Os12g0488700

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0488700| Description = Protein of unknown function DUF593 family protein| Version = NM_001073322.2 GI:297613187 GeneID:4352239| Length = 22...")
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Gene Name

Os12g0488700

Description

Protein of unknown function DUF593 family protein

Version

NM_001073322.2 GI:297613187 GeneID:4352239

Length

2280 bp

Definition

Oryza sativa Japonica Group Os12g0488700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18452938..18455217

Sequence Coding Region

18452938..18454251,18454958..18455004,18455115..18455217

Expression

GEO Profiles:Os12g0488700

Genome Context

<gbrowseImage1> name=NC_008405:18452938..18455217 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:18452938..18455217 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgactccggcgagccccctccccctctctgccccctctgcggccaccccgccgcctcctacacctcctcctcgtcatcctcgccctcgccgtcccagccgacggcgaggccgccgctgaagaggaaggcgccccccgaggcgccgcccgcggtggtgcgggtggagatcggcgacgaggccgcggcgctgcgcgaggccctggcgcggcagcacggcgcgctcgcggacctccaggcggagctcgacgcggagcgcggcgcggccgcgggcgccgccagcgaggccatgaccatgatcctcaggctgcagcgggagaaggccgaggcgatgatggaggcgaggcagttcaggcggtacgccgaggagaagatgtcgcacgacgccgccgagctcgccgcgctcgaggacctcctcgccaagcgcgacgccgccctccgcgcgctccagtcgtcgtcctcctcccgcggcggtggcggtggccgcggcgtcggcggcggcagcggccgcgccaccccgtcgttcccgggctcctcgccgcaccactacccgtccacgccgacgccggcctccgccgcggcggccgcgaactacccgccgctgcggtgcttcatcgaccacccgccgacggcgtccgaggcggacgcgctcgacgcgcagaccccgcgcgagcacctcacccgcctcgcccaccgcgtccacatgctcgagcggggcgtccacccgatggcgaccaccaccaccaccaccccgatcatccgcgtcgcgcctggctccgccttcccgcgccccacgcgcgcctactccgacgccgacagcctcgaattctgcgacggcgagtacttccccgacgacgtcgactgcggcgccagcgaccgcgtctacaccgtcgacgccatccacggccgcccactggccgtccccgagggctcgtgcacgccgggcgggagctcatgctgcggcggcggcggcgtgccgtgggcggaggacgaggagatgcgccgcctcagcgcgcgcctccaggcgctggaggccgacagggagaccatgcgccaggccatcgtctccatgggcgccgagaaggcgcaggtcgtgctgctcaaggagatcgcgcagcagctctgcaaggaggccacgccgccgctgccgccgtctgcggtgaccgtcggccaccacctctacaagggcgccgccgcgccgccggccgtcaccgtcaagatgcggccgccgaggccgccggtggtgatgcacaggagggtgatcgacgcgccgccggctgcgaagacgtcctacattggtgctgtggccaagtggttcacatcgatcgtttcacggtataagaaaacaccccgcaccaagtacccaattggtcagtgtggcaacaacgtcggcttgctgctgctgctcgacaaggctcccaggccagggcacggccaccagaagatgcccaagaaaatttag</cdnaseq>

Protein Sequence

<aaseq>MADSGEPPPPLCPLCGHPAASYTSSSSSSPSPSQPTARPPLKRK APPEAPPAVVRVEIGDEAAALREALARQHGALADLQAELDAERGAAAGAASEAMTMIL RLQREKAEAMMEARQFRRYAEEKMSHDAAELAALEDLLAKRDAALRALQSSSSSRGGG GGRGVGGGSGRATPSFPGSSPHHYPSTPTPASAAAAANYPPLRCFIDHPPTASEADAL DAQTPREHLTRLAHRVHMLERGVHPMATTTTTTPIIRVAPGSAFPRPTRAYSDADSLE FCDGEYFPDDVDCGASDRVYTVDAIHGRPLAVPEGSCTPGGSSCCGGGGVPWAEDEEM RRLSARLQALEADRETMRQAIVSMGAEKAQVVLLKEIAQQLCKEATPPLPPSAVTVGH HLYKGAAAPPAVTVKMRPPRPPVVMHRRVIDAPPAAKTSYIGAVAKWFTSIVSRYKKT PRTKYPIGQCGNNVGLLLLLDKAPRPGHGHQKMPKKI</aaseq>

