BGIOSGA013374

From RiceWiki
Revision as of 10:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013374| Description = BGIOSGA013374| Definition = Oryza sativa Indica Group BGIOSGA013374, complete gene.| tag = | tid = BGIOSGA013374-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013374

Description

BGIOSGA013374

Definition

Oryza sativa Indica Group BGIOSGA013374, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA013374-TA

Ensembl Protein ID

BGIOSGA013374-PA

Length

4702

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31895001..31899702

Sequence Coding Region

31895001..31895149,31895233..31895371,31899358..31899702

Genome Context

<gbrowseImage1> name=IndicaChromosome03:31895001..31899702 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:31895001..31899702 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTCGTACAGGAGCTCATGGACAGGGACCCCTTGCTGGTGTTTGGCGAGGGCGAGTACGGCGTGACGGACATGTTCTACGCCGCCGCGAGGGGCGGGAACGCCGAGGTGTTCAAGCTGCTGCTGGACCACGCCATGTCGCCGAGGGCAATCCATGCCGCTGCGAGGGGCGGCAACGTGGAGATGCTGAGGGAGCTCATCGAGCGTCGCTCCGACGTGTCGGAGTATCTCAACTTCCGTGGATCCACCGTGCTGCATGCTGTTGCAGGTAGAGGGCAGCTAGAGGGGTACAGATATCCAAAATACAGCCCTCGCTGTTACTATTTGGCACATTGGGAGGCGAGGAACAATGCAAAGAATAACAATGAATCCATTCACCCAAAGCGTGTTGCCCAGAAAATTTTTGCTTATGTCGACATGATTGTTCAACATTGCTACAAAGCACAGGCTGCTCCCAGGGGTGATTCCTCTCCTTCAATTCCACGATGGACTCCCCCACCAGTAGGTACTGTGATGATCAATTGTGACGCTGCTCTGTTTCAATCTTCTNGTCAAATGGCATTGGGTTCCTCATACGCGACCATGATGGAAGATGTCTACTGGCTCTCAATGAACGAGTCCAGAATGTAA</cdnaseq>

Protein Sequence

<aaseq>MAFVQELMDRDPLLVFGEGEYGVTDMFYAAARGGNAEVFKLLLDHAMSPRAIHAAARGGNVEMLRELIERRSDVSEYLNFRGSTVLHAVAGRGQLEGYRYPKYSPRCYYLAHWEARNNAKNNNESIHPKRVAQKIFAYVDMIVQHCYKAQAAPRGDSSPSIPRWTPPPVGTVMINCDAALFQSSXQMALGSSYATMMEDVYWLSMNESRM</aaseq>

Gene Sequence

<dnaseqindica>1..149#233..371#4358..4702#ATGGCGTTCGTACAGGAGCTCATGGACAGGGACCCCTTGCTGGTGTTTGGCGAGGGCGAGTACGGCGTGACGGACATGTTCTACGCCGCCGCGAGGGGCGGGAACGCCGAGGTGTTCAAGCTGCTGCTGGACCACGCCATGTCGCCGAGGTGCTCGACGAATTGTCCCAACGGGGAAGGCGCAACAGCGGTGGTGGCTGCTCCTCGGTGTTCTGGCTGGAAATGATGAGTAGGGCAATCCATGCCGCTGCGAGGGGCGGCAACGTGGAGATGCTGAGGGAGCTCATCGAGCGTCGCTCCGACGTGTCGGAGTATCTCAACTTCCGTGGATCCACCGTGCTGCATGCTGTTGCAGGTAGAGGGCAGCTAGAGGTGAGGCATCTACTTCTTGGCCATTGCTTACTTCTGTAAAATGCTTGATACAGTAAAATTTTTCTTTGTGCCAATATGGATGACAAAGGTAGATCCTCATTTCATCAGAATGTTTGGGTGAAATATTTCCATACCCGATATCTTTTGACGTTATGAAACCCATTTTGCCTTTAGATGCGCTGCAGGTTATTATCTGGTAATCGATTTCAACATAAATATTAAAGTTGCTCTTGATCATGAGAAAATAGATATATTAAGGATCAACATAAATATTAAAAAGTTGCTCTTGATCATGAGAAAATAGATATATTAAGGAACAAATTATTTTCATTCGTCCTTTCTGAACAAATGGTTTGAGCTTGGAAGGATATTGTTCAGCTAGAATGCTGCGTGTTACCAAAGTAGACATTGAGATATGTAGATAGTTGTAATTAAAGAACATTTTTTTATCTTATATAATAAGCATACCACGCCCAGATGATAAAGGCTCATTTAGTTAATATCGTCATGCTCAACTCTCCAGTGTATTATGAAGCCAAAGAATAAATATAAAGACCATACTGATTTGGCCTCTTTCACATGGACTTCAAGTTGTGCAATTCATGACCGGATTTTCTTTGTAATTTTAGTTAGAAGCAACCCAGCGCTTCCGACTGAGATGGTTGTGCGACGACTGGTAGCGCCCAGCGGTTGAGTTCCTACTGGACAACTGTGGGCGAAGCGGCAAAATGGCTCACGAAGGCCAGCGGCGGCTGGAGATTGACGATGAAGAAGCGGTCAGTGGAATTTCTCCTCCATAGCCACTTAGCCTCTCCTTTCAAGATAACTCTGTATGCTTGATGCCCCTCTAATAATAGCTTAGGATTTTTTGAGACATCGATAGCTGCAATCAGTGCTCATGTCATCATTCAATGACCTATAACAATTTCGAAAAACTATGTTGGGCACCATATGAACCCAGGCAGATGTTCTTTGGATCGGTTTTTGTACACCACAAGGTTCTATCTGCAGGAAATTTAACAAAAAATAAATTGGCCAACTATATTCGCTATGCAATGGAGTTTATGGTGAAAGCTCAGTTGCTTTTTGTTCCATGTATTATCCTTGAATTGTAGTCTGAAACCAACTTCCTAATATAATGGGCAGAGCTCCAACCTTCAGAAAAAGAGAAAAAGTCACCTTCTCCTAACTTACCTACTGTGTTGTTTTTTCCATTCACATGCGTTTGCAGCTTGGCAACTAGAGGAGGAGCTGACTTCTAGATTGATCTGCTCTCTTATTTTCCAGCAATGAGCATCTGTTACAGGCAATGAGCTTGTACAGCAAAAAAGGCTCAAATATGAAACCATCTGTTACAGCTTATATGTGTTTGCATTGAATTAGCAAGTACAACAAAGAAGGCTCAAAATTCCCTTTTGTTATTGTTAATACTTCATGAGCTTATGAAACTATTTTAGTAAAATTCAATTCTCTCAATTCCTTGGCGATTGCACCAAAAACGCAAGTTCCATTTGGATTCCCTTTTTATCAATGATAACCGTAGCACTGTCATCATAGCGTATTATTATACTGTCTTCGCATTTGAACTCAGTAGTTCCTCATTAAAAATTAGACTCTATAGATATGGTAATATGGAGAATACAAAGTGGTTTGAAGCATGCACAGAACCGGAAGCGCCCCTTGTTTTAAAGAGATGATGAGTTATTCATATTTAATTTGATGGTCAGAAGACAATCTGTAGTCGTGCCACCATCCCTCCTGCCGATCTCCAGCAACGTGCGGCTGCCTAAAGCGCCACTGCCGCCGTCTGTCCAAATTACACTAACGTTGTCTCTTTGTCGTCGAAAGGTCCTGTGTGCACGCTTCCTAAACTATTAGATGGGGCATTTTTTTAATATATATATATATATGTATATATATATATAATCCATTTTAAAGTCTTTTTTAGCTAATTGTGTTAATTCATCGTTCCATTTTACATGTGAAGGGAGGGATTTCTTTCTAGAGAACACAGCTCCACAGCCTGATTATACCGGGGAAAAAATTGAAGTCGGACAGATACAGAGGTAAATATTAGCAGGGAGGGGAAAAATGTAGAAAGGTGAGCCGATACGGTGAACATATCATATAAATTTTTTTCCTAACATGAAATTTTAAAAGTTATTAAAAACAATGGAATTGCACCGTAGCGTTTAGCACGGGCATATTACTAGTTTCCATTGATGGAAATATTAGCAATTCTCTAAAATTCACAAATATACAACGTTAACCATAGAAAGATAATGTAAGCCATTGGCATATTACATTTAATATATTCCCTCTGTCCTCTAATATAAGGAATTTTGATATTTTGCATGCACTGTTTGATCATTCGTCTTATTAAAAAAATTGGAATTATTATTTATTTTATTTGTGATTTACTTTATTACCCAAAGTACTTTAAGCACAACTTTTCGTTTTTTTATATTTGCACAATTTTTTTTTAATAAGACGAGTGGTCAAACAGTGTAAGCAAAATGTCAAAATCCTTTATATTAGAGGACGGAGGGAGTAACAAAGATACGGTTAGGTCCGTGTCACCCACCACACAACGCCGCTTCGCCATCGCCAGTGACACCACCTCTAGCGGCGGGCATCCCGCTACCTCCCTATTCCTCCCACCACTTTATGTCCCTCTTTCCTTTCCTTCCCTCTCGCCCCTTTAGATCTAGATCTAAATAAACTCTAAAGCTTCATTATCACCTTCGCCGCCGCCCCTAAAGGCGGCCATAGCCACCACCCATGTAGCTCCTCCCCTCTCCTCCCTACGCTCAGCCATGGGTAGAATGAGCCGCCAGTGAAAAAGCCGAACCGGGGACTGACCTGGTGAGTTCGTAGGTTACCGGTCAGACAGCCGGTTCATGGCTAATTATTCTTTTAAGTCATAATTTACTTTAAATTGCTAAATAGAATAGGTATTCTATTCTCACCAACAAATATCTCTTGCACAGTTGGTTAGGTCAGAAAGTACAATGCATGCAGCGCCACAGGCATGAGGTCTGGGGTTTGACTCCCCTTCTGCTCAACCTAAAATTTATATTTTTCCATGCAGGGTCCAACCGCTCCGGTTTTAAGCCGGTTCAACAGAAAACCGGCCGGTTCAGCAGATTTATACTGGTTTATATACATTGACAGTCTTTTCTGCAAACAGAACCGTGGCACTGGTTCCGGTTTTTTCTGGTTGAACCGCCGGGCCGGTCCGGTTTTTTTCTATGCCTCAAATGCTCAGGATGACGGTGGCAGCGACATATGATGGACAACAGCACTACCAACCCCTCCTGAGAGTGCCTATGGAAGAGGATTACCATCTGGTTGGCAAGATAACCAGAAGGTCTGGAAATCGCTATGGAAGATTGTGGCTCCGGGGAAAATGAAGATCAACCTTTGGCGAGCGGTACATGACTGGCTCCCTACCGGTTTCCAACTAAGAAAGCGCCATATCAAAGCTCTTGATGGATGCTTTTTCTGTGGTAGGGATGATCAAGTGGAGCATATCTTTATCCAATGCCACTTTGCTGTTGCTGTCTGGCAGGATGTTAAAGAGAAGTATGGAATGAAACTCTGCAGGAGAGAGCTGGGGAATATGAGGCAATTTTTTTTGAACGCCTCGCACAAGACGGTGCGAAGTTCTATTGATAGAGCAGGAAAGAATTACAAGATTATAACCCTGAAGGGTCATAACCAGGAAAAAAGAAAAAATATACCACCCCCACACACCGACAGCACCAACATACACGACCAGGAGGAGGCTAGCACCGGACCGGCCGCCGCTAAGCGTGACCGGCCGCCGCTAAATCAACAAAAGAACACAGACGAGATCGCCCTACAGCTAGGAGGTGCCAAAACGACGTCTTCAAGAAGAAAAACGACGAGCCCTTCTTCAAGTCCTTTCAGTGGTCGTGGTGCAAAATGAATATGAGGCAATGGATCTTTGATTTTTTGAACAGGGGTACAGATATCCAAAATACAGCCCTCGCTGTTACTATTTGGCACATTGGGAGGCGAGGAACAATGCAAAGAATAACAATGAATCCATTCACCCAAAGCGTGTTGCCCAGAAAATTTTTGCTTATGTCGACATGATTGTTCAACATTGCTACAAAGCACAGGCTGCTCCCAGGGGTGATTCCTCTCCTTCAATTCCACGATGGACTCCCCCACCAGTAGGTACTGTGATGATCAATTGTGACGCTGCTCTGTTTCAATCTTCTNGTCAAATGGCATTGGGTTCCTCATACGCGACCATGATGGAAGATGTCTACTGGCTCTCAATGAACGAGTCCAGAATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013374