Os12g0488600

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0488600| Description = Similar to 50S ribosomal protein L4| Version = NM_001073321.2 GI:297613185 GeneID:4352238| Length = 4917 bp| Defini...")
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Gene Name

Os12g0488600

Description

Similar to 50S ribosomal protein L4

Version

NM_001073321.2 GI:297613185 GeneID:4352238

Length

4917 bp

Definition

Oryza sativa Japonica Group Os12g0488600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18445956..18450872

Sequence Coding Region

18445956..18446186,18447503..18447620,18448082..18448229,18448991..18449069,18449179..18449298
,18449961..18450134,18450273..18450311,18450741..18450872

Expression

GEO Profiles:Os12g0488600

Genome Context

<gbrowseImage1> name=NC_008405:18445956..18450872 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:18445956..18450872 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcgcgctcccgcggggcgccgccgcctcgctcctccgggcggcggcggccgcggcgccgtgccgtccgcgccccgtgcagttgcagcgccggctccccgacgccgaccgcctcctcgccatggtccgggtgctccccccctctccccacccgctccattcctcttctgatccttcttgtgtcggatgccccatcctttgcggcatcttgatcgccgtttgcttgcagaatattccagctgtctgtttcagtagatattctactcttgtaactccatcagatgaggttcttgtcccaccagaactactatcgagcagaactgttgggacaccagagaggaaaataggccaatatgaagacctggtagctagaataacaaatttcacaatgaggataagggctacatggtgttggatggtgatgtatttgatgttccaatcaggaaggacattgttcatcgagttgtacgttggcaacttgctaaacggcaacagtatattatgcatttatataaagccttacaagcaaaaaggaactggaagagcacgtcatggaacattgcgtggtccccagtttcgtggtggtgcaactatgcatggacctaaaccacgaagccatgcaatcaagttgcaaaagaaggtccgtcgtctgggactgaagatagccttgtctgcacggactgctgaagggaagcttctggtctttgaggacttggaagttcctagccacaagacgaagaacgttgtgagctatataagccagatggaggacacaaagaaagtgctactggttgatggaggcgatatcgataaaaagctaaagctggctactcaaaatctccactacgtgaatgtgcttccttcaattggactcaacgtctacagcatcctccagcatgacaccctctggctgaaggtgggtgggggttgggtggcagccagagcacgagatggtgcagcagttggcggcagcgggaaaatgttctgccgttaccagcatgtccggtgcagcagagaagctggtgtctatacatcgtga</cdnaseq>

Protein Sequence

<aaseq>MRALPRGAAASLLRAAAAAAPCRPRPVQLQRRLPDADRLLAMVR VLPPSPHPLHSSSDPSCVGCPILCGILIAVCLQNIPAVCFSRYSTLVTPSDEVLVPPE LLSSRTVGTPERKIGQYEDLVARITNFTMRIRATWCWMVMYLMFQSGRTLFIELYVGN LLNGNSILCIYIKPYKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLQKKVRRL GLKIALSARTAEGKLLVFEDLEVPSHKTKNVVSYISQMEDTKKVLLVDGGDIDKKLKL ATQNLHYVNVLPSIGLNVYSILQHDTLWLKVGGGWVAARARDGAAVGGSGKMFCRYQH VRCSREAGVYTS</aaseq>

