BGIOSGA013444

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Revision as of 10:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013444| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013444, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013444

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013444, complete gene.

LocusTag

OSJNBA0014G15.4

Ensembl Transcript ID

BGIOSGA013444-TA

Ensembl Protein ID

BGIOSGA013444-PA

Length

5258

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33029275..33034532

Sequence Coding Region

33029275..33029412,33029525..33029588,33029697..33029801,33030222..33030323,33031015..33031065
,33031147..33031208,33031544..33031634,33031791..33031855,33031933..33032127
,33032226..33032345,33032510..33032580,33032719..33032944,33033354..33033404
,33033509..33033737,33034020..33034159,33034407..33034532

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33029275..33034532 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33029275..33034532 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGATGGGGAGCCTGATCGGGCTGGTGAACCGGATCCAGCGGGCGTGCACCGTCCTCGGCGACCACGGGGGCGGCGGCGAGGGGGGTTCCCTCTGGGAGGCGCTGCCCTCCGTCGCCGTCGTCGGAGGCCAGAGTTCCGGGAAGTCGTCGGTGCTCGAGAGCATAGTGGGGAGGGACTTCCTGCCTCGTGGATCCGGAATCGTGACGAGGAGGCCTCTTGTGCTGCAGCTGCACAAGACGGAGGGTGGGCAGGAGTACGCCGAGTTCCTCCACGCCCCGCGGAAGCGTTTCACTGACTTTGCTGCTGTTAGGAAAGAGATTGCTGATGAAACCGATCGCATTACTGGAAAAACGAAAGCTATATCAAATATTCCCATCCATTTGAGTATATATTCTCCACATGTTGTAAACCTGACACTTATTGATCTTCCTGGATTGACGAAGGTTGCTGTAGAGGGGCAACAAGAATCTATTGTCCAAGATATTGAAAACATGGTTCGGTCTTATGTTGATAAGCCAAATTCTATCATACTGGCCATATCTCCAGCTAATCAAGATATAGCAACATCAGATGCTATCAAGCTTGCTAGGGATGTTGATCCTTCAGGTGACAGAACCTTTGGAGTGTTGACAAAGCTTGATTTGATGGATAAGGGTACCAATGCTGTTGATGTACTTGAAGGGAGGCAGTATCGTTTGCAACACCCCTGGGTGGGAATTGTCAACCGGTCACAAGCTGATATCAACAGGAATGTCGACATGCTAGCAGCAAGACGCAAAGAAAAGGAGTACTTTGAAAGTAGCCCAGATTATGGTCACTTGGCACATAAAATGGGTGCAGAGTACCTTGCTAAGCTTCTGTCTCAGCACTTAGAGGCTGTGATCAGAGCAAAAATTCCAAGTATTATAGCCATGATTAACAAAACAATTGATGAAATTGAAGCTGAGTTGGATCGCCTTGGTAGGCCAATTGGAGGTGATGCTGGGGCACAACTGTACACAATATTGGACATGTGTCGTGCGTTTGACCGAGTTTTTAAAGAGCACCTAGATGGCGGTCGGCCAGGTGGAGATCGTATTTATGGTGTCTTTGACCACCAATTACCAGCAGCACTGAAAAAGCTTCCATTTGATAAGCATCTTTCATTGCAAAATGTTCGGAAAGTCATTTCAGAGGCTGATGGTTATCAACCCCACTTGATTGCCCCTGAGCAAGGGTACAGAAGGCTTATAGATAGTTCGCTCCACTACTTCAGGGGTCCAGCGGAAGCTTCAGTTGATGCGGTTCATTTGGTCTTGAAGGAACTTGTTCGTAGATCGATTGCAGCAACAGAGGAGTTGAAGCGTTTCCCAACACTTCAGACAGATATAGCTGCTGCAGCAAATGAAAGCCTGGAAAGATTTCGTGAGGATGGTCGAAAGACAGTTATTCGTCTTGTTGAGATGGAGGCCAGCTACCTAACTGTAGAATTTTTCAGAAAACTCCCTACAGAACCAGATAAGGGGGCTAATAATAACACTCCAGCCAATGACAGATATCAGGACAACCATTTAAGAAGAATCGGGTCAAATGTATCATCTTACATTAACATGGTTTGTGAGACATTGAGGAACACCATTCCAAAAGCTGTGGTGCACTGTCAAGTGAAGGAGGCAAAAAGAAACTTGCTTAACCGTTTCTATGCTCATGTGGGAAGCAAGGAGAAGAAACAGCTCAGCGCGATGTTGGATGAGGATCCCGCTTTGATGGAGAAGAGGGATTCCTTAGTCAAGAGGCTAGAGCTGTACAAATCTGCCCGGAACGAGATCGACTCAGTCGCGTGGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MATMGSLIGLVNRIQRACTVLGDHGGGGEGGSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTEGGQEYAEFLHAPRKRFTDFAAVRKEIADETDRITGKTKAISNIPIHLSIYSPHVVNLTLIDLPGLTKVAVEGQQESIVQDIENMVRSYVDKPNSIILAISPANQDIATSDAIKLARDVDPSGDRTFGVLTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINRNVDMLAARRKEKEYFESSPDYGHLAHKMGAEYLAKLLSQHLEAVIRAKIPSIIAMINKTIDEIEAELDRLGRPIGGDAGAQLYTILDMCRAFDRVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFDKHLSLQNVRKVISEADGYQPHLIAPEQGYRRLIDSSLHYFRGPAEASVDAVHLVLKELVRRSIAATEELKRFPTLQTDIAAAANESLERFREDGRKTVIRLVEMEASYLTVEFFRKLPTEPDKGANNNTPANDRYQDNHLRRIGSNVSSYINMVCETLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKRLELYKSARNEIDSVAWK</aaseq>

