTGTGTCTATATGATGTTTCTCGTTGGTTAAGGACACAGCGAATTGGTGGTGGAACAAGGGCTCGATTCCGCGTGGAACCGATGTTTTCACATAACATTTCTTGAAACAGTACTTAACGTTACCTGTTTGCATGAGCGTGTTCTTTGATGATTGTATCTTGGTGAGAACCATGCTGTATACGTCTTACTTTGACTTTGATCAAAGCTAAACTGTTTTAAATCTGACCAAATTTATAAGAAAAGATAGTAATATTTTTTATCTAAGATAAATTTATTATAAAAATATATTTAATTATTAATTTAATAAACTAATTTGGTAATATAAATATTATACTATATTTTTATACTACAAAATATCTTATAATCTAAAACGGAGTCAAAATATCTTATAACCTGAAAACGTCCGCCGATCCAGTTCATCCCACGCTCCGCCTCTACCCCCTCTCACCCACGTTCCCGCCTACCTCCCTCCTGGCCATCCCATAATAAAAGCGCCTACCTTCCTCCTGGCCATCCCATAATAAAAGCAGCTTTGGCCGCGAGGCTTCTCCTGGAAGGAAACCACTCTTTCCTCCACAAGTCCATAAGGACAGCGAGAAAACCCCAAAAAATTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTAAATTGATCTATTTTATTCACTTACGAAGAGACAACCCATACAATATATCACCTCTAGTACATAAATACCAATATCTCTAATACTCTCACATCCTTGTTGAAATTTGTGTGAAGGTTTGCCTTTTAATTTAGGGGTGGCTCATATTATCTCTCCTCACTTCTCTCCTCCACCTTATCACTCAATCCAATGTGACACTCTTAGAGGCAACATATGAAACATTATAGTATTTGTCCTAATCTTTATCTAAGAGCAGGTACAAATTGTACAATAGCAAGCTATAAGCCAGCTGCAAACATATTTTAAGGAGATAGATAAGGAGAGAGAAGAGTAGCGGGCTACAGATTTGTAGCCAGCTGTAGCACGGAAGCCAGCTGCAAACATATTTTAAGGAGATAGATAAGGAGAGAGAAGAGTAGCGGGCTACAGATTTGTAGCCAGCTGTAGCACGGACTCCAAGACGCGGTGTGTGTATGATAGATAGGACCAGGTATTAATAGTGTACTAGTATATAACTATTGTATGGATGAGCTATTAAATTGACTATAAATGAATTGGAGTTAGTAGTTGGTTATACTATTAAAATTAAACTTGCTCTGAACGGTCCGTGAGAGGGACAATATATTGAACATTAGTACTTGCCCTAATCTTTTTATCCAAACGGCCCATGAGAGTGTGAGACGCGCAGCCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGTGCGGAGTCCAGACCTGGAATGCCGATTAGCATCTCTGTTCCGTTTTTTATGCCACTTCTCTGACAAGCTAGATGAGCTCACTCACATGTTTTGATTTTTTCTACGAGTTGGTATATCTTATACATATTCCAGTTTTACTTATTTTCATTATGAATATTAGTAGATCCTGGAACTTCTATTTGCCTTGTTATAATAAAGTGGGAACAAATATATTCTTGTTCGTGCGATCAGTTTCCCGAATGATCGTATTGGATGGCATCTTAAATAGTTCATTTCAGCCAATAGCCATCAAGTAAAAGATGCATGCTTTGGTGTCTAGGTAGGACAGTAAAAATATTATTTTTATGAATCATGCATCTTTTAAGAATATATATATTTCTGTTGTTTAGCCATCTGTTTGATAAATGCTTATTTTCATGGTAATTTTGTCATGTTATTTTTGTGCATCTTGTTTAGGTCATGATGAAGTAGCACGACTGTTGCTATCTAGAGGAGCTAGCATTGATATAGCTTATTTTCATGGGACACCACTACATATTGCTGCTGCATATGGGAAGGCTGGAGTCATGAAAGTTTTATTGGAGCACCATGCAGATGTAAGTAGATTCCATGTCTTCTCATATTAGCTTTTGGTGCTAACTTGGTACAATGCAAATGCATTTAGTGTTTTGGATCACAGTTTCATTTAGTATTTCTCTTGTGAACCTTGCCACTCAAGCTGGTGGGGTGATAAATCTTACCCATGCCATGAAAAACGTTTTTTTTTTGTTCCAATTGATCAACACACTCCATATACATTTGTGTTGATGAAAAGCTGTTGTTGCAGTTGACACTTAGCCATGTATTGCAAATTGCATAGGACTAATGATTTTGTTGCCCGATTTCTAAATAAAATACGGAGGTTCATGAGAAGAGCAGATACTTTTTAGGGAATGCACAAAAGGATTGCCCATATTTGTATTAAGAAGAATAACCGCATGCTCCTATTTATATTTTGCAGGATATATTTTGCATCTATATTTATATCCCAACATTTAATATCTGGCATATTATGTAATTAATGTAATTCAATATGTTTTCACTAAAAGCAGTATTTTTTTCCCAATTTAGCCAAACAAGGTTTCAGAAGAGTTGGGTACACCGTTGGTTGCAACTCTTCATGCTACTTCTCAAGGACTAGCTGAGTCTGTTTCATTGAAGTGTGTAAAACTACTCGTCGAGGTAACTTGAATCCTCTTTATGTGATCAATCTATTTGTATGAACAGTGGCATTGACAATTTTGTCTGTTTCATACAAATAGGCAGGTGCTGACGTTAACTTCAGTGATCGTGACACTCCGTTGGTGGTAGCAATTACTAATGGCTTGACTAACTGCATTAAATACTTGCTAAAGGCTGGTGCAGACCCTAATATCCCAACTTGTGATGTGAGTTTTTGTATTCTTTTGACTTCCTCATTTCCTTTTCTTATCCAAAAAGTTGTGACCAATGCTAGATATGCCCCCATTATACATAATTATGGCTTATCACCTTGAGCCCTTGGGCCTTGACTGTCGAGAATTTGATCTGACTACTAATATGAGTAGCTAAAAGGTTGAAATGAATCGTGCTTGTACAAATAATTAAGTTCTTTTGCGAGTATGTAATTGGTTTTTGGTTTGAGTGATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGTTTCGAAAAAAATATCTCCATCTATTTGTGCACATTTCTATTTATTAATGGCTTATATACTTCTGCTGTTATTTGTATAATGAATGCTTGTGATATTCCTGCCTTGGTCTATATTGCTTTTGAGGTAGTAGTTATATAATTGTTGTTCTGTTACTTTGTAGTGTGGTGCCTTGCCAATACAACTTGCTGCAAGCTATGGAAGAAGAAAGGACGTGGAGTTACTGTTCCCGTTAACTTCCCCCATTCGAGCTGTGTCAAACTGGACCGTTGAAGGAATTCTTGCCCAGGCCAAATCGGAACATGCCAAATCAAAATGTTCAAAGCCCAAGGTGTGAGTGAAAACAATTCGTTGTGACTGTTCTGTATTTCCTTATGTGCCTGTCAATTTTTTTATAGCTTAAATATTCGCACCTATGCTTTGGGTCACATGAATGTATTGATGATATTGTTTTCTCTAGTGCATATTACTCCCTCCAGTTTTATATTGCTATTATTGAGGTTCAAGTTGGGATTGTAGAAGTATGAGCTGCCCCTATGAAATGGACCCACATACATCTAGTTTCCTATTATTATGATCGAGAAACAAAGAAACACATATTAGGTCTTGCTTGATCAAGTCTCCTAGCTAACGGGATAGGCCTACCGCCAACAAAATCTGGTATGGCTAAGTCCTAGTCTTTGGACCCTTATGCTTGGGTATTGATTCATGGATATGGTACAAATCCCAAGACTAGGATGGAGGTGGAATTGCTCTCATCAATGGTGAGCTTCCCAAAAGCTAGGAGGTTGTGATCAACCTAAGTGTTTGTTGATTGCTTGATCGTAATAATTGCATTGGGTCCCTTTCACATGGATGACTCAGGATGCTGTAGTTCCTGTGGGACTGCTCATGTTAGCTTGATCCGCAATATTGGATCCTTACATTCCTTACCAATTAGAAATTTAGAATACACAATAACTAATCCCAATGTTAGGAAATTTATCAATTATTTATTCGTTGAATATTCTTATTTTGATAAGGAAAGCCTTAATCCTGATGATAGGTATATTCTGTACTGTTTGAGCTATACAAACACTCATAACACAGAATGTCATAATCTTATCCCGTGCAAGGAGGGTAGTTTTTTTTTTCTAGATTCCTTTCATACTAGTCAGGGCAAGGAAAACTGCCAGAGAGTTTGGTATGATTTCTACTTTTTGACATAGCAGAAATGAAGAGACTCATTATTTGTTGTTTTAGTTTTATTTGAGAAGTACTTGATGTGATGTTATTTGGTGATACATAAGATTTGCAGAAAATCTTAGAAAAATTGGAGTTTGCAAAGAATTAATGACCAGTAACTGTCTAGGTATTGACCAATAGCTACACATGTGGTCCAAAAACATAAGCTCAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTAAACCGAATGTTTTGTCACAACTTCTCTTCTTCGAAGCATGATAATTCTTGGCTTGCAACTTGGATGAAAAAAAAAACAATGGGCCACACATCAATTTTAAACAAGCAGTTGCGCTAAACGAGGTTGTTATAATCAAGCTTTATGCCAAAAGTAATCTAACCCAGATCAGTTGATCATATTTGTATTATGAGTAAGCTAATTCATGGTATGTACAGAAATGAGTTGGCTAGAGATTAATTAATGTCATCCCGCTCCTAGTCCTAGCTGTTGATCTTATTATATTTATCCAATACAGGTCGTATTAATGCTGGTACTGTTTCAGGAATTACTCTGGATTGATTAGTTCTTCTTGTGCAGACTATAAACTGTGGTGTTTGGTTCATCATCACTGTTTTCTAGACAGCGTGGTGTGGCCTCTATTATTTGATCCATGGAAATGGTGTTGCCTTTGTAGCACCTATTGGCTTATTTTTGTTGCACCTGCGTAGTAATTAGTACCAATTTTTTCCAACTATATGTGAATGAGATATCAGGTAGAAACTGATATCACCCTTGTGGTTTTCTATTTTGAAACATACAAGAGTGGGTTATTGTCTTAGTTTTTGCACCTTATATATTGTGGTTTCATTTTTAAATCAAAATTCGATATGCCTTATATTGCTATATAAAATTGTTTCATGAAATTATTTTTTATCTTCAGAAGATTTTTGATATGGCTTTTATTGCTATATAAAATTGTTTCATGAAATTATTTTTTATCTGCAGAAGATTTTGTACATTTAATGTTGGTACATTGGCTAAATTGGTTTGTTTTCGTGACGTAGGAAGATGGTCAGAATGAAAAGGCTCAGCTCAAACTATGTGGTGACAAAGCTGTTAAGAGAAAGGACTACCGTGGTGCCTCAAATTTCTACAGTCAGGTATGATGATGTGAGCAAGCCTCATTTTTTACATCAAAGACAGTATGGTCTGTTTTGGATATATCTTCTTTGCAACACATGTGCATAGATGTAGAAAAATACTCTAGTCAAAATATTTATGGTGTTTGACTTTTTAGTCAAACTTTTGAAATTTTGACTATCAATTAATTTTAAATTATTTAGTTTCAAAACATAGAATTGGTATGTTTAGATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTATCTTGGGTCGAAAATATTACTACTTTTTTCTATAAACTTGGTCAAACCTGAAGCAGTTTGAATTTGACCAAAGTCAAAACATCTTATAACCTGAAACGGAGGGAGTAAATTGTATGTCTATTTTCCTATATCTGATTATGTCATGGACATTGGACACTTAGAGTTTTTGTGTGCCTAAGCAAATTGACCAGTTGACAATTTGTAACTGCTTCCTCCGTTTCATTATGTAAGACTTTCTAGCATTATCCACATTTATCTAGATATTAATAAATCTACACACATATATATGTCTAAATTCATTAACACATATGTGAATGTGGGCAATGCTAGAAAGTCTTACATTATGAAACGGAGGGAGTATAAGTCTTAACCAAATTACAAACCATTTTTATAATGTAAACTACATGGTGTTGGATAAAATCTATGGCATCTTCTAGATGTGCCGAAGTTGTTTTGTCAGAAAAAGAAGAATACATAGGAGGGACCATGCATCTTTGATTTTATGGAGTGGGGATATCAACCCTCATAGTTATTTTACGAATAACCTATAAAGAGAAGAAAAACGAGAGACTAGGCTGAAAGATTTGCATAAATAATATTTCTTCGTCTGGGTGCTACTATATTAGACAGCTAGCATATGGAAAGTTGGACACTATTAGCTACGGTGGTTTTCAAATTGAAACTTTAGCCTAAAATGAATTCCTGATTGATGCATTCATCTTTCACCAAATTTCCCTTACTGCCTCACTCTTTTATTTTGTACATATTATGCACTTCTATCTTCAATTTGATGTAGGCACTTGAGCTAGATTATTTTGATGCAACCTTGTATTCAAACAGAAGCCTTTGCAACCTACAAATTGGAGAAGCACAAAAGGCTTTGCTTGACGCAGATAGATGTGTAGAACTGCGGCCTAAGTGGGTGAAAGGTCACTACCGGGAAGGAGCTGCTTTGATGGTGCTAAAGGTCAGAAAATTTGTTGCAGTGTGCTAGTCACATGTTGCCCTTTACATAAGCTTCATGTTAGATCATCCCCCCAATTTTCTGTCCACAGGAGCACAAGAAAGCATTTGAGGCATTCTTGAACGCGCTGAAACTGGATCCTGCTAATGCCGAGACTGAGAAAGTGATGTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013334

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013334&oldid=58157"