BGIOSGA013361

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Revision as of 10:00, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013361| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013361, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013361

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013361, complete gene.

LocusTag

OSJNBA0022C08.9

Ensembl Transcript ID

BGIOSGA013361-TA

Ensembl Protein ID

BGIOSGA013361-PA

Length

6352

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31576246..31582597

Sequence Coding Region

31576246..31576680,31576878..31577336,31580405..31581971,31582194..31582597

Genome Context

<gbrowseImage1> name=IndicaChromosome03:31576246..31582597 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:31576246..31582597 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGCTGGAAGCATTCGCGGCCAAGCTGGCGAACGTCCTGGTGGGGATGGCGAAGGAGGAGGTGGAGACGCTCCTGGGCGTGCCCGGCGCGATCGCCAAGCTCGAGACGACGCTCGCCGACCTGAGCAGCATCCTGGCCGACGCCGACCGGAGGCGCATCCACGACCCGGGCGTGGAGCGGTGGGTGAGGGAGCTCAAGGACGCCATGTACGACGCCGACGACATCCTTGACCTCTTCCGCGCCATGGAGGGCGGAGAAGACCCCGGCTCACCGCCAAGAGCTGCTCCGGCGCCGTCGGCGTGCTGGAGCGCCCTCTGCCGCCGCAGCCCTGCCGCTACGCGCAAGATCGGGAGGAAGATCCAGGAGCTCAACCGGAGGGTGGAGGAGATCGCGAAGAGGAGCTCCCGCTTTGGATTTGTCTCCCAAATCGTCAGGCGATGTCATCGCCGTCGCTATCACCGGCGCTGGGGGATAGGCAAGACCACGCTTGCCAGGATGGTCTTCAACGACGCCGTGTTGGAGAGCCACTTCGACAAGAAGGTATGGCTGAGCGTGAATCAGGAGGTCAACGAGGTTCACCTCCTGCACGGCGTGATCGCCGCGTTTGGGGGAAGCTACCATGGCTGCGCCGGGGACAAGGCCCTGCTCGAGGACACGTTGAAGCATGCCGTGAGGCAGAAGAGGTTCCTGCTGGTGATGGATGACGTGTGGAGCGATAGGGTGTGGAGCGATCTGCTCCGAGCACCGCTCGGTGCTTGTGCTCCTGGAAGCCGAGTGTTGGTGACGACGAGGAACGACGGAGTTGCTCGTGGGATGAGAGCCCAGCACCTCCACCGGGTTGAGAAGCTGGATCTAGGTGATTCTTGGTCACTGCTAAAGAAGCAGGTAGTTCTGAACGAGGGCGATGAATCTGAGATTGATGGACTAGAGGACATCGGATTGAAGATCGTAGAAAGATGTGATGGCTTGCCACTTGCGATTAAGGTTGTGGGTGGACTCTTACTGAACAAGGGCAAAACGAGAGATGCTTGGGTGAACGTCTCTAATCACTTTGCATGGTCAATGACAAGAAGCAATGACGACATCAACAAAGCGGTCTATCTGAGCTACGAAGAGCTGCCTCCGCATTTGAAACAGTGCTTCGTGTTCTGCTCACTTTTCCCTAAAGATGAACTGATCATAAGAGGAGTAATAGTCAGGATGTGGATTGCACAAGGTTACGGACATGACATAATGAGATCGACGCTACCTGAAGATTTGGGAGTTGAATATTACAATGAGTTGGTGTCACGGAATCTTCTAGAGCCATACAAACGATCCTATGATCTATCAGCAAGCACAATGCATGATGTTATTCGCTCCTTTGCTCAACAGATAGTTAAAGATGAAGGACTACTTGTCAATGACAGACAAGATGTGCATGGTATTGCAGGTGCTTCAAAGCTGCGTCACTTGTCTGTATCCAAAACTGCAATAGAGCGGGTCGCTATACAAAAGCAAGTGTCATTGAGGACATTGTTGCTCTTTGGGAGATGTATAACTGAGTTGACGTATTTCAGGAACAATATCTCTTGCCTAAGAGTACTACATTTACAAGGTGTAGATCTTGTTGACCTGCCGGACTATATATGCCATCTCAAGCATCTAAGATACTTGGGGCTTGCAAATACAGGCATATCTGCAATCCCTCGAGGCATAGGAAATCTAAAATTTCTACAGTTCATTGACCTTATGGGGTGTCGGAATTTTCATCAGCTTCCTGACAGCATCTTGAAGCTACAGAATATGAGGTTTCTCGACTTCAGGGGCACGAGGTTAACCTCAATTCCTCCAGGTATGGGAAAGCTAGAAAACTTGGTGAACATGTTGGGGTTCCCAACTTATTTGGATGACAGGGGACATGCCTGGAGCAGCTTGGAAGAACTACGGTCTTTGTCGAACCTAAAATGGCTTGATTTAAGAGGTCTAGAGCTTGCATCTTCAGGCTCTATGGCTGCTACAGCAATGCTCAACAGTAAAAAGCACTTGAAAATCTTAGACTTGACATTTGCCAGTAGGCTCACCGACAACGGGATGATCGAAGGAACCAGCAATGTAATCGAGGAGCAGGAACGAGCCGAGGTTGTGTTGAGTAATCTCTGTCCTCCGCCTTGCGTAGAATGTCTTACGGTCAATGGTTACTTTGGATATCGACTACCCCGATGGATGAGAACAATGTCGGACTTTCCAAGCTTAAGGCGTTTGGAGCTGAAGGACTACGTATGCTGCAAGCAGCTGCCTGTCGGCTTGGGCCAGCTCCCTTTTCTTGATTATATTTGGATTGATCATGCTCCATCCATCGTGAGCATTGGCCATGATCTCCTCTTCCTCTCCTCCTCTAGTGCTGATGACCAGAAAGTCACAACTGGAACAAGGATCACTAGGAAGCTGCAGCTCCATGGTCTTTCTCGCGAGAACTTCCCGTCACTTGTGGAGCTCACGTCAGCTGACAACCCGAAGCTGCAGAGGATCTCCAACAGTCCAAGACTGCGACATATCGTCGTTATCAGATGCCCAGGGCTGAAGGTAGTGAAGGATTTGCAATCACTTAGGAGCGTCATTTGGAAGGATTTGGATGCTGATGCCCTCCCAGAGTACCTACGAGAGACAGAGCTAAATAAGCTGGACGTGTACTGCAGTCTAAGATTGCTTAAACTCATATCCTTGCAAGATGGCAGCTATGAGTGGGAAAAGATCCAGCACGTCCAGCTACTGAAGGCATATGGGAAGAGATCAACGGAGGATAAGGTTGACCGGCACATCTTCTACACTAAGGATCCGTACTCGTTTGAAGCAGATATGGGCGAAGATCTATGA</cdnaseq>

Protein Sequence

<aaseq>MAAALEAFAAKLANVLVGMAKEEVETLLGVPGAIAKLETTLADLSSILADADRRRIHDPGVERWVRELKDAMYDADDILDLFRAMEGGEDPGSPPRAAPAPSACWSALCRRSPAATRKIGRKIQELNRRVEEIAKRSSRFGFVSQIVRRCHRRRYHRRWGIGKTTLARMVFNDAVLESHFDKKVWLSVNQEVNEVHLLHGVIAAFGGSYHGCAGDKALLEDTLKHAVRQKRFLLVMDDVWSDRVWSDLLRAPLGACAPGSRVLVTTRNDGVARGMRAQHLHRVEKLDLGDSWSLLKKQVVLNEGDESEIDGLEDIGLKIVERCDGLPLAIKVVGGLLLNKGKTRDAWVNVSNHFAWSMTRSNDDINKAVYLSYEELPPHLKQCFVFCSLFPKDELIIRGVIVRMWIAQGYGHDIMRSTLPEDLGVEYYNELVSRNLLEPYKRSYDLSASTMHDVIRSFAQQIVKDEGLLVNDRQDVHGIAGASKLRHLSVSKTAIERVAIQKQVSLRTLLLFGRCITELTYFRNNISCLRVLHLQGVDLVDLPDYICHLKHLRYLGLANTGISAIPRGIGNLKFLQFIDLMGCRNFHQLPDSILKLQNMRFLDFRGTRLTSIPPGMGKLENLVNMLGFPTYLDDRGHAWSSLEELRSLSNLKWLDLRGLELASSGSMAATAMLNSKKHLKILDLTFASRLTDNGMIEGTSNVIEEQERAEVVLSNLCPPPCVECLTVNGYFGYRLPRWMRTMSDFPSLRRLELKDYVCCKQLPVGLGQLPFLDYIWIDHAPSIVSIGHDLLFLSSSSADDQKVTTGTRITRKLQLHGLSRENFPSLVELTSADNPKLQRISNSPRLRHIVVIRCPGLKVVKDLQSLRSVIWKDLDADALPEYLRETELNKLDVYCSLRLLKLISLQDGSYEWEKIQHVQLLKAYGKRSTEDKVDRHIFYTKDPYSFEADMGEDL</aaseq>

Gene Sequence

<dnaseqindica>1..435#633..1091#4160..5726#5949..6352#ATGGCGGCGGCGCTGGAAGCATTCGCGGCCAAGCTGGCGAACGTCCTGGTGGGGATGGCGAAGGAGGAGGTGGAGACGCTCCTGGGCGTGCCCGGCGCGATCGCCAAGCTCGAGACGACGCTCGCCGACCTGAGCAGCATCCTGGCCGACGCCGACCGGAGGCGCATCCACGACCCGGGCGTGGAGCGGTGGGTGAGGGAGCTCAAGGACGCCATGTACGACGCCGACGACATCCTTGACCTCTTCCGCGCCATGGAGGGCGGAGAAGACCCCGGCTCACCGCCAAGAGCTGCTCCGGCGCCGTCGGCGTGCTGGAGCGCCCTCTGCCGCCGCAGCCCTGCCGCTACGCGCAAGATCGGGAGGAAGATCCAGGAGCTCAACCGGAGGGTGGAGGAGATCGCGAAGAGGAGCTCCCGCTTTGGATTTGTCTCCCAAGTAATCCACTCCTCCTCGGCCCTTCGTCTAACCGATAGACCCATGTGTTCTTGCTCGTCAGAAAGCAGCCGCAACCGCAAGACGGGACCATCCATCATTCGATCCGATGTTGTCGGCGACAAGATAGATCTTCACACAAGGAACCTCGTTGATCTGCTGATTGGCAACAAGCTGGCGGATGGTCGCACGCGCGCAAGATCGTCAGGCGATGTCATCGCCGTCGCTATCACCGGCGCTGGGGGATAGGCAAGACCACGCTTGCCAGGATGGTCTTCAACGACGCCGTGTTGGAGAGCCACTTCGACAAGAAGGTATGGCTGAGCGTGAATCAGGAGGTCAACGAGGTTCACCTCCTGCACGGCGTGATCGCCGCGTTTGGGGGAAGCTACCATGGCTGCGCCGGGGACAAGGCCCTGCTCGAGGACACGTTGAAGCATGCCGTGAGGCAGAAGAGGTTCCTGCTGGTGATGGATGACGTGTGGAGCGATAGGGTGTGGAGCGATCTGCTCCGAGCACCGCTCGGTGCTTGTGCTCCTGGAAGCCGAGTGTTGGTGACGACGAGGAACGACGGAGTTGCTCGTGGGATGAGAGCCCAGCACCTCCACCGGGTTGAGAAGCTGGATCTAGGTGATTCTTGGTCACTGCTAAAGAAGCAGGTAAGACTATCACATAGTATCTATCTATCTATTATCTATCTATCTATTATCTATTATTAAGACAGCTCGAAAAGAAGGCACCACGTTCGCTGTGGAGGCTAGAAATTTCCACATTAATCGGAGAAAAAGAAAAAAAAGAAAAAGAGAGTCCAACTAGAAATACAATCTAAAAAAGAGCTGAAATTCGAAATTAAAAATAAGCAATATTGACAGAAATTTCTATATAAGAACCCAATACGAGATTAATTAAAATTCGAAATAAAAATAAAATAAAATTCAAAATTAGAAAAAGAAAAGGTGAGTCCATGTAGGAATACAATCTAAAAAAAGCTGAAATTCGGAATTAAAAATAAGCAATATTGAAAGAATTTTTCATATAAGAACCCAATTCGAGATTAATCAAAATTCGAAATAAAAATAAAATAAAATTCAAAATTAGAAAAGAAAAGGAGAATCCAAGTAGGAATACAATTTAAAAACAGCTGAAATTCGAAATTAAAAATAAGGAATATTAAAAGAAGAATCCATATAAGAATCCAATACGAGATTAATTAAAATTCGGAATAAAAATAAAAATAAATCCAAAATTAGCAAAAGAAAATAAAAGAAGAGTTCAAGTAGGAATACAATTTAAAATTAGCTGGAATTAGGAATTGAAAATAAGCAATATTAAAAGAAGAATCCATATAAGAACCCAATACGAGATTAATTAAAATTTAGAATAAAAAATAAAATAATAACCAAAATTAGAAAAATTAAAAGAGAGTTCAAGTAGGAATACAATTATAAAACAACGAAAATTGAAAATAAAAAAATAAAAACATTAAAAGAACACAATACAGTATTAGCTAATTTTTTATGAAATAAATTCTGGAATTAGAAAAAGAAAAATAAAATTTCAATTAGGAATACAATTTTTAAATAACTAAAATTTGTGATAAAAATAAAGACTATTAAAATAAAAGACCATCTAAAACACATGACGAAATAAATTAAGTAACATGCCTATAAAGAAGTAGAGTGGTGGTGGTTGATACGACATATAAAAATTGTTAATAAAACATCAAATAAAATCCTAATGACGATTAAAAGGAGGGACGTCAGGCAGACCGTGAAGCAAACAAGTAAGGTGGTGGCCAGGACTTCTAGAAAGTAAAAAAAACATTTATAATCATTTCGATTTTTAAAATCTCAATGACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGCAGAGCCGCCGACGGTTGATGGGACTTCTAGAAAATAAAAAATGAATTCCAATGATAGTTATGTTCAATTTTTAGAATCACAATGACAATAAAGAGTATGCGGCGGACGGGCTGTAAAGGGGCATAGTGGCCTCGTTTGATGGGACTTCTAAAAATTATAAAAAATAAAACAACAAGTTCATTTTTTAAAGGTTCGGAATTTCTAAAAGAGTACAAAAAAAAAACAATGCATAATCAGGTTCGATTTTAAAATCTCAATGACAATAAAGAAAGGAGATAGCGGACGAGCCATAGAGGAGTACAATGGCAAAGCTACTGACGGTTTGGCGGGACTTCTAAAAAGTAAAAATGAACCCAAACGATAATTATGTTCAATTTTTAAAATCTCAATGACAATAAAGAGAAGAGACAGTGGACGGGCCGTACAGGAGTGTAATGGCAACGTTTGACGGGACATCTAGAAATTATAAAAATGAAACTCAACGTGACAATAAACTCTAAAAACTACAAAATCCAATTTTTAAATGTTCCAAGAAGAATGGATAGAAATAGTGGTAGATCGAGCAAGCAAATAAAGAAAGAGATAGCATAAGAGGTAGCAACTGGTGTGACTTTTCAAAACTATATAATTAGAAACACGAGGATGATAAGTTTTGGTCTTTCAAAGTCTTAATACAATGAGATAGCTATTAAATAAATTTTAAGTAAAATCATATTTAAAAAATATATGATTTTGTTTGGGTGCTAGCCGCGCAATTGCGCGGGCTACCCAGCTAGTTAATTACTAATTAGTACTGAGATGCACATTACTAATTACTCCCTCCATCTAATTTTAATAGTCATATTTTATTTTGGCATACTGACCAAGGATAAGTAATTCTACTTATCATCCATTTAAACATGTTATTTCTCGTTAACAAGCGATTCATTAATATTTACATTTCTCGATGCCCATGCAGCCAATCTTGTGTGGAAGAATGAAGAGTCACGCATTAAATCTGAGAAAATCATTAAGATGATAGGTTGTTGGATTGAAATATGCCTATTAAAAATAAATTTTTCAGATTTGGAAATATGACTATCAAAACTAGATGGAGGGAGTACTAATTATTACTCCCTCCATCCCATAATATAAGGGATTTTGAGTTTTTCCTTGCAACGTTTGACCACTCGTCTTATTCAATTTTTTTTGAAATTATTAATTATTTTATTTGTGACTTACTTTATTATCTACAGTACTTTAAGCATAACTTTTCGTTTTTTATATTTGCAAAAAAAAATTTGAATAAGACGAGTGGTCAAATGTTACAAGTAAAAACTAAAATTCCCTTATATTGTGGGACGGAGGGAGTATTAGTACTGGGAATAATTGAATATAGAATAGAAATGTGTATCTCTGTACTACTCCGTCCCAAAATATAAGAACACCGAATAGGACAATTTCTAGGATTACGAATCTGGATATTTCCTAGTACTATGAATCTGGACATATAGCCTGTCTAGATTCGTAGTACTAGGAAATGTCCTATCCGGTGTTCTTATTGGGACGGAGGAAGTACTAATTAGTGAGATGCACATTACTATTCTATATTCAATTATTCACAGCAGCACATACATGCGTTGGTGGATGGTATTTCTCTTGCTCCTACAAAATGTGAGGCTGTTACTAGTATTTCTGCTCAGAGGAAAACAAGTGTTTTTAGCACAAATTAAGCCGTTGAAACCAACGGAAAACAACTTGATGCAATATATTTTACTAGTACTAGGTTTTTTCTCCCTAGTTTTGTTCCTCTCTTGCTCTCTGATGTGGCAATTCTCCAACAGGTAGTTCTGAACGAGGGCGATGAATCTGAGATTGATGGACTAGAGGACATCGGATTGAAGATCGTAGAAAGATGTGATGGCTTGCCACTTGCGATTAAGGTTGTGGGTGGACTCTTACTGAACAAGGGCAAAACGAGAGATGCTTGGGTGAACGTCTCTAATCACTTTGCATGGTCAATGACAAGAAGCAATGACGACATCAACAAAGCGGTCTATCTGAGCTACGAAGAGCTGCCTCCGCATTTGAAACAGTGCTTCGTGTTCTGCTCACTTTTCCCTAAAGATGAACTGATCATAAGAGGAGTAATAGTCAGGATGTGGATTGCACAAGGTTACGGACATGACATAATGAGATCGACGCTACCTGAAGATTTGGGAGTTGAATATTACAATGAGTTGGTGTCACGGAATCTTCTAGAGCCATACAAACGATCCTATGATCTATCAGCAAGCACAATGCATGATGTTATTCGCTCCTTTGCTCAACAGATAGTTAAAGATGAAGGACTACTTGTCAATGACAGACAAGATGTGCATGGTATTGCAGGTGCTTCAAAGCTGCGTCACTTGTCTGTATCCAAAACTGCAATAGAGCGGGTCGCTATACAAAAGCAAGTGTCATTGAGGACATTGTTGCTCTTTGGGAGATGTATAACTGAGTTGACGTATTTCAGGAACAATATCTCTTGCCTAAGAGTACTACATTTACAAGGTGTAGATCTTGTTGACCTGCCGGACTATATATGCCATCTCAAGCATCTAAGATACTTGGGGCTTGCAAATACAGGCATATCTGCAATCCCTCGAGGCATAGGAAATCTAAAATTTCTACAGTTCATTGACCTTATGGGGTGTCGGAATTTTCATCAGCTTCCTGACAGCATCTTGAAGCTACAGAATATGAGGTTTCTCGACTTCAGGGGCACGAGGTTAACCTCAATTCCTCCAGGTATGGGAAAGCTAGAAAACTTGGTGAACATGTTGGGGTTCCCAACTTATTTGGATGACAGGGGACATGCCTGGAGCAGCTTGGAAGAACTACGGTCTTTGTCGAACCTAAAATGGCTTGATTTAAGAGGTCTAGAGCTTGCATCTTCAGGCTCTATGGCTGCTACAGCAATGCTCAACAGTAAAAAGCACTTGAAAATCTTAGACTTGACATTTGCCAGTAGGCTCACCGACAACGGGATGATCGAAGGAACCAGCAATGTAATCGAGGAGCAGGAACGAGCCGAGGTTGTGTTGAGTAATCTCTGTCCTCCGCCTTGCGTAGAATGTCTTACGGTCAATGGTTACTTTGGATATCGACTACCCCGATGGATGAGAACAATGTCGGACTTTCCAAGCTTAAGGCGTTTGGAGCTGAAGGACTACGTATGCTGCAAGCAGCTGCCTGTCGGCTTGGGCCAGCTCCCTTTTCTTGATTATATTTGGATTGATCATGCTCCATCCATCGTGAGCATTGGCCATGATCTCCTCTTCCTCTCCTCCTCTAGTGCTGATGACCAGAAAGTCACAACTGGAACAAGGATCACTAGGAAGCTGCAGCTCCATGGTCTTTCTCGCGGTGATGCTGGTGTTGCATTTCCAAAGCTAGAAACACTGGGTTTAAAGGGGATGTTGGGATGGAGAGTGTAGAACTGGGATCAGCAAACACCAGGGATGCCCGCCTTAGACGTTGTTACCATCACCGGTTGTAAACTACGTTATCTTCCGCTTGGACTTGTGCACCATGCAACCGCACTAAGGGTGCTGAATCTCAGAAATGCGCCGCACCTGATCTCCGTAGAGAACTTCCCGTCACTTGTGGAGCTCACGTCAGCTGACAACCCGAAGCTGCAGAGGATCTCCAACAGTCCAAGACTGCGACATATCGTCGTTATCAGATGCCCAGGGCTGAAGGTAGTGAAGGATTTGCAATCACTTAGGAGCGTCATTTGGAAGGATTTGGATGCTGATGCCCTCCCAGAGTACCTACGAGAGACAGAGCTAAATAAGCTGGACGTGTACTGCAGTCTAAGATTGCTTAAACTCATATCCTTGCAAGATGGCAGCTATGAGTGGGAAAAGATCCAGCACGTCCAGCTACTGAAGGCATATGGGAAGAGATCAACGGAGGATAAGGTTGACCGGCACATCTTCTACACTAAGGATCCGTACTCGTTTGAAGCAGATATGGGCGAAGATCTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013361