BGIOSGA013411

From RiceWiki
Revision as of 10:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013411| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013411, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013411

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013411, complete gene.

LocusTag

OSJNBA0004L11.1

Ensembl Transcript ID

BGIOSGA013411-TA

Ensembl Protein ID

BGIOSGA013411-PA

Length

4926

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32459494..32464419

Sequence Coding Region

32459494..32459695,32460005..32460433,32460588..32461360,32462600..32462791,32463670..32463831
,32463949..32464419

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32459494..32464419 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32459494..32464419 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGGAGGGATAATTTCCTTCAGCCCCCTGCCGCCGCCGCCGCCCCAGCCGCCGGCGGCGGAAAGGGCCTCCCGGTCCCCGCCACAGGGGACGCGACGAACCTGACCTCGTCGTCGAGCTCCACCTCCTCCCTCACGCTGTCCCCTCCGGACTTCCTGCGTCAGGTTCAGGCCGCGCTGAAGCGGCATAGGCCTACCGGTTCGATGCAGTCCAATCAACCACGAGCAACCCGAGTCCTGGTGTCCCGAGGTGAGGGCTCAACGAAAGCTGTTGCCAACCCTTCTGTGGCACAAAATCCGGAAGGCAAGGTTGTGCAGCAGAGGAGAGGCCCGCTGGGGGCTTCCAGGTTGCGAAATGCAGCTCCTGATCAGAACAAAGCTGTTGTCTCAAGTCAAGACGAATTGTTGTTGACTACGCCTTTGACATTGGGAACTATCACTGATACCCATGATCAGAATGGTGGTCAGAACCACCAGCCGAAAAGTGACACTGATCTCTTGGTGGATAGGAAGAAATCGTCAATGGAAGTTTCTTCCTCCCAGATGGCATGCGCAAATGCATTGGTAGGGGAAGATTTCAAAAAAGACCTATTCTATTTGACTAGCGATCCGCAGTTAACTTCTCAGACAGGAGATAATTTTCCTGTCGCTCAAGTAGCAGATGATCAAGGCAAGAACCACAAGGAGATTGGGATTGCTAGCGCAGCAGTTGAGATGGATATCAAGTATGATGCAGCTAACTTGTCCCGAAGAATTGATGAGGCTTGTGATCAGAATCATGGAGAGCCAATGACTCGTTGCTCTGCCATGGGTTCATCAGTGACTGCTGTATCTTTATATTCAGGGCCTACTATTCAAAGTAAAAGTGCTGCTCAGATTGATCAATATGCTTCACCAGCTCAGATGCCACAATGTGGCAGAGAATCATCTGGTGTATCAGGTCATGGCTCTCAAAAACTGCATGGAGTGGCAATGAATCATGCTGATTGCAATACCAACAAACAGCAGGTTGATACCAATGGTGGGATGGACAAACCTGTTTCTAGTAGTGCAGTTTGTTTGCCATCCCAAGGGTTATCTGGGAATGATCAATCTTTGTCTGCCAAGGATGATGGTGCTCCTAGACGAAGCAAGGTTGAAAAGGAGCGTCGCAAAAAGAATTATGATCCGGATGTATTCTTTAAAGTGAATGGAAAACTTTATCAGAAGCTAGGTAAAATAGGGTCTGGAGGCAGCAGTGAAGTTCACAAAGTTATATCAGCCGAGTGTACAATATATGCCCTGAAAAAAATAAAACTTAAAGGTCGGGACTACCCTACTGCCTATGGCTTTTGCCAAGAAATTGAGTACCTAAACAAGTTGAAAGGAAAGAGTAATATCATACAGTTGATTGATTATGAGGTCACTGATAAAAGTTTGCTTCAAGATGATTCGCTGTCACCCAGAGATGGGAGAATTAAGGATGATCACTACATTTATATGGTCCTTGAGTATGGTGAAATTGATTTAGCTAATATGGTTGCTCAGGAGTGGAAGGAGAGGAACACCTCAAATATGAAAATAGATGAAAATTGGCTACGTTTTTATTGGCAGCAAATGCTTAAAGCTGTCAATACAATACATGAGGAACGGATAGTGCACTCCGATTTGAAGCCTGCAAATTTTTTGCTTGTGAGGGGTGCACTGAAACTTATTGACTTTGGCATTGCTAAAGCAATAATGAATGATACCACAAACATTCAACGTGATTCTCAGATTGGAACACTGAACTATATGTCACCTGAAGCATTCATGTGCAATGAGCAGGACTCGGGTGGTAATGTTATCAAGTGTGGACGTCCATCTGATATTTGGTCTCTTGGTTGTATTCTTTACCAGATGGTGTATGGTAAGACACCATTTGCTGATTACAAGAATTTCTGGGCCAAGTTTAAAGTAGTTACTGATAAGAACCACAAGATCAAGTATGAACCGGTAGATAATCCATGGCTTATTGATTTAATGCAACGATGCCTTGCATGGGACCGAAATGATCGATGGAGAATACCTCAATTGCTTGAGCACCCGTTCCTTGTTCCTTTGGTTCCAAGGGATTTACCTTCAATTGACCAAGACCCGTGTAGGTTGCTGATGGAGAGGGTTAGAGTTCACTGGGCCAATCCCAAGCTTCATAGTTTTATTGCAGAGCTCGAGAAGGATCAATGCCGTCCAGCCACTCAAATGTAA</cdnaseq>

Protein Sequence

<aaseq>MERRDNFLQPPAAAAAPAAGGGKGLPVPATGDATNLTSSSSSTSSLTLSPPDFLRQVQAALKRHRPTGSMQSNQPRATRVLVSRGEGSTKAVANPSVAQNPEGKVVQQRRGPLGASRLRNAAPDQNKAVVSSQDELLLTTPLTLGTITDTHDQNGGQNHQPKSDTDLLVDRKKSSMEVSSSQMACANALVGEDFKKDLFYLTSDPQLTSQTGDNFPVAQVADDQGKNHKEIGIASAAVEMDIKYDAANLSRRIDEACDQNHGEPMTRCSAMGSSVTAVSLYSGPTIQSKSAAQIDQYASPAQMPQCGRESSGVSGHGSQKLHGVAMNHADCNTNKQQVDTNGGMDKPVSSSAVCLPSQGLSGNDQSLSAKDDGAPRRSKVEKERRKKNYDPDVFFKVNGKLYQKLGKIGSGGSSEVHKVISAECTIYALKKIKLKGRDYPTAYGFCQEIEYLNKLKGKSNIIQLIDYEVTDKSLLQDDSLSPRDGRIKDDHYIYMVLEYGEIDLANMVAQEWKERNTSNMKIDENWLRFYWQQMLKAVNTIHEERIVHSDLKPANFLLVRGALKLIDFGIAKAIMNDTTNIQRDSQIGTLNYMSPEAFMCNEQDSGGNVIKCGRPSDIWSLGCILYQMVYGKTPFADYKNFWAKFKVVTDKNHKIKYEPVDNPWLIDLMQRCLAWDRNDRWRIPQLLEHPFLVPLVPRDLPSIDQDPCRLLMERVRVHWANPKLHSFIAELEKDQCRPATQM</aaseq>

Gene Sequence

<dnaseqindica>1..202#512..940#1095..1867#3107..3298#4177..4338#4456..4926#ATGGAGAGGAGGGATAATTTCCTTCAGCCCCCTGCCGCCGCCGCCGCCCCAGCCGCCGGCGGCGGAAAGGGCCTCCCGGTCCCCGCCACAGGGGACGCGACGAACCTGACCTCGTCGTCGAGCTCCACCTCCTCCCTCACGCTGTCCCCTCCGGACTTCCTGCGTCAGGTTCAGGCCGCGCTGAAGCGGCATAGGCCTACCGGTGAGTGGAATCTAGCCCTGCACTCCCCTGCTGTTGCTTCCGCCTAGGGTTCTAGTTACCCGTTTGACGCTTGTCCTCGTTCAAACCTAACTGGAGTACGTTGGAATTCACTAGTACCAGACATTCTACATGGGGTTACTGATCTGATAATTAGCTAGTTTACTGGGGACTCTGTATCAAATTTCATTATTAAGCTTGTTTTGAAATTTTAGATATCAATTGTGATGTTGTTTGATGAACATATTGGTCGGAATGGATTTATTTATCTATAATGTGCCGTTTATTCGCTTTGGATTGAATGCCTCGTAGGTTCGATGCAGTCCAATCAACCACGAGCAACCCGAGTCCTGGTGTCCCGAGGTGAGGGCTCAACGAAAGCTGTTGCCAACCCTTCTGTGGCACAAAATCCGGAAGGCAAGGTTGTGCAGCAGAGGAGAGGCCCGCTGGGGGCTTCCAGGTTGCGAAATGCAGCTCCTGATCAGAACAAAGCTGTTGTCTCAAGTCAAGACGAATTGTTGTTGACTACGCCTTTGACATTGGGAACTATCACTGATACCCATGATCAGAATGGTGGTCAGAACCACCAGCCGAAAAGTGACACTGATCTCTTGGTGGATAGGAAGAAATCGTCAATGGAAGTTTCTTCCTCCCAGATGGCATGCGCAAATGCATTGGTAGGGGAAGATTTCAAAAAAGACCTATTCTATTTGACTAGCGATCCGCAGTTAACTTCTCAGAGTAAGATTCCCCCCTTTCTGGCTCCTTTGAAGTTCAATTCAAACTTGAATCCATGTTTAGTTATCAGTTTACGGTGCAGGTGATAATGTAGGTTTAACTGCTGGTAGTAGAATGGACAGTATGTTGTCTTATCTTCATTCTGTTTCATTGACAGCAGGAGATAATTTTCCTGTCGCTCAAGTAGCAGATGATCAAGGCAAGAACCACAAGGAGATTGGGATTGCTAGCGCAGCAGTTGAGATGGATATCAAGTATGATGCAGCTAACTTGTCCCGAAGAATTGATGAGGCTTGTGATCAGAATCATGGAGAGCCAATGACTCGTTGCTCTGCCATGGGTTCATCAGTGACTGCTGTATCTTTATATTCAGGGCCTACTATTCAAAGTAAAAGTGCTGCTCAGATTGATCAATATGCTTCACCAGCTCAGATGCCACAATGTGGCAGAGAATCATCTGGTGTATCAGGTCATGGCTCTCAAAAACTGCATGGAGTGGCAATGAATCATGCTGATTGCAATACCAACAAACAGCAGGTTGATACCAATGGTGGGATGGACAAACCTGTTTCTAGTAGTGCAGTTTGTTTGCCATCCCAAGGGTTATCTGGGAATGATCAATCTTTGTCTGCCAAGGATGATGGTGCTCCTAGACGAAGCAAGGTTGAAAAGGAGCGTCGCAAAAAGAATTATGATCCGGATGTATTCTTTAAAGTGAATGGAAAACTTTATCAGAAGCTAGGTAAAATAGGGTCTGGAGGCAGCAGTGAAGTTCACAAAGTTATATCAGCCGAGTGTACAATATATGCCCTGAAAAAAATAAAACTTAAAGGTCGGGACTACCCTACTGCCTATGGCTTTTGCCAAGAAATTGAGTACCTAAACAAGTTGAAAGGAAAGAGTAATATCATACAGTTGATTGATTATGAGGTACTAGTTATTATTCTTATCTCCATTATTTTTTTAATGACATTTTTTGTGGTTGGAATGTCAAAAGTTGATGCCGGTACCTCCACTGAAAAGATTATTGTGTAATTTGTTTTTTGTAGTATCCGAAATTGAGCTTTGGATGTGAGTTTCCGCTGCAATATATTGCTAGTAATTATGAAATTATGGTCATATGAAAGTACTTCCGAACCCAAAGTTAAAAGATATTGCTTTTTGTGTGACTAAACCTGGATATTGTAGGTCTAATGGTTGGTAAATGTTTGTCTCACTCCCTCTAAATTTATGATGCCTTGGAAATTCATAATTTCATATGTCCAGGATACCTGTTGTTATTGAAACAGACTAATTTGATATCATGTACAAAGAATTTACTGGTGCTTCATCACCTAAACAAAGATAGCATTGCTTCTGTTGTAGCAAAAAAATGTGTTTCTTGACTTGTGCAATTATGTAACCTTCTAGTCCCTAATGGTCTTTTTTTATTATTATGTAACCATCATATCATAACTTCTAGCTCGGTTATCTTTCTAGAACCTATAATATAGAAGGATTAAGGGTTTATGACTTTATGTTAGCTCAAAAGAACCGCTACCATCTTAAGTATTGGCATTTTTTCAATGTTGTAGTTTGAGAAACTCAAGCAGTAGTTCAGTTTTATTGTTGGAAATTCTTAATAGGCACATGCAATACTACCTTCCCTGTGGTTTGTTGGTATCAGTTGCACTTTCCTATAATATGCATATGCATACCCATATGATCCATATTTTTGCACGGAAGTTTGATACACTGTATAATGTAAACTTGCTCATCATTTCTATGTTTTCTGCATTGAGTGTGACCAGTACCTGTTGATGTATTCTTAAAATTTTTATCACCTCCTTCAAATTTCCAGAGCCCAACATCTTTTAGAACTTCCATTCTTCAAAAAAAAAAATATAACTAAGCGATATAGAACTTTCTGGCTACAATTTATAGGTTCCAAACTTCCAGTAAAAATGGAAAATGTGTAGTTCACTACATTTAAGAAACTAAACATTATATTTTAAGTAACCTTGTCACTGATGATTGATAATTTAATATTTCAACCGACCATGATGTATGAAGACCAATTTAAGCATATGTGGACTTCGATAAAATATGCTATTATCTAATTGACCCTTTATAATTTTGTTGTCAGGAGATAATATTGTTTAATCTGCCTTTGGATTTTGTCTGTGCCAGGTCACTGATAAAAGTTTGCTTCAAGATGATTCGCTGTCACCCAGAGATGGGAGAATTAAGGATGATCACTACATTTATATGGTCCTTGAGTATGGTGAAATTGATTTAGCTAATATGGTTGCTCAGGAGTGGAAGGAGAGGAACACCTCAAATATGAAAATAGATGAAAATTGGCTACGTTTTTATTGGCAGGTAACTTTTCTTTTTATGCAATATAGCTGAAACAAGATACAAATGGGTCAATAGAAACAATTGTGGTCAACCTAGTAAAATGAAGGTGATCAACCCTTCTGCTGTAGGGTATTTGTCCACAAAAGAAATATCTTCTAATCTGTATGACAAATGTACTGTTGATTCACGGAATTTATCTTAGAATACCATAGACCCATAGTATCATTACATTTCGTAGTTACCCACTATTATTGTTGGTTTTAATACTACTGAATGGTTATATACTTAGACCAAGCGTACTTAGCGGCAGCTGATTTGCTAGCAATTTGTTGATTTGTTATATCTTTAATTGATCAATTGTTAATTGAGCAAACCATCCATGTAGTAATCCGAGAACTTGTGTAGGCTTGTAGGAATGCTCTCGATTTATGAATCCCTCAACTGAAGAATTCTGTAGAGAAGTTCTGTACATTTGCTCTCAGTACATACATATAGGCATGAGCTTTCCAAATTTCATTCTGACATATTCTGCATGGAGTATGGTACAAATATCTGTACGTTTGTACCTTCGTGTTGCAGTGCTTACCCTGTTCATTCTGTTTACCAAGAAAGTTGTGAATAAAGTGAGGCAACATCTCTATGCAGTGCTTGCACTTAATGTAACATGGTTTTACAGTTCATGCTTATGTTGTAAACTTGTAAAATAGGAGGCAGCATGGTTCAGTATGATATATCACATAATGTCATGTGCAACTTTCACCTTTGTCCATTTTGGTTAGGCATGCATTTATGTAGAATGTCACAAAATGGTTGATATAGTACCTATATTATGCTTAGGGTTTCTCTGATTCTGGGTTTTATAAAATATAGTACCTTATCAGTTTTCCTTTGTGCTGTAGCAAATGCTTAAAGCTGTCAATACAATACATGAGGAACGGATAGTGCACTCCGATTTGAAGCCTGCAAATTTTTTGCTTGTGAGGGGTGCACTGAAACTTATTGACTTTGGCATTGCTAAAGCAATAATGAATGATACCACAAACATTCAACGTGATTCTCAGGTACCAACAGATGATTTGGGATGTAGCATTCATGGATATATTGGTTAAGAATATCGATGTCCACTACAGATATTGTTGTCTTGCTTTCTAATCGTGGTTTCTCACTGTATTGTGCAGATTGGAACACTGAACTATATGTCACCTGAAGCATTCATGTGCAATGAGCAGGACTCGGGTGGTAATGTTATCAAGTGTGGACGTCCATCTGATATTTGGTCTCTTGGTTGTATTCTTTACCAGATGGTGTATGGTAAGACACCATTTGCTGATTACAAGAATTTCTGGGCCAAGTTTAAAGTAGTTACTGATAAGAACCACAAGATCAAGTATGAACCGGTAGATAATCCATGGCTTATTGATTTAATGCAACGATGCCTTGCATGGGACCGAAATGATCGATGGAGAATACCTCAATTGCTTGAGCACCCGTTCCTTGTTCCTTTGGTTCCAAGGGATTTACCTTCAATTGACCAAGACCCGTGTAGGTTGCTGATGGAGAGGGTTAGAGTTCACTGGGCCAATCCCAAGCTTCATAGTTTTATTGCAGAGCTCGAGAAGGATCAATGCCGTCCAGCCACTCAAATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013411