Gene Sequence

<dnaseqindica>1..138#251..314#423..527#948..1049#1741..1791#1873..1934#2270..2360#2517..2581#2659..2853#2952..3071#3236..3306#3445..3670#4080..4130#4235..4463#4746..4885#5133..5258#ATGGCGACGATGGGGAGCCTGATCGGGCTGGTGAACCGGATCCAGCGGGCGTGCACCGTCCTCGGCGACCACGGGGGCGGCGGCGAGGGGGGTTCCCTCTGGGAGGCGCTGCCCTCCGTCGCCGTCGTCGGAGGCCAGGTACGCGTGCTCGCCACCACCCTGCGTACCTACCTCTCAGATCCAAAGCCATGGCGGCCAGATCTGGATATGGCGCTCACCCCCCTTCGGTTTGCGTTTGTGATGCATCCAGAGTTCCGGGAAGTCGTCGGTGCTCGAGAGCATAGTGGGGAGGGACTTCCTGCCTCGTGGATCCGGTAATGCCGACGCTGGATCGCTCGTTTTTTTTTCTTTTTTCGCGCGCCATTTCGTCTGGATCGGCTTGGTTTGCGAGGGATTAATGCGCATTCTCTCGGTTTGATTAGGAATCGTGACGAGGAGGCCTCTTGTGCTGCAGCTGCACAAGACGGAGGGTGGGCAGGAGTACGCCGAGTTCCTCCACGCCCCGCGGAAGCGTTTCACTGACTTTGGTAAGGGATCATTGCCATATTTGTGCTTTGCAGTCCAGCAGGTTGATTTGTGTATTCAATTTCATTTATTAGAGTTAGTGTTGTGCAAACTTCAAAGTTGTCTTAATTCCAACGAGTAGACTTTTCCACGAGAGATCAGCAAGGAGGATGATACCGCTTTCCCTGGTTATAGTTTACTTCACTGAAGTTTGCCTATCAACCTAAAAACAAGAACATATACAATTAGCATCCACACATTGCTATATGCAGTGTGAACTAAGGAACTAATGACGTTTAGGAGTAGATCTCACAAGTCACAATCACTGTAGGATACTAGTGAGTATCTGAGCAAAGTTATTTCCCGGTTCATTACTAGTGTCCTAACATAGCTATTGCAAGAGATGTTCAGTTGAAATATTTAAATTCTTTGTATAATTGCAGCTGCTGTTAGGAAAGAGATTGCTGATGAAACCGATCGCATTACTGGAAAAACGAAAGCTATATCAAATATTCCCATCCATTTGAGTATATATTCTCCACATGGTAAGTCTTGATGCTTGTTTTGAACTTTTGGTATGTGATGTGTACTATGAATGTTTCATTCAAACAGAACCTGCTTCGCTGACTCGCTCTCAGCTCCCCCAAATGCCTGTAAACTTTAAATTGTATGTTGTGGATGAAATTTGGGATCAATAGGATGTAGACTGATAATTTCTACTATTACTTTTACATTTTTAAATTTGGATTCCTTTCAGGATTTATCCCTTATAATTCTTCAAAACTTGAGAGCTGGCATATGTTTCCTTTAAAAAAAATGTATATTTGCTCTGCTCTCCACCTGTTCTTAGTTCTGATGTTGGTCTAAACCCCTCCATTGTGGTCCTTTCAGACTAATCACACCAAACTGTATGAGGCATCTCTGCAGATTTATATTAGCACTTCAAAATTTCATGTTTGATATTAATAATCGACCCTGCTTTATATGCAACAAAATTAAGCATCAAAATATTGACTATAGAAACAATTCAAAAGGTGTACATAAAAGGAATCATTCTGGAAATCTATTTCTTAACCCTGAGGAACAAATAATCATATTATGATAATTTGAAAGTAGTTACATTGTGCTTGTGCTGCAGCATATGACCTGTTATATAGAGACGTTTTGTGCTCAGCAGATCCTAGTCCTTGTCATAAATTTTTTCACTAATGTAATTTTGCACCCATTTTCTTGCAGTTGTAAACCTGACACTTATTGATCTTCCTGGATTGACGAAGGTTGCTGTAGGTATGTTTTCTTGGATGCTTCTAGTTTTCTATGCGTACTCTTTTTATGTGATTGTTTGTGACACGAACTTTTTATTAACAGAGGGGCAACAAGAATCTATTGTCCAAGATATTGAAAACATGGTTCGGTCTTATGTTGATAAGGTAAAAGAAGTCTGTTGCATGCCATTAGTGCCATGTTTATTTTAGCTCCATGTGCTACATTCACTTAATGAGTACTGTCCACCCTGCCATATCAATTCTAAGCTTTACTATTGTTCTTGTCCAATGTTTATTTGTGGTGACAGTTTTTTTTTCTGGGGTGGGTAGTGGGTACTACGAGTCAAGTCTAGAAACATTATTCTTTTGTTCTCTGGCCTGTCTTATGGTCATGCTAATATAACTTAATGTATTTCTATATGCTGCAAATTCTGCTTGGTCATGTTCTGATTAAAACTGTTCATTTTTGTTCCTACATTTGTTCTTTTTGGAAACTTCAGCCAAATTCTATCATACTGGCCATATCTCCAGCTAATCAAGATATAGCAACATCAGATGCTATCAAGCTTGCTAGGGATGTTGATCCTTCAGGTACATTTTATATTTTCTTCACTGTGGCATTTCAAATATTTCTCACATATGACAATAATTTTATGCATATTTTATTTTATTGCCATACAGCAGTATTGCAGTGATCTGTCTTGTTCCATTCTTATCTGTTGACAATTTATTTCATAATATTTTTAGGTGACAGAACCTTTGGAGTGTTGACAAAGCTTGATTTGATGGATAAGGGTACCAATGCTGTTGATGTATGTGACTTGTCATTTTTTCTTAACTCTTGTACGCTATGGACACAGCACTCATTTTCAACGCCATGTAATCCTAGGTACTTGAAGGGAGGCAGTATCGTTTGCAACACCCCTGGGTGGGAATTGTCAACCGGTCACAAGCTGATATCAACAGGAATGTCGACATGCTAGCAGCAAGACGCAAAGAAAAGGAGTACTTTGAAAGTAGCCCAGATTATGGTCACTTGGCACATAAAATGGGTGCAGAGTACCTTGCTAAGCTTCTGTCTCAGGTCAGGGCATTTTGCTATTGTGGTGTACTTTCCCTCTCCCCAAAAAATAACTGGATTGAAAAGGCTGACTGCTGATACACTTCTATTTACACATTCAGCACTTAGAGGCTGTGATCAGAGCAAAAATTCCAAGTATTATAGCCATGATTAACAAAACAATTGATGAAATTGAAGCTGAGTTGGATCGCCTTGGTAGGCCAATTGGAGGTGATGCTGGGGTAAGAAAAACCGTACTTTGCTTGTTGTAACTTTCTGCAAGTGTTCAGGTTCATGTTGTTCGTGCCACAACCTGCAACATTCATTTGAATGGCACCCTAGCACATTATCTATTCCCAAACCATGTCTACATCATGCTGTCTCATAAACTTATCATAATCTACAGGCACAACTGTACACAATATTGGACATGTGTCGTGCGTTTGACCGAGTTTTTAAAGAGCACCTAGATGGCGGGTAAGATATTTTATTAGGCCCTTTTCTTGAGTGCTGTTGCTTTTTATGCCATATATATTGATAAATAGTATCCCATAGATGAATGGCAAAGAATCTACAGGCATGTTAATAACACTCAATTATTTTTTGTTCTCTTAGTCGGCCAGGTGGAGATCGTATTTATGGTGTCTTTGACCACCAATTACCAGCAGCACTGAAAAAGCTTCCATTTGATAAGCATCTTTCATTGCAAAATGTTCGGAAAGTCATTTCAGAGGCTGATGGTTATCAACCCCACTTGATTGCCCCTGAGCAAGGGTACAGAAGGCTTATAGATAGTTCGCTCCACTACTTCAGGGGTCCAGCGGAAGCTTCAGTTGATGCGGTATACTTCTCATCAATAGATCTTCTTTAGGCACTTTTAATTTAATTATTAAGCAAGTAGGATCCTGTTCCAATGACTGATATATAGACTTACATAAACTAGCCTTTTCTTATCCAATATATACATTTTCCCCCTGTGTTGAACAACTAAAACATCATATGAGAAGATTGCAGAACCATGACGAGCTTCTTGTCAAAGTAGTGAATATAAGAGTGCTTAAGTTCATCAAGTGCTCAATTGCGGAAAGAGAGGGATACTATAGATTTAATTGGAATGTACCATTTGTTTATTCAACAAAGGAAGGCATTTGATTCCAGTGCTTTTGGGGGCATTTTCATATGTCAAGCCATATTGCACTACGTCTGTTTTGTTCACTACATCTGGTTGATTATGTTCTCGTATCTGCTAGGTTCATTTGGTCTTGAAGGAACTTGTTCGTAGATCGATTGCAGCAACAGAGGTTTGTGTTGATTTTCAATTCTCAGTGAACCTCAGTAGATATTACTGATCACTCAATGACACTCCTGCATTGACTGTTTACATTGGTTATCTTGGATGCCACAGGAGTTGAAGCGTTTCCCAACACTTCAGACAGATATAGCTGCTGCAGCAAATGAAAGCCTGGAAAGATTTCGTGAGGATGGTCGAAAGACAGTTATTCGTCTTGTTGAGATGGAGGCCAGCTACCTAACTGTAGAATTTTTCAGAAAACTCCCTACAGAACCAGATAAGGGGGCTAATAATAACACTCCAGCCAATGACAGATATCAGGACAACCATTTAAGAAGAATCGGTAACAATTCAACATTCTATTTTGTTTCTTTAATGGCAATTGATTGAGTCAACTGTTCTAAGACCTCAACACAGAGGTCACACGAAGTACTTAACAAACTGACTTAATAAGCAGAATCTAAGATGTAACATAGGGTACTAGTGCCATTCACGTTCTGCTGAGTGCTGACACTAGCAAACATGTCAAGATATGACCATATGTGAATTTCGATGACAACAATTATGCGAACTAATTTTTTAAATCGACAAAGTATATTCATGACATCATCATTGTTTTATTCAGGGTCAAATGTATCATCTTACATTAACATGGTTTGTGAGACATTGAGGAACACCATTCCAAAAGCTGTGGTGCACTGTCAAGTGAAGGAGGCAAAAAGAAACTTGCTTAACCGTTTCTATGCTCATGTGGGAAGCAAGGAGGTATGTTTTATACTACCTTAGTTCAAAACTAAAAAAAGATAACGTGTTTCATAGTGATTAGAAAGTTGGCTCATAATTAATATCGAGTAAATTGCACTCTACTTCAAAATATTAACCATCCATTTCAAAATATATGTACACTGTATTTGTGGCTAAATGAAAATTTTCTTGTTTTATCCTTGTGTCGCATTGATTTGCACATTTATATTAACTTGGACACCATTTGCTTTTTATTTCCATAACGCAGAAGAAACAGCTCAGCGCGATGTTGGATGAGGATCCCGCTTTGATGGAGAAGAGGGATTCCTTAGTCAAGAGGCTAGAGCTGTACAAATCTGCCCGGAACGAGATCGACTCAGTCGCGTGGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013444