Gene Sequence

<dnaseqindica>1..231#1548..1665#2127..2274#3036..3114#3224..3343#4006..4179#4318..4356#4786..4917#atgcgcgcgctcccgcggggcgccgccgcctcgctcctccgggcggcggcggccgcggcgccgtgccgtccgcgccccgtgcagttgcagcgccggctccccgacgccgaccgcctcctcgccatggtccgggtgctccccccctctccccacccgctccattcctcttctgatccttcttgtgtcggatgccccatcctttgcggcatcttgatcgccgtttgcttgcaggttttagcggcggttttaaggcagcgattccattaggcgaaggcttaaatgccattttgtgtgtagcttttatctatgaacactgctatatgtgctaaattttttcttactaaacttttaataacaatcatcttaacggttcaatttaggtagatggaagttatgataattgaaaaatctagattcactcatagcatgacacattggttttagtaagaatttagtaaaaaaaaaaagttagtatgtatagccttttccagcaaatttagtggtggtctaaagattttggagagatggttgtgagtatggttcacttacttagatacggaaagatgcaggtaaagtaaattaggatcacatttgccgtatctgtactactgtacgcgaaattgttgctgatgatgttttaatagcaatgtttgttcgggtgttgatcttaagctgcattatgcttggccttgtttgcgtcaaaggaaatcaccagaattgtgaattcaattaaccatgtgatatttttagtaaaatatttttctttaagcaggatagagaagcatatgtcaatacacaatattgttcacttaaatagtgatttctggacataaacgactatgttgaacaggagaagttgaactagaggatacaagtacacagttagaagatattttagtctgtgagtcagtcattcggcagtcagctagaactgcaaaatctagtttgatgaatggtgacagatgattgtcttcatggggaaacaaatcccttttctttcacattgcatgatgttgcattgtgtaatgttcaaatgtggataacatgaacaacaaatatcggttatctgaatctacattgtgtttgaaacttcaacattgcttatgttttcaccctacttaatattctctgttctgtcttgcagtgtctagcagatgatgtaattctatgttaacctatctctttgggtttctctaaatagaaattgtgtcctcctttgttaaaaagaagaagaagaagaagaaagaaagaaagattgcatatgttttgttggttgtggctgtttccatgttttgttgattgcatatcttacacttcattcaagaatgccagctttgtgtgtctgctttggctaacttagaacctgcttcgtattaatatactccttttcagaattaaccttctggctgctgcgtttaagtccctgcttttatgatccattaaatctattttatatgtttttgtgtaactttcaagatcttgttacatcaatcagacaactggttttgaacccacttttctaactagatgacgtattttatctgcagaatattccagctgtctgtttcagtagatattctactcttgtaactccatcagatgaggttcttgtcccaccagaactactatcgagcagaactgttgggacaccagagaggaaaataggtgccatctcgattttatccgtcttttcgacctttatgtgttaatacataccatttaaatggtcatcttacagacttacacagttgcacagtagctgcaaaaaggccctctcatcatatatttacagaaaggatagagtggttcactggttaattatatgtttttgctaatcattattctgaggtcctaaacactacaatctaaacaaacttttatgttaaaataaaactttggtgtcacttgtgaactaatgaaaagaatgtgaccagaggataccagattttcaattttgaaatggaaaatttttaatattctctcttaaagcgatgaatagtgccttctccaaatatatatatatatatttatggcttctccaatctttaatattcatatggtacacccatcatcttttttttttttgcttggtgttgtaataaggtttttatgtttttatgttgtaggccaatatgaagacctggtagctagaataacaaatttcacaatgaggataagggctacatggtgttggatggtgatgtatttgatgttccaatcaggaaggacattgttcatcgagttgtacgttggcaacttgctaaacggcaacaggtgtgcctataagatttctccaaaaatgctccatagtgttcagttcatatattcttttatttaggttttttttgtctcttaaatgattgctcaatggtgaacagagtatgcataatgtggaaaatcagttccttgcacattattttcttttctttttcttggaacactgcttgttcttttgagagtccctgctttcttgctatggctggtagttaatgacagaaataattggattcttgcctcatgttttaatggtccaatactccaatatgagcatcaattatcatgactacaatataatattaatcataactgtaatccatagtctcaacttggattttcctgctttatattgctgcctcaccattatgttttattttcttactttagtgtgcatagctaatgcttggtttgtcaaaagaatgtgactgaattgcttatttcttgtctgtacaatgggatactgatagtcccatatccatgtgagcgttgttatgttagatcatttgtttcatgacagggtatgtggaaaattctcacaagtacatgctgcatagttgctctttgttcttttcttatcctgaggctgtcgtactgcaattatgacaatgccattatactaagtgatgacagttaggttaatgccatgtgaatatgtccagaatataaatataaaatcttcaaaagatgactcaaaatgtgaaaataatgtagaaaggatcagctgcaaaatttagttattgtttatattattttcacagtatattatgcatttatataaagccttacaagcaaaaaggaactggaagagcacgtcatggaacattgcgtggtccccaggtttgaacactacttattacattcatataaatttactgagcgttagttttgcatcttatataatatctagttggattttattgaactaatgtaaaccaaaatgatacagtttcgtggtggtgcaactatgcatggacctaaaccacgaagccatgcaatcaagttgcaaaagaaggtccgtcgtctgggactgaagatagccttgtctgcacggactgctgaagggaaggtacagacgtgcactttgtgttcatataagtcactttattacagttgtgttttccaccttatttccttatatataagggccaactgatccgtattccagaagcatgcttgcaatctcagttatcacatacaactcagaatgcatattttgctatctcctttatttgatctattggtaaaactagggattataatgttatttcacattatactggtggagtaatcatctgaggtgttgggttttattgtccctttacctttgttcaggaagacatggcatcatgcttgccttcctaaaagggcgactgaaaattttattcacaaagaactcacatcttattatgcaatgtatccattgcactcaaaattattcattcattttggtacccataaaggttcatactcctgttttccatcttggagatgtttgttagtcaagttttctgaactccaagtattgggcaagttttggatgtcatgagtcgtgactgcatttcttagcctgtgatgtgaaatgctgggcaccgctcaagcagacccattcatacaaatgattgttaaatacatgagcatgcttttctgcaccataccagttcatctatccctgttttgaattgcccaacgaaattttgataagtgaatatttcgtgattttgtacatagcttctggtctttgaggacttggaagttcctagccacaagacgaagaacgttgtgagctatataagccagatggaggacacaaagaaagtgctactggttgatggaggcgatatcgataaaaagctaaagctggctactcaaaatctccactacgtgaatgtgcttccttcaattgtaagtgactgtctagcattttgtatatctttttttaagacaagacgctgagcaaagtctctgcttcgcctctacttccaaagttccaagaggacataaaacatatcatgagaattttttttttctgttttcttgcagggactcaacgtctacagcatcctccagcatgacaccctcgtaatgactcgcgatgctgtgaatcggattgttgagcgaatgcatacccccatcaaccgctagccccttttacggcaatattaatcggtacactgttttttttattcctcaaagcttaaacctgacccactcaacaatatctccaagtctcttgttctctatggcttttcctcctatgatctatcctatagaaactgctcattttgcattccagaatgatagatgccagcagtggtggtgctcatgaaagcaatgcatttcctgggatcacaataaatcgatttaggggggatcctgatcagctcttcccttcatgtatccatatacaattctgattggtaaatcaattgagaatccaaatttcgtattgcatgtcgaaaatattgtcccagatttagattttttgaagctacattacctgggtggcagtggctgaaggtgggtgggggttgggtggcagccagagcacgagatggtgcagcagttggcggcagcgggaaaatgttctgccgttaccagcatgtccggtgcagcagagaagctggtgtctatacatcgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0488600, RefSeq:Os12g0488600