BGIOSGA013490

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Revision as of 10:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013490| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013490, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA013490

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013490, complete gene.

LocusTag

OSJNBB0122C16.3

Ensembl Transcript ID

BGIOSGA013490-TA

Ensembl Protein ID

BGIOSGA013490-PA

Length

5266

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33738665..33743930

Sequence Coding Region

33738665..33738988,33739577..33739807,33739931..33740047,33740499..33740656,33741220..33741269
,33741510..33741703,33742407..33742589,33742692..33742810,33742923..33743062
,33743398..33743478,33743827..33743930

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33738665..33743930 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33738665..33743930 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCCGACCGCATCGATGCTGTTCCTGAGCTACCACCAGCTGCACAGGCCCGCCTCTGCGGCGGAGGCGGCGCCGGCCAGCCGGAGGAAGGAGGCGGAGGAGGAGGGGAGTAATGGCGGCGCGGCCGGCGGTCGCGTCCGGGTCAGCCTGAGCAGCGCGCTGTCCCTCCTGGCACGGCGGAGGGAGGCGGCGCCGACGCCGACGCCGCAGGCCGCCGCGGCGAAGGAGGTGACCAGGCGTGGCGGTGGTGGTGGAGATGGCGTCGCCGGCGAGGGTGAGCCGGAGGAGGCGGCGTCGCTGGAGCGTAGGTTCGAGGAGGCGGCCCACGAATACGAGACCTTACTAAAACTGCGGCCCATAGTACGAGGGAACCGCAAACCGCAAGCCGCAAGGTCCTCGGCCTGGTCCGTCTCGTCGATTCCCAAGATTCTCCGCGACGGCGCGGCCGTGCCCTTCTCCTCCCCGGAGCTTCGAGTCGCTCAGCCTCTCGTCGGCTGCTCCCGCCGCTCGCCGCCTGCGCCGCCGCCAGCTCGCGCGGTCATCACCATGAAGATCGCGGTGGAGGGGTGCATGCACGGGGAGCTGGACAAGGTCTACGACACGCTGCGCGAGCTCGAGAAGGCCGAGGGCGTCAAGATCGACCTCCTCCTCTGCTGCGGCGACTTCCAGGCTGTTAGGAACGAGAATGATTTACAGTGTCTTAATGTCAAACCAAGGTTTCGTGAAATGAAATCATTTAGGAAGTACTACTCGGGACAAGCCGTTGCCCCATACCCAACAATCTTCATAGGTGGAAACCACGAAGCATCCAATTATTTGTGGGAACTGTATTATGGAGGATGGGCAGCACCCAACATCTACTTTTTGGGGTTCGCTGGACACTATGAGAGGCCCCCATACAATGAAAACACTATAAGGTCAGTGTACCATGTAAGGCATTATGATGTTCTCAAGTTAATGCATGTGAAGGAGCCTCTAGATATATTCATGTCACATGATTGGCCTCTGGGCATTACTGAGTACGGAAACTGGCAGAAGCTTATTCGGGAGAAAAGATTCTTTGAAGAAGAGGTCAACAAGAGAACACTAGGCAGCGAACCAGCAGCAAGACTACTGAATAAACTAAAACCGCCATACTGGTTTTCAGCTCATCTTCATTGTAAGTTTCCAGCTGTTATCCAACATGGAGAGGGTGGGCCTACAACTAAGTTTCTTGCACTTGATAAATGTCTTCCTCGGCGGGGCTTTCTCCAGGTAATAGACATTCCATCCGGTCCAGGACCACATGAGATCCAGTATGATGAAGAATGGCTTGCAATAACACGGAAATTCAACAATGTTTTCCCCTTAACTCGGATGCCATTTACAATGCTGGATGAACAGGTTGACACTCAAGATGACTTGCAATGGGTTAGGAACAAGTTAAATGCCAGAGGGGCTAAACCTATTGATTTTGTCCAGACTGCTGCATCTTATGATCCTTCTTGTCAAGCATCCAATCCCTCCATAACAGTTCATTGTAGGAATCCACAAACTGAGTCTTTTCTGCAGCTTCTAAATCTCCCGTATCTTCTGGACTCATCAAATTCTTATGGGGTTAGTAGAAATGAGTCAAGCTCCCAGACAGGACAAGCACTTGATAGTGACGACATAGAGCTCCCTGACGATGAAGATGATCCGGCGGACGATGATGACTGA</cdnaseq>

Protein Sequence

<aaseq>MAPTASMLFLSYHQLHRPASAAEAAPASRRKEAEEEGSNGGAAGGRVRVSLSSALSLLARRREAAPTPTPQAAAAKEVTRRGGGGGDGVAGEGEPEEAASLERRFEEAAHEYETLLKLRPIVRGNRKPQAARSSAWSVSSIPKILRDGAAVPFSSPELRVAQPLVGCSRRSPPAPPPARAVITMKIAVEGCMHGELDKVYDTLRELEKAEGVKIDLLLCCGDFQAVRNENDLQCLNVKPRFREMKSFRKYYSGQAVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGHYERPPYNENTIRSVYHVRHYDVLKLMHVKEPLDIFMSHDWPLGITEYGNWQKLIREKRFFEEEVNKRTLGSEPAARLLNKLKPPYWFSAHLHCKFPAVIQHGEGGPTTKFLALDKCLPRRGFLQVIDIPSGPGPHEIQYDEEWLAITRKFNNVFPLTRMPFTMLDEQVDTQDDLQWVRNKLNARGAKPIDFVQTAASYDPSCQASNPSITVHCRNPQTESFLQLLNLPYLLDSSNSYGVSRNESSSQTGQALDSDDIELPDDEDDPADDDD</aaseq>

Gene Sequence

<dnaseqindica>1..324#913..1143#1267..1383#1835..1992#2556..2605#2846..3039#3743..3925#4028..4146#4259..4398#4734..4814#5163..5266#ATGGCCCCGACCGCATCGATGCTGTTCCTGAGCTACCACCAGCTGCACAGGCCCGCCTCTGCGGCGGAGGCGGCGCCGGCCAGCCGGAGGAAGGAGGCGGAGGAGGAGGGGAGTAATGGCGGCGCGGCCGGCGGTCGCGTCCGGGTCAGCCTGAGCAGCGCGCTGTCCCTCCTGGCACGGCGGAGGGAGGCGGCGCCGACGCCGACGCCGCAGGCCGCCGCGGCGAAGGAGGTGACCAGGCGTGGCGGTGGTGGTGGAGATGGCGTCGCCGGCGAGGGTGAGCCGGAGGAGGCGGCGTCGCTGGAGCGTAGGTTCGAGGAGGCGGTCCGGCTCAGCTGCTGGTCTTCTTGAACATCTAAATTAGCTCTTTGCGATAATTGCATATTATCCCACATGTACATAGGTAGTGCTACTGCTGCTAGTGCCAAGCACATGCACCTTTTTTTTTTTCTTTTTTCTTTTGTTTGCTATGATATTGCCGCTCTGTTCCTGCATCTGCATGTTAGCTTGTACATGGATGTATAATCGATTTCCTTTTCTTCTCATTCCTCTTCTTTTTTTTTCGTTCATGTGCTATCTTGTTCTTCACAAGTGCTTGGATCTGTAAACTGTAATCCACAAGAGACGCTTGTACATGAGTTCGTCGACGATTTTACAGCCTTGGTGTTGGCTCCTCCTGTCCAATCCTCTGGCTTAAGAATCGCTCGAGCTAACGAACTCGTCCCTCGCