Os09g0386200

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0386200| Description = U box domain containing protein| Version = NM_001069608.2 GI:297609403 GeneID:4346948| Length = 2238 bp| Definition...")
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Gene Name

Os09g0386200

Description

U box domain containing protein

Version

NM_001069608.2 GI:297609403 GeneID:4346948

Length

2238 bp

Definition

Oryza sativa Japonica Group Os09g0386200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13768834..13771071

Sequence Coding Region

13769233..13770876

Expression

GEO Profiles:Os09g0386200

Genome Context

<gbrowseImage1> name=NC_008402:13768834..13771071 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13768834..13771071 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgcgggccgccctcgccgctggaagctgccgttccaccgcagcgcgccgtcgtctccctcctccccgccggaccccgagccccactcgcctgcgcgttcggcggttgttgttgttgcggaggaagaagcgcctccggccgagttcgtgtgctcgatcctgggcgcgctcatggccgacccggtgatcctcccgtcggggcagacgtacgagcgcgcctgcctccaggcctgcgcggagctcgcgttcctgccgcccgggatggggtccgcctccgacgcggtgatacccaacgcggcgctcaaggcggcgattgggacctggtgcgcgcgctccggtagggtggtgccggcgccgccgtcggccgatgctgctcgggaggccgtgctccgcgcgatgccggccgatgcggcgaagtcggtgaggacccggcgggcggcgctggcgagctcgtccaattcgtcctactcgtcgccggcgtccgccgcgtcgacgtcgtcgtacacgtcttcgtcggagattattccggcggaggacgaggttggtgtgaagcccgtgaaggaggggacaaacaaggatgcggtccgggagcaggtggagatggcggttgatccgctcgaggacgtggtggttgccaaggtgatggatgcggaggaggaggaggaggtggtcttggccgttgccggcctccgggaggccacgcgggagagcgcggagcggcggcgcgcgctctgcacgccgcggatgctcggcgcgctccgccgcgtgctgctcatcccgcgccacgccagcgctcgtgtcgacgcgacggccgcgctggtgaacctcacgctcgagccggcgaacaaggtgcgcatcgtccgcgcgggcgccgtgccgccgctcgtcgaggtgctccgctcgagcacgtcgccgccggaggcccgtgagcacgcggccggcgcgctcttcggcctcgccctgaacgaggacaaccgcgccgccatcggcgtgctcggcgcggtgcctcccctcctcgacctgctcacctcccccgcccacgccgcgcccgcgcgccgcgacgccgggatggcgctctaccacctctccctcgccgccgtcaaccagtccaagatcgcccgcttcccgggcgcgcccaaggctctcctcgccgtcgcgtccagcgccgccgagcggatgcccatccgtaggctggcgctcatggtcgtctgcaacgtggccgcctgcacggagggccgcgcggcgctgatggacgcgggcgccgtggcggccgtcaccgccatcctctcccacgacacccgcagcgccgagctcgacgagtggtgcgtcgcggcgatgtacgccatgagccgtggcagcctccggttccgcggcctcgcgcgcgccgccggcgcggacgcggccctccgccgcgtcgccgaggagtgcgccccgggcatcgtgcggcgcgacatggcgaggaagacgctccgggccatgcggaacgaggccgacgacgcggccgacctgaccggcagcagcctcgagtgcggcgacggcgacgactgcgccgggagcatcgtgtccgacggcctcatgtccttccgccgccggcagcgcgagctcgggtcctcgtcgtgcggcaacacggccgaattctaa</cdnaseq>

Protein Sequence

<aaseq>MGAGRPRRWKLPFHRSAPSSPSSPPDPEPHSPARSAVVVVAEEE APPAEFVCSILGALMADPVILPSGQTYERACLQACAELAFLPPGMGSASDAVIPNAAL KAAIGTWCARSGRVVPAPPSADAAREAVLRAMPADAAKSVRTRRAALASSSNSSYSSP ASAASTSSYTSSSEIIPAEDEVGVKPVKEGTNKDAVREQVEMAVDPLEDVVVAKVMDA EEEEEVVLAVAGLREATRESAERRRALCTPRMLGALRRVLLIPRHASARVDATAALVN LTLEPANKVRIVRAGAVPPLVEVLRSSTSPPEAREHAAGALFGLALNEDNRAAIGVLG AVPPLLDLLTSPAHAAPARRDAGMALYHLSLAAVNQSKIARFPGAPKALLAVASSAAE RMPIRRLALMVVCNVAACTEGRAALMDAGAVAAVTAILSHDTRSAELDEWCVAAMYAM SRGSLRFRGLARAAGADAALRRVAEECAPGIVRRDMARKTLRAMRNEADDAADLTGSS LECGDGDDCAGSIVSDGLMSFRRRQRELGSSSCGNTAEF</aaseq>

Gene Sequence

<dnaseqindica>196..1839#agttccagccaaggcacccacaaaccacccgaaccccaaaagagaaaaataaaaaaacaaacccaaaccccccgagacccaatggccgccacagcaaaagcatcactacctccacctcctagctcctctagctcctcctcccctcgccgccaccgccgccgctgaacaccacccccgcagccgcgcgcgcgtttcatgggtgcgggccgccctcgccgctggaagctgccgttccaccgcagcgcgccgtcgtctccctcctccccgccggaccccgagccccactcgcctgcgcgttcggcggttgttgttgttgcggaggaagaagcgcctccggccgagttcgtgtgctcgatcctgggcgcgctcatggccgacccggtgatcctcccgtcggggcagacgtacgagcgcgcctgcctccaggcctgcgcggagctcgcgttcctgccgcccgggatggggtccgcctccgacgcggtgatacccaacgcggcgctcaaggcggcgattgggacctggtgcgcgcgctccggtagggtggtgccggcgccgccgtcggccgatgctgctcgggaggccgtgctccgcgcgatgccggccgatgcggcgaagtcggtgaggacccggcgggcggcgctggcgagctcgtccaattcgtcctactcgtcgccggcgtccgccgcgtcgacgtcgtcgtacacgtcttcgtcggagattattccggcggaggacgaggttggtgtgaagcccgtgaaggaggggacaaacaaggatgcggtccgggagcaggtggagatggcggttgatccgctcgaggacgtggtggttgccaaggtgatggatgcggaggaggaggaggaggtggtcttggccgttgccggcctccgggaggccacgcgggagagcgcggagcggcggcgcgcgctctgcacgccgcggatgctcggcgcgctccgccgcgtgctgctcatcccgcgccacgccagcgctcgtgtcgacgcgacggccgcgctggtgaacctcacgctcgagccggcgaacaaggtgcgcatcgtccgcgcgggcgccgtgccgccgctcgtcgaggtgctccgctcgagcacgtcgccgccggaggcccgtgagcacgcggccggcgcgctcttcggcctcgccctgaacgaggacaaccgcgccgccatcggcgtgctcggcgcggtgcctcccctcctcgacctgctcacctcccccgcccacgccgcgcccgcgcgccgcgacgccgggatggcgctctaccacctctccctcgccgccgtcaaccagtccaagatcgcccgcttcccgggcgcgcccaaggctctcctcgccgtcgcgtccagcgccgccgagcggatgcccatccgtaggctggcgctcatggtcgtctgcaacgtggccgcctgcacggagggccgcgcggcgctgatggacgcgggcgccgtggcggccgtcaccgccatcctctcccacgacacccgcagcgccgagctcgacgagtggtgcgtcgcggcgatgtacgccatgagccgtggcagcctccggttccgcggcctcgcgcgcgccgccggcgcggacgcggccctccgccgcgtcgccgaggagtgcgccccgggcatcgtgcggcgcgacatggcgaggaagacgctccgggccatgcggaacgaggccgacgacgcggccgacctgaccggcagcagcctcgagtgcggcgacggcgacgactgcgccgggagcatcgtgtccgacggcctcatgtccttccgccgccggcagcgcgagctcgggtcctcgtcgtgcggcaacacggccgaattctaaaccaccaccaccaccaccaccgtgtgattgattgattccaccgaatacctagtacaccattagacagttgaggcaattaggtacgcggattgcgacagctgccatcgctggtcgacgccggcgaggtcgccatggcggcggcggcgccggcgagctcccatgtgtagtgcactttgtgctcggatgtgtaaagttgacagggctcgcgacgcgcgtgtggcgggtgttgcttgcaagccagagtaatggcattgttctgtgtgtactttccaaacttaggcattgttcaggaagaaagacgcatgtgtctgaaattcttctgaatttctgcatctgtaaataagatcaaaatccttttgctccgatccaatccaattacactagtgcttagcacctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0386200, RefSeq:Os09g0386200