Gene Sequence

<dnaseqindica>1..1314#2021..2067#2178..2280#atggccgactccggcgagccccctccccctctctgccccctctgcggccaccccgccgcctcctacacctcctcctcgtcatcctcgccctcgccgtcccagccgacggcgaggccgccgctgaagaggaaggcgccccccgaggcgccgcccgcggtggtgcgggtggagatcggcgacgaggccgcggcgctgcgcgaggccctggcgcggcagcacggcgcgctcgcggacctccaggcggagctcgacgcggagcgcggcgcggccgcgggcgccgccagcgaggccatgaccatgatcctcaggctgcagcgggagaaggccgaggcgatgatggaggcgaggcagttcaggcggtacgccgaggagaagatgtcgcacgacgccgccgagctcgccgcgctcgaggacctcctcgccaagcgcgacgccgccctccgcgcgctccagtcgtcgtcctcctcccgcggcggtggcggtggccgcggcgtcggcggcggcagcggccgcgccaccccgtcgttcccgggctcctcgccgcaccactacccgtccacgccgacgccggcctccgccgcggcggccgcgaactacccgccgctgcggtgcttcatcgaccacccgccgacggcgtccgaggcggacgcgctcgacgcgcagaccccgcgcgagcacctcacccgcctcgcccaccgcgtccacatgctcgagcggggcgtccacccgatggcgaccaccaccaccaccaccccgatcatccgcgtcgcgcctggctccgccttcccgcgccccacgcgcgcctactccgacgccgacagcctcgaattctgcgacggcgagtacttccccgacgacgtcgactgcggcgccagcgaccgcgtctacaccgtcgacgccatccacggccgcccactggccgtccccgagggctcgtgcacgccgggcgggagctcatgctgcggcggcggcggcgtgccgtgggcggaggacgaggagatgcgccgcctcagcgcgcgcctccaggcgctggaggccgacagggagaccatgcgccaggccatcgtctccatgggcgccgagaaggcgcaggtcgtgctgctcaaggagatcgcgcagcagctctgcaaggaggccacgccgccgctgccgccgtctgcggtgaccgtcggccaccacctctacaagggcgccgccgcgccgccggccgtcaccgtcaagatgcggccgccgaggccgccggtggtgatgcacaggagggtgatcgacgcgccgccggctgcgaagacgtcctacattggtgctgtggccaaggtaattaatggatcaagatttcttagccacattgttaaccatgttaaattaattgaggtttgggagaagctaactaactattgcattgtgccattagccataacaatgttctaaatgttaagaaaattagcacagtaagcagcaatattttcctggatcaggaagttcagaagtacagatgatcaagatttctattcaatttgttgagcattttaattgattgaaaggttggaaaaaacaagctaactattgcattatgcatttagccattacaatgttccactgtactatatatttagcaaatgagcatgataagcagaaacactttcctgaatcagaagttcagaatagtttgtcaaagagaacgagaacaagagttgttttggttaaattagtcaggtcattcttcaacactagccttacaatgcatgatttgttctaattttctatcgagagtactgatcgtaaaacctgatttaacatttgtatagttgtatctgatcagtaaatactgatcatacgcaagcttcattttcttcatgatcactgttgaatctgattatgtatcaccaataccaagttctccatgattgcaccttcagtttgtgccaaatgccaatactactactgcatctgcattctgcattctgcattgacacaacctaatgtcctaatctgctcttgctcttttctatttcccttccagtggttcacatcgatcgtttcacggtataagaaaacaccccgcaccaagtgagttcatccccatcatcttatctccgtaaaattcctgcgttccaaaggagacctacatttctatcgcgcattcctccttttcatatattttttttcgccttttgcaggtacccaattggtcagtgtggcaacaacgtcggcttgctgctgctgctcgacaaggctcccaggccagggcacggccaccagaagatgcccaagaaaatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0488700, RefSeq:Os12g0488700