BGIOSGA013443

From RiceWiki
Revision as of 10:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013443| Description = Threonine dehydratase biosynthetic| Definition = Oryza sativa Indica Group BGIOSGA013443, complete gene.| tag = | ti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013443

Description

Threonine dehydratase biosynthetic

Definition

Oryza sativa Indica Group BGIOSGA013443, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA013443-TA

Ensembl Protein ID

BGIOSGA013443-PA

Length

3289

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33023556..33026844

Sequence Coding Region

33023556..33023702,33023803..33024072,33025084..33025332,33025412..33025485,33025677..33025794
,33026300..33026434,33026692..33026844

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33023556..33026844 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33023556..33026844 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGCAAAGCTCTCGCGTGAACAGTTGGAGAGGGGTGTCATCTGCTCCTCTGCTGGGAACCATGCCCAGGGAGTGGCCCTTTCCGCTCAAAGACTCGGTTGCGATGCTGTTATTGTCATGCCTGTGACAACGCCTGAAATCAAGTGGCGATCGGTGGAGAGATTGGGTGCAACAGTTGTACTCAAAGGGGACTCATATGATGAAGCTCAATCATATGCAAAACAAAGATGCGAGCAGGAAGGCCGCACATTCATACCTCCTTTTGACCATCCTGATGTTATAAGTGGACAAGGAACGATTGGCATGGAAATTGTTCGGCAGTTGCAAGGCCCACTTCATGCCATATTTGTACCTGTAGGAGGAGGTGGATTAATTGCTGGGATCGCTGCCTATGTAAAAAGGGTTCGCCCAGAGGATATGTTTGAGGAGAAAAGAAGCATACTTGAACCTGCTGGTGCCCTTGCGCTGGCAGGAGCTGAAGCTTACTGCAAATACTATGGCTTGAAAGGGGAAAATGTTGTTGCAATAACTAGTGGAGCAAATATGAACTTTGATCGGCTCAGATTAGTAACTGAGCTGGCTGATGTTGGTCGAAAACGAGAAGCAGTTCTTGCCACATTTTTGCCAGAGGAGCAGGGAAGCTTCAAAAAGTTTGCAGAGCTGGTTGGCCGGATGAATATTACTGAATTCAAATACAGATACGATTGCAATGCAAAAGATGCCCTTGTCCTTTACAGTGTTGGCATCTACACTGACGATGAACTTAAAGCAATGGTGGAACGTATGGAATCTTCAAAATTGAGAACTGTTGATCTTACTGACAATGATTTGGCAAAGGATCATCTAAGATACTTTATTGGTGGCAGGTCAGAAGTAACAGATGAACTTGTTTACCGGTTCATTTTCCCAGAAAGGCCTGGTGCACTTATGAAATTTTTGGATGCATTCAGCCCCCGCTGGAATATCAGCCTTTTCCATTACCGTGCACAGGGTGAAACCGGAGCGAATGTTTTGGTTGGCATACAAGTGCCGCCGGAGGAGTTTGACGAATTCAAGAGCCGTGCTGACAATCTTGGGTACGAGTACATGTCGGAGCAGAACAACGAGATATACCGGCTCCTCTTGCGCGATCCGAAGATCTAA</cdnaseq>

Protein Sequence

<aaseq>MMAKLSREQLERGVICSSAGNHAQGVALSAQRLGCDAVIVMPVTTPEIKWRSVERLGATVVLKGDSYDEAQSYAKQRCEQEGRTFIPPFDHPDVISGQGTIGMEIVRQLQGPLHAIFVPVGGGGLIAGIAAYVKRVRPEDMFEEKRSILEPAGALALAGAEAYCKYYGLKGENVVAITSGANMNFDRLRLVTELADVGRKREAVLATFLPEEQGSFKKFAELVGRMNITEFKYRYDCNAKDALVLYSVGIYTDDELKAMVERMESSKLRTVDLTDNDLAKDHLRYFIGGRSEVTDELVYRFIFPERPGALMKFLDAFSPRWNISLFHYRAQGETGANVLVGIQVPPEEFDEFKSRADNLGYEYMSEQNNEIYRLLLRDPKI</aaseq>

Gene Sequence

<dnaseqindica>1..147#248..517#1529..1777#1857..1930#2122..2239#2745..2879#3137..3289#ATGATGGCAAAGCTCTCGCGTGAACAGTTGGAGAGGGGTGTCATCTGCTCCTCTGCTGGGAACCATGCCCAGGGAGTGGCCCTTTCCGCTCAAAGACTCGGTTGCGATGCTGTTATTGTCATGCCTGTGACAACGCCTGAAATCAAGGTTCTTGATCTGCAGATTTCATCACTTTAAGCCTGTCCTTCTATGTGATTTATCTTACCTTTTGCTCATTACATAGTAAACCTATTGTTTTGAATTCTAGTGGCGATCGGTGGAGAGATTGGGTGCAACAGTTGTACTCAAAGGGGACTCATATGATGAAGCTCAATCATATGCAAAACAAAGATGCGAGCAGGAAGGCCGCACATTCATACCTCCTTTTGACCATCCTGATGTTATAAGTGGACAAGGAACGATTGGCATGGAAATTGTTCGGCAGTTGCAAGGCCCACTTCATGCCATATTTGTACCTGTAGGAGGAGGTGGATTAATTGCTGGGATCGCTGCCTATGTAAAAAGGGTTCGCCCAGAGGTTAGCTTCCTATTTTTCTAGACTAGTTTTCTTTAAGCCTCAAAGCACGGGTTAAGGACTGATCCACAGGGAGGGGCTGGCTTTCATGACCATTTTCGGTCTAGTTTCAGGTGCTTCTTAATTATAATACCTTGGGAGGTCTTTCCCTTTGGGGCCAAGTTCGTTTTTTTAATGCAAGAGGAAACAAACCTCTTTATAAATGTCATCATGGAGCATGGCAATAGTTTTAAGCCCAAATTGGGGGGTATTAAGTTGTTTTTCGGACCTAGTTGTAGCTGTTATCAGTGTTGCAATTAATATATGTGTTTCATTGCATTGTTGCACTCTAGTCAGGTTGGGATGGAATGTTCTGTATATTTTACAGCAGCTCTTCTACAGGTGAAAATAATTGGAGTGGAGCCATCAGATGCAAATGCAATGGCATTGTCCTTGTGTCATGGTCAAAGGGTCATGCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAACTGTAGATGGTATTGTTCTTGTCAGTCGAGATGCTATTTGTGCTTCAATAAAGGTATGAACTCACGATTATTTGTGTCTTGTTTTACATAATATTTTAGATTGTTGTTAAAACTGAACACTAACCTGTTTCTCTCAACTAACTTAAATCCCAACTGCTCCATTAAAGGTACTGGTTTCAATAAAAGAAAAAGAAATATACACCGGTTTCCTGCATCAAAATTCTATATTGCAGTGGTCTGTGAATACTATGCTCCATAGTTTAAAAAGATTACTTGTTCAAAACCCTCTGTAGCGGACATGTCTTATAAATGTTGTACACTAGCCTAGTTTTTTGTGAGTTGCTTGTGGGCATTGGTTTTCAACTAATGTATAATCCTATTCCATTGACATTCTTTATAGGGTGCTAGGAATCTATGATCGGACTACTGCTATATTCCAATCTTACCCTTATAATGCTTCTGCGGTTCTGCCCTATAATTTTTTTTGGTCATGGCTGCAGGATATGTTTGAGGAGAAAAGAAGCATACTTGAACCTGCTGGTGCCCTTGCGCTGGCAGGAGCTGAAGCTTACTGCAAATACTATGGCTTGAAAGGGGAAAATGTTGTTGCAATAACTAGTGGAGCAAATATGAACTTTGATCGGCTCAGATTAGTAACTGAGCTGGCTGATGTTGGTCGAAAACGAGAAGCAGTTCTTGCCACATTTTTGCCAGAGGAGCAGGGAAGCTTCAAAAAGTTTGCAGAGCTGGTATGCCTTGCGGTATTTCTACCAATATGTAAAAATTTGCAACTTCTAATTTCATTTCTTTTCTTCCAACTCTCTGCAGGTTGGCCGGATGAATATTACTGAATTCAAATACAGATACGATTGCAATGCAAAAGATGCCCTTGTCCTTTACAGGTACATGGACACTAATATGTTAATAGCATTGTGCATTAACATCAAGGATCTTTGGGCTCACTATCCAACATATAATTTCTTTACTATTTTCTGTTGACACTTATTTATGGAAAGAATATGGCGTCCCTTGCTCTTTTATATTCTTGGGCTCCTGGCTAACTATACGATTGCTTTGATTTTATATATCCCAGTGTTGGCATCTACACTGACGATGAACTTAAAGCAATGGTGGAACGTATGGAATCTTCAAAATTGAGAACTGTTGATCTTACTGACAATGATTTGGCAAAGGATCATCTAAGATACTTTGTAAGTTGGATTTCTCTGCCAATTTTATAACAATGCCACACATTTTTTTGGAAACTAAATCTAATCACTTTTAGAGTAAATGACACTAACAGTGATTAAACGTGTCTACAGTTTCATCTAGGTCCCTAAACATCCTCAGTGATAGCATTGCAAGTGCCATAAAATTCATTACTGAATTTGTGCATGCAAACATGTTACAACTGGTTTTATAGAGATGTTCCAGTTGAAAAGGCTGCAGATAAATTGATGAAATTATCAACTGCTACATTGTAAATAAGAACTTGTTTGGTGCAACAAGCAGTCAATCATATGTCCGTGCCTCTGGTTTTGCCTTGTGATTCAAATAAAAAAAATTACCTCCCAAAACACAGATATGTCCAAGTTAATTTTGTGAACCTCTGCTAAATTTTGTTGCAGCTGATCTTAAGGGATGGTGTTCTTTTAATTTGTTTATATTCAAATATGCGGCTACCTTAATTTGCTTTTCCTTTCCATCTATTTTCAGATTGGTGGCAGGTCAGAAGTAACAGATGAACTTGTTTACCGGTTCATTTTCCCAGAAAGGCCTGGTGCACTTATGAAATTTTTGGATGCATTCAGCCCCCGCTGGAATATCAGCCTTTTCCATTACCGTGCACAGGTGTGTGACAGATTTATTATTCATCAGTTTCCCTGCTGTAAAGTAGTCTTGTATGAAAATTGCAATCTCATGCATCTGAAATCGTCATTTTATTGCCATCTATCCTGTACAATATTCCCTTTCCATTTTCACTTGACAAAAATGTACATCTAAATTGTGTTGAGACTTAACATATTGGTTACATTAGTTCTGCCGAACTTGCAAAACCCTTAAACATCTTAGTGAACTCCAGCATATACGTAAATTATCATCTGCAGGGTGAAACCGGAGCGAATGTTTTGGTTGGCATACAAGTGCCGCCGGAGGAGTTTGACGAATTCAAGAGCCGTGCTGACAATCTTGGGTACGAGTACATGTCGGAGCAGAACAACGAGATATACCGGCTCCTCTTGCGCGATCCGAAGATCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013443