BGIOSGA013408

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Revision as of 10:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013408| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013408, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013408

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013408, complete gene.

LocusTag

OSJNBA0004L11.6

Ensembl Transcript ID

BGIOSGA013408-TA

Ensembl Protein ID

BGIOSGA013408-PA

Length

2618

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32442259..32444876

Sequence Coding Region

32442259..32442518,32443745..32444015,32444147..32444317,32444745..32444876

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32442259..32444876 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32442259..32444876 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTTCCCGCGCCGCGACATCGAGGCCGCTGGCGCCGGCTCCGGCTCCGGCGACGACGACTCGCCGGCCGCCAAGAGGGGCAAGCCAGAGGCCGCGGGGGCGCGCCCCTCGCTGACGCGGACCGAGGCGGCCGCGGCCGCCTCCGTGCTGGCGCTCTTCCTCGTCGGGATCTTCTGCGTCTTCCGCGCCGCGCCCCGCCGCGAGTTCGAACAGATCCTCCGCCTCCCCCGCAGCCTCGCCGACGTCCGCCTCCTCAAAGACAATCTTGCGGTGTATGCAAGAGATTATCAGGCTAATTTCATACTGGGATATTGCTCAATATACATCTTTATGCAAACATTTATGATCCCTGGAACAATATTCATGTCTTTACTTGCTGGAGCTCTTTTTGGGGTGGTTAAAGGTGGTATTTTGGTCGTATTCACTGCAACAGCAGGTGCTTCGTCTTGCTACTTTGTCTCCAAGTTGATTGGGAGGCCATTGATTAGCTGGTTGTGGCCTGAAAAACTGAGGTATTTCCAGTCAGAGATTGCCAAAAGGAAAGAAAAGCTATTGAATTACATGCTTTTTCTTAGAATTACACCAACTTTACCCAACACATTCATAAACATGGCGTCACCTATTGTTGACATACCTTTCCACATTTTCTTTGCTGCAACACTAATTGGTCTCATCCCAGCATCTTATATCACTGTAAAGGCTGGTAGGGCACTAGGCGATCTAAGATCAGTTAGGGAACTGTATGACTCAAAAACACTAGTAATTCTATTCCTCATTGGAACTGTTGCTGTTGCTCCAACGATTCTGAAAAGGAAGAGAATATACGAATGA</cdnaseq>

Protein Sequence

<aaseq>MPFPRRDIEAAGAGSGSGDDDSPAAKRGKPEAAGARPSLTRTEAAAAASVLALFLVGIFCVFRAAPRREFEQILRLPRSLADVRLLKDNLAVYARDYQANFILGYCSIYIFMQTFMIPGTIFMSLLAGALFGVVKGGILVVFTATAGASSCYFVSKLIGRPLISWLWPEKLRYFQSEIAKRKEKLLNYMLFLRITPTLPNTFINMASPIVDIPFHIFFAATLIGLIPASYITVKAGRALGDLRSVRELYDSKTLVILFLIGTVAVAPTILKRKRIYE</aaseq>

Gene Sequence

<dnaseqindica>1..260#1487..1757#1889..2059#2487..2618#ATGCCGTTCCCGCGCCGCGACATCGAGGCCGCTGGCGCCGGCTCCGGCTCCGGCGACGACGACTCGCCGGCCGCCAAGAGGGGCAAGCCAGAGGCCGCGGGGGCGCGCCCCTCGCTGACGCGGACCGAGGCGGCCGCGGCCGCCTCCGTGCTGGCGCTCTTCCTCGTCGGGATCTTCTGCGTCTTCCGCGCCGCGCCCCGCCGCGAGTTCGAACAGATCCTCCGCCTCCCCCGCAGCCTCGCCGACGTCCGCCTCCTCAAGTAAGCTTCCCCCTCTCCGCTTTCTCCCACCAGATCGACCTGGATCGCAGTCATTCTTGTGCGAGAAGAGCAGTTTGGATCGTCCGTCCAACCATCAACTGTTTCGGGGGTGCAAATTTTGGGCGTGATTTGAGTTTGGATTTGATTGCAATAATTTATTGGTGACACGAGATTGAACATGTTTGAATGTAAAGAATCTGAAACTGTTTTAGATTGTGCAAGAATTAGATAATCATGATACGAACAGCAAGTGGCTACTCGTTTGATGGGACTTGGGAAATGATAAAATGGGTTTTATGGTTGATCTTACATTGTCAGAAAAACGATCCAACCCGTCAAGTCAAATAGTTGATCTTAAATTGTCAGAAAAATGGGACTAACCAAATAATTGCTGGAGATTAGCAGGGTTAGGAGTTCGGCTGTGAGATTTTGACTAAGTCCCTTGTTGTGGACAATAATTTCTTTTAGGATCATGCAGTATTCAATGTGCAAAATATAAATATACTTGCAACATTTGGTCGGGTACAATATTCTTATGCGTCTAATATGAGTAAGGTTACTCTGCAGGTCGTCCATGGATACATTTCTCATTGTTTGTTAGTTCAATTGTAAGTTTTATCCATGGCCTAATCAGAACTGTAAGCAGAACTGTAGGCAGTAAAACTCTGACTAACATAACGTGTAACCTCTATATTGCACTCTATACTGCACTGACTTGCATGTGATGTTTGTATTTGTTTTTGACTTACATTTTAGATTTTCTGCCTGGTTGCTCATGTTTCCTTTCAGTTCACTTGATCATGTGATAAGATGAATGAGAAGCTGAAATACTAATTCATCACTTATTTTGATGTACTCCTACATTTAGTTATACCTGTCGGTCACATATAATATTCTTCTACAGAAAGTTCTGGTTATATATCATGCCTTTTCGTTACAAGAACGTCTATGCGTTATTGGTATAAGTCAGTGTTGGCAGAAATATCTGTCTTGTTTCATTCTGAATATAGACTGTAGGAAATACATGTTCAAGTTTCTACGACTGATCTTCTGCTTGAATTTTATCATGGAATAACAAGGAAATTATCCATCTTCATATTCATAGGGATGGGCATGTCTATTTATTTACTAGTAAAACGATCATAGAGTATGATAGCAAATTAGCAAGTGAAAGACATCAGAATGACGAAGTCTTCACCACTGACACTTATCCCTGAAACTTGCAGAGACAATCTTGCGGTGTATGCAAGAGATTATCAGGCTAATTTCATACTGGGATATTGCTCAATATACATCTTTATGCAAACATTTATGATCCCTGGAACAATATTCATGTCTTTACTTGCTGGAGCTCTTTTTGGGGTGGTTAAAGGTGGTATTTTGGTCGTATTCACTGCAACAGCAGGTGCTTCGTCTTGCTACTTTGTCTCCAAGTTGATTGGGAGGCCATTGATTAGCTGGTTGTGGCCTGAAAAACTGAGGTATTTCCAGTCAGAGGTAATCTTCTGCTTTTAATAATGTGACCTCATGTTTGTTCACTGACTTCCTTTTTCTTGAGATTCTTTGGCAAATGCTAATTTCACACATTTTCTTCATTTCATATAACAGATGCTTTTGTTTCTATGCAGATTGCCAAAAGGAAAGAAAAGCTATTGAATTACATGCTTTTTCTTAGAATTACACCAACTTTACCCAACACATTCATAAACATGGCGTCACCTATTGTTGACATACCTTTCCACATTTTCTTTGCTGCAACACTAATTGGTCTCATCCCAGCATCTTATATCACTGTAAAGGTAAATACCTTCTCAATAGTAAATTTAATGATCATATTGCCTTCTCAATAATAGGTTTAATGATCTTATTGTTTGACTCAGCTTTGCCTTTACTTTAGAGCAAGGCAAAAATCTCAACTAGAATCCATGTTGTATGTTAAGAATTCGCATTAAAGATGGGCTAGTGCTTAAGTACTGATTCAAGTATCATGATTTATTATCTTAATACTATAGCATTGCTCTTTTGCCAAGTTTTCGGGCACAACACTACAACAGGAGATGACGGTGTATTATGTTTCATGAACTGTCTTTGCACTTTGCACGTCTTCTCCGTTGACTTCAGGATTTACTTAGTTGTGGACGGGTTTGGTGGTTGATCTGATTGTATTATCTGTTTCCAGTGATACCATTTTATCTACTCATCACCATTCTTACTGCTGTCTTGCAGGCTGGTAGGGCACTAGGCGATCTAAGATCAGTTAGGGAACTGTATGACTCAAAAACACTAGTAATTCTATTCCTCATTGGAACTGTTGCTGTTGCTCCAACGATTCTGAAAAGGAAGAGAATATACGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013408