BGIOSGA013463

From RiceWiki
Revision as of 10:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013463| Description = | Definition = Oryza sativa Indica Group BGIOSGA013463, complete gene.| tag = | tid = BGIOSGA013463-TA| pid = BGIOS...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013463

Description

'

Definition

Oryza sativa Indica Group BGIOSGA013463, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA013463-TA

Ensembl Protein ID

BGIOSGA013463-PA

Length

1547

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33310335..33311881

Sequence Coding Region

33310335..33310394,33310478..33310871,33311121..33311734,33311816..33311881

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33310335..33311881 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33310335..33311881 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGACGCCGAGGATATCCAGCCCCTCGTCTGCGATAATGGAACTGGTATGGTCAAGGCTGGGTTCGCCGGAGATGATGCGCCCAGGGCTGTCTTCCCCAGCATTGTCGGCCGCCCTCGCCACACCGGTGTCATGGTCGGAATGGGCCAGAAGGACGCCTACGTCGGCGACGAGGCGCAGTCCAAGAGGGGTATCTTGACCCTCAAGTACCCCATCGAGCATGGTATCGTCAGCAACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTGGCCCCGGAGGAGCACCCCGTCCTCCTCACCGAGGCTCCTCTCAACCCCAAGGCCAATCGTGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACACCCCTGCTATGTACGTCGCCATCCAGGCCGTCCTCTCTCTGTATGCCAGTGGTCGTACCACAGGTATTGTGTTGGACTCTGGTGATGGTGTCAGCCACACTGTCCCCATCTATGAAGGATATGCTCTCCCCCATGCTATCCTTCGTCTCGACCTTGCTGGGCGTGATCTCACTGATTACCTCATGAAGATCCTGACGGAGCGTGGTTACTCATTCACCACAACGGCCGAGCGGGAAATTGTGAGGGACATGAAGGAGAAGCTTTCCTACATCGCCCTGGACTATGACCAGGAAATGGAGACTGCCAAGACCAGCTCCTCCGTGGAGAAGAGCTACGAGCTTCCTGATGGACAGGTTATCACCATTGGTGCTGAGCGTTTCCGCTGCCCTGAGGTCCTCTTCCAGCCTTCCTTCATAGGAATGGAAGCTGCGGGTATCCATGAGACTACATACAACTCCATCATGAAGTGCGACGTGGATATTAGGAAGGATCTATATGGCAACATCGTTCTCAGTGGTGGTACCACTATGTTCCCTGGCATTGCTGACAGGATGAGCAAGGAGATCACTGCCTTGGCTCCTAGCAGCATGAAGATCAAGGTGGTCGCCCCTCCTGAAAGGAAGTACAGTGTCTGGATTGGAGGATCCATCTTGGCATCTCTCAGCACATTCCAGCAGATGTGGATTGCCAAGGCTGAGTACGACGAGTCTGGCCCATCCATTGTGCACAGGAAATGCTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF</aaseq>

Gene Sequence

<dnaseqindica>1..60#144..537#787..1400#1482..1547#ATGGCTGACGCCGAGGATATCCAGCCCCTCGTCTGCGATAATGGAACTGGTATGGTCAAGGTAAGCTGTTTGGATCTCAGGGTGGTTTCCGTTTACCGAAATGCTGCATTTCTTGGTAGCAAAACTGAGGTGGTTTGTGTCAGGCTGGGTTCGCCGGAGATGATGCGCCCAGGGCTGTCTTCCCCAGCATTGTCGGCCGCCCTCGCCACACCGGTGTCATGGTCGGAATGGGCCAGAAGGACGCCTACGTCGGCGACGAGGCGCAGTCCAAGAGGGGTATCTTGACCCTCAAGTACCCCATCGAGCATGGTATCGTCAGCAACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTGGCCCCGGAGGAGCACCCCGTCCTCCTCACCGAGGCTCCTCTCAACCCCAAGGCCAATCGTGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACACCCCTGCTATGTACGTCGCCATCCAGGCCGTCCTCTCTCTGTATGCCAGTGGTCGTACCACAGGTGAGCACATTCGACACTGAACTAAAAGGCTGTGAGGATGAATTTTAATTTTGACATTCACATGTAGATGAGATTTAGTTCTGCAATCTTCAATTGTCATACAGCAAGACTATATAATAGCTTTCAAAATAAAATCATAGGCAGTTCTCATAAATGGAATCATGTTTGAACATCCTAATTCTGTTGGCATGGAGTGCTTTGACATTTTGATGTGCTACAGTTGTGAATAACTGAATTTCCTTTTCCCAGGTATTGTGTTGGACTCTGGTGATGGTGTCAGCCACACTGTCCCCATCTATGAAGGATATGCTCTCCCCCATGCTATCCTTCGTCTCGACCTTGCTGGGCGTGATCTCACTGATTACCTCATGAAGATCCTGACGGAGCGTGGTTACTCATTCACCACAACGGCCGAGCGGGAAATTGTGAGGGACATGAAGGAGAAGCTTTCCTACATCGCCCTGGACTATGACCAGGAAATGGAGACTGCCAAGACCAGCTCCTCCGTGGAGAAGAGCTACGAGCTTCCTGATGGACAGGTTATCACCATTGGTGCTGAGCGTTTCCGCTGCCCTGAGGTCCTCTTCCAGCCTTCCTTCATAGGAATGGAAGCTGCGGGTATCCATGAGACTACATACAACTCCATCATGAAGTGCGACGTGGATATTAGGAAGGATCTATATGGCAACATCGTTCTCAGTGGTGGTACCACTATGTTCCCTGGCATTGCTGACAGGATGAGCAAGGAGATCACTGCCTTGGCTCCTAGCAGCATGAAGATCAAGGTGGTCGCCCCTCCTGAAAGGAAGTACAGTGTCTGGATTGGAGGATCCATCTTGGCATCTCTCAGCACATTCCAGCAGGTAAATATACAAATGCAGCAATGTAGTGTGTTTACCTCATGAACTTGATCAATTTGCTTACAATGTTGCTTGCCGTTGCAGATGTGGATTGCCAAGGCTGAGTACGACGAGTCTGGCCCATCCATTGTGCACAGGAAATGCTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013463