BGIOSGA013478

From RiceWiki
Revision as of 10:02, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013478| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013478, complete gene.| tag = OsI_133...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013478

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013478, complete gene.

LocusTag

OsI_13333

Ensembl Transcript ID

BGIOSGA013478-TA

Ensembl Protein ID

BGIOSGA013478-PA

Length

3078

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33564840..33567917

Sequence Coding Region

33564840..33564969,33566135..33566310,33566600..33566731,33566873..33567254,33567414..33567557
,33567637..33567917

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33564840..33567917 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33564840..33567917 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGCGCAGGAGGCGTCGGCGGAGGAGGCGCTGCGCACCGCCGCGGCCGAGGTCTCCACCTCCTCGACGACGCGCCGCCTCCGCCTCTTCCGCCACACCCTCCCCCATCTCCTCGCCAAGGCGTCAGAGTCACCATCAGATACAACATTGTTAGTTGATCTCATTTTCCAGACATTGCTTATATATGATGATCGGGCATCGAGAAAAGCGGTCGATGATATGGTTATACAGGCTCTTGGTGAATCTACTTTCATGAAACCCTTTGCTGCTTCACTTGTTCAGTGCATGGAAAAGAATATGAAGTCTATGGGAACGTATAAGATGTACATAGATGAGATCAGAGATTCAAGGATTCCAGTCAGGGACTCTCCTGCTTTCTTAAATATAATGCTGGATTTTGCCATCACTTCACCATCATTATATGCTGAGTACAAGCCACTGTTCCTTGATTTGTATGTCAAAACCATCTTGGGTTCAAAAGACCGGCCATCACAAGCATCGGCTGAAGCTTTTAAGCCTCTTTTTTTGGATATGGGACATGAGGACTTTAAAAACATTGTTGTCCCATCATGCATAAAGATGCTGAAAAGAAATCCTGAGATCGTGCTACAATCTATTGGATATCTCCTGAATACAGTCCGTTTAGACCTAAGCAAGTATTGCATGGAGTTTTTGCCAGTTGTGCTGCATCAGGCTCGGCATTCAGTTGAAGAGAGGAGGATTATTGCTTTGAGTACTGTAGGAACATTGAGTGGGAAGTCTAGTGATCCAGACACTCTACTTTCCATGTTCAATGCTATTAAAGCAATTTTAGGAGGCTCAGAGGGCAAATTATCAATTCCATACCAGAGAATTGGAATGATAAATGCTTTGGAGCAGTTGTCAAGATCGCCTCCAAAGCAAATAAGCAGACTAGCTCCCTCGTTGTCCAGTTTCCTTCTAATGTGCTACAAGGATGATGGTATTGAAGAAGTGAAATTGGCAGTTCTCTCAGCTTTGGGATCCTGGGCTTCGGTATCAACTGAAACTGTACAAGCAGATGTTGTTTCATTTATAGCTGCAGGTTTGAAAGAGAAAGACACTTTAAGAAAGGGGCATCTAAAATTAATACGGGCCATATGCAAAAAGTCTGATTCACTGACTAAGGTAAGATTTACTTTCAGTTTTTGTCTACAAAAAGAGTCATCTTCCTATTGGTTTCATTATTTTCCCACAAGATTAGTTGCAAGGCAGGTGATATAA</cdnaseq>

Protein Sequence

<aaseq>MGAQEASAEEALRTAAAEVSTSSTTRRLRLFRHTLPHLLAKASESPSDTTLLVDLIFQTLLIYDDRASRKAVDDMVIQALGESTFMKPFAASLVQCMEKNMKSMGTYKMYIDEIRDSRIPVRDSPAFLNIMLDFAITSPSLYAEYKPLFLDLYVKTILGSKDRPSQASAEAFKPLFLDMGHEDFKNIVVPSCIKMLKRNPEIVLQSIGYLLNTVRLDLSKYCMEFLPVVLHQARHSVEERRIIALSTVGTLSGKSSDPDTLLSMFNAIKAILGGSEGKLSIPYQRIGMINALEQLSRSPPKQISRLAPSLSSFLLMCYKDDGIEEVKLAVLSALGSWASVSTETVQADVVSFIAAGLKEKDTLRKGHLKLIRAICKKSDSLTKVRFTFSFCLQKESSSYWFHYFPTRLVARQVI</aaseq>

Gene Sequence

<dnaseqindica>1..130#1296..1471#1761..1892#2034..2415#2575..2718#2798..3078#ATGGGCGCGCAGGAGGCGTCGGCGGAGGAGGCGCTGCGCACCGCCGCGGCCGAGGTCTCCACCTCCTCGACGACGCGCCGCCTCCGCCTCTTCCGCCACACCCTCCCCCATCTCCTCGCCAAGGCGTCAGGTACCTACGCCGCCATCGCCTCCGCTCCCCCCTATCCCCTGGATCGCGCGTGCTCCCCCCTTCCGTCCGCGGATTAGTCTCCCCGTGCGCGTTCGCTTGCTCCCGTGCTCCTACCCCCCCTTTTTTTTTCTGCGATCGAGAAAATTCTCGGACTCTGATGGCGGATTTGCTTAGATTTGTGGGAGCTAGGGCTCATCGTCCCGCGTGCGCGTTGCTTGTTCGTGTGGTTGCCCAATTCCGTTTTACTTGTAGCGGATCGTAGCTCGTTAGCTTCACTCGTCTGTGAATGTGGTCGCTATCCTGTGTAGATTGAGAATAATAGTGCTTGGTTTTGCTCCTCTTTTGCATCCTTGTCTCGTGTTATGCCATGCGATCTGTAGTGTTATTTTAGTTGCTTAGATTACAGTTAGGTCAGGACTAAGCAGCTACGTAGCTTCTGAGTTGCTTGCTGTTGTTTCATCCTGACATCTGTTTAGTAGTTTTGAACCAAGAGAATGCTTGTATACATTCGTGTGAAGCTAAGTCTCTGCTTGCTTCCAAGTGGTTCCGCAAAGCACCATTGTTTTGTATGTATCTCGTGTTGGTCTGATCTGCAATTATAACTGAATTGCATCGCACGTTAGTCCTGACTGCAAGGGAAGTTGGTTCGTGTGCACTCATCATCTCCCTTTTTCTACTATCTGACCAAAGCTTTTATTATGATAAGCGATTAAGTTCACAGATGCATAGTGTAATCTGAGCCTCCCTTGAAGTACCTGCATTCCTGATGCAGAGCGCCAGAGCATATGCTTCTTTGTGTTGACTAGATTTGATAGTGATATGTCACTCTAAGCTTAATACGTTGGACATGCTTGTTGAATATACCAAACGTGAATATGATGCTACAACTGCATGGTCTCTGTTACCATGCAGTGTATATGTTTATCACACACACTTATGTTACGGCTGTTCATGATTCTCTAGAAAACTTGTTGCAAACAAACCAAGGCCACTGAACTGATGTAATAGATCCCTACACCACCACCACTAATAAGTTAATAACACACACAAACACATACTTTCCTTGCTACGCATCTGGCTGATACACCTTCATTTCATTATACTATTCCATGTATAAGATCGATGCAAAGCTGTTTTTCTTAAGATTGCTTTGTCCCCCCTGCAGAGTCACCATCAGATACAACATTGTTAGTTGATCTCATTTTCCAGACATTGCTTATATATGATGATCGGGCATCGAGAAAAGCGGTCGATGATATGGTTATACAGGCTCTTGGTGAATCTACTTTCATGAAACCCTTTGCTGCTTCACTTGTTCAGTGCATGGAAAAGAATATGAAGGTTACAAGTCCTCTTGCATGCTTCAAGCTTCTCAGATGGTCATGCTATCTTCTGAATTTGAGCCAGTTTGCCATGCTTTCAAAAGGTGGTTTCTCTAGACTTGCCAATGCACAAGCAGTGTTATGTCAAGTCCTAATGGATGGCTCATTTCGTCAGCGCCGTACTTGCAGACAATTGTTTACCCGTCTTTTCTCTGAGGTAATATTTGTTTGAAACAAGTAAATAATTGCACTATTACATGGTTATCAGAATTGCTTTCTGATTATTATTATTTGGTCTCATTTGCCAGTCTATGGGAACGTATAAGATGTACATAGATGAGATCAGAGATTCAAGGATTCCAGTCAGGGACTCTCCTGCTTTCTTAAATATAATGCTGGATTTTGCCATCACTTCACCATCATTATATGCTGAGTACAAGGTAAAACATTGAACCCAGTGCATCACCAAATTTCAGTTATTATCACCCGTGCGTTTTCTCTAACCGCCCCAATAATATGGGACCTGATTTTTCTGGTTAATTTTGTTCATGTGTTTGACAATCTGTTATGATCTCTTTCAGCCACTGTTCCTTGATTTGTATGTCAAAACCATCTTGGGTTCAAAAGACCGGCCATCACAAGCATCGGCTGAAGCTTTTAAGCCTCTTTTTTTGGATATGGGACATGAGGACTTTAAAAACATTGTTGTCCCATCATGCATAAAGATGCTGAAAAGAAATCCTGAGATCGTGCTACAATCTATTGGATATCTCCTGAATACAGTCCGTTTAGACCTAAGCAAGTATTGCATGGAGTTTTTGCCAGTTGTGCTGCATCAGGCTCGGCATTCAGTTGAAGAGAGGAGGATTATTGCTTTGAGTACTGTAGGAACATTGAGTGGGAAGTCTAGTGATCCAGACACTCTACTTTCCATGTTCAATGCTATTAAAGCAATTTTAGGAGGTTGTAAAATGCAGATACATCTCTGTTTTCTGATACCTATTGGCTTATCATATTATTTGTGGGCTCTATTTGTGGTCTACAAATTGTGGCTTTAACTTATGCTGAATACATTAAAATTTTTGGTATTGAAGTCACTTTGACAAGCTTTTGTTTGTGCAGGCTCAGAGGGCAAATTATCAATTCCATACCAGAGAATTGGAATGATAAATGCTTTGGAGCAGTTGTCAAGATCGCCTCCAAAGCAAATAAGCAGACTAGCTCCCTCGTTGTCCAGTTTCCTTCTAATGTGCTACAAGGATGATGGTAAGCCTCAAGTGTTCCACTCTAAGCTTCATACCTTCATTGAGTGGCATTGATTCGTAGCTCTTTTATATTATGTCAGGTATTGAAGAAGTGAAATTGGCAGTTCTCTCAGCTTTGGGATCCTGGGCTTCGGTATCAACTGAAACTGTACAAGCAGATGTTGTTTCATTTATAGCTGCAGGTTTGAAAGAGAAAGACACTTTAAGAAAGGGGCATCTAAAATTAATACGGGCCATATGCAAAAAGTCTGATTCACTGACTAAGGTAAGATTTACTTTCAGTTTTTGTCTACAAAAAGAGTCATCTTCCTATTGGTTTCATTATTTTCCCACAAGATTAGTTGCAAGGCAGGTGATATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013478