BGIOSGA013409

From RiceWiki
Revision as of 10:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013409| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013409, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013409

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013409, complete gene.

LocusTag

OSJNBA0004L11.5

Ensembl Transcript ID

BGIOSGA013409-TA

Ensembl Protein ID

BGIOSGA013409-PA

Length

1584

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32446294..32447877

Sequence Coding Region

32446294..32446392,32447078..32447317,32447701..32447877

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32446294..32447877 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32446294..32447877 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCCTCTCGATGGTCTCCGTCCCCATCGCCACCTCCTCCCTGCCCCTCTCCGCCCGAGGCCGCAGCTCTTCCGTCTCCTTCCCCGCTCCCAAGAAAGGGGGTATTGGTCATGGTGGCCTGCAGATCGAGTGCATTCGTATTGGTGGAGTGGAGATCCCGAACCACAAGAGGGTAGAGTACTCACTGCAGTACATCCATGGCATTGGGCGGTCACGCTCCCGTCAGATCCTCTTGGACCTCAATTTTGACAACAAGGTCACAAAGGACCTCTCCGAGGAGGAAGTCATCATTCTCCGTAAGGAGGTTACCAAGTACATGATTGAGGGAGACCTTAAACGGTTTAATCGTGTGGCGATTGAGAGGTTGAAGGAGATTAGGTGTTACAGGGGCATCCGCCACAAGCTAGGGCTGCCAGTTCGTGGACAGAGGACGAAGAACAATTGCAGGACGCTGAAGGGAAGGAGGGCTTCTGTTGCGAAGAAGAAGTCGCCTGCTTCCCAGGAGGAATAA</cdnaseq>

Protein Sequence

<aaseq>MATLSMVSVPIATSSLPLSARGRSSSVSFPAPKKGGIGHGGLQIECIRIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFDNKVTKDLSEEEVIILRKEVTKYMIEGDLKRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLKGRRASVAKKKSPASQEE</aaseq>

Gene Sequence

<dnaseqindica>1..99#785..1024#1408..1584#ATGGCGACCCTCTCGATGGTCTCCGTCCCCATCGCCACCTCCTCCCTGCCCCTCTCCGCCCGAGGCCGCAGCTCTTCCGTCTCCTTCCCCGCTCCCAAGGTGAGAAGCAAAGCCACCCCTCCCCCCTCCGCGCCCACTTCTTGTTCGGCCATTTGCTCGCTCGTCCTGTTCCTTGGTTCTGTGCGATTGATATGTGATTCACGCATGACGCATCGTACATCCGTATCACTTATTGCAACTCAACCCCTGGGATCGTTTTGTTATCTTTGCCATCTTGGAGGTTGGGGAGGCTAGTGGCCGTGCTTTGTGTACTACAGTACTAATTTTGAGTATGTGCAATTCAGTAGTTTTTTTTCCGTGATGTTGGAAGAACAGTGTTCCTGTGCAATTTTAGAATTATTGGCATCTGTGAGGAACTAGTATTTATATGCTTGTATGCTTATGAGTTTGAATCTCTGCCCCTAGCACATATCATGTTGGAAGAATGGATAGTGTTATGAAGTAGTATTTCTTTGGATAGCAGAGTGTATATGTAATTCATGTAGGGACTAGGAATAGCAAAGAAGGTTAATTATGCATATAGGATGTAAAAAGAATCGTAATTCCTTGTTAGTACTCCCTCAGTTTCATACTATAAGTAGTCAAAGTTCTTTAGGTTTGACCAAGTTTAAAGAAAAAATTTCCCCACCCCATTATCTTTACTTGCCCAGTCATTTGTAGGCCTGTGCTTTTAACTGTGTTGTGGTTTTGATTCTTTTTTTTATTATTATTGGGTACTGGACAGAAAGGGGGTATTGGTCATGGTGGCCTGCAGATCGAGTGCATTCGTATTGGTGGAGTGGAGATCCCGAACCACAAGAGGGTAGAGTACTCACTGCAGTACATCCATGGCATTGGGCGGTCACGCTCCCGTCAGATCCTCTTGGACCTCAATTTTGACAACAAGGTCACAAAGGACCTCTCCGAGGAGGAAGTCATCATTCTCCGTAAGGAGGTTACCAAGTACATGATTGAGGGAGACCTTGTAATGGCCCTATCCCTTGCTAATTCATCACTTAACTTTTTTTCTGTAATTTTGGTGATTAGTATGGTTACCCTACTTTGGTACTTCCTCCGTTTCACAATATAAGTCATTCTAGCATTTCTCACATTCATATTGATACTAATGAATCTAGATAGATATATATGTCTAGATTCATTAGCATCAATATGAATGTGGTAAATGTTAGAATGACTTACATTGTGAAACGGAGGGAGTAGCATGTTGAAGATTCCTTGAAATTTGGTACCCTTAAACTGATCGTTCTGAAAAAAAAAAGACTCTGTAGTTCTTTTCCCATTTCTGTCATCGTGGATTTATGTTGTGTTGCTAAAATAGAGTTCTGATGTGTTTGCCATGCTTTACAGAAACGGTTTAATCGTGTGGCGATTGAGAGGTTGAAGGAGATTAGGTGTTACAGGGGCATCCGCCACAAGCTAGGGCTGCCAGTTCGTGGACAGAGGACGAAGAACAATTGCAGGACGCTGAAGGGAAGGAGGGCTTCTGTTGCGAAGAAGAAGTCGCCTGCTTCCCAGGAGGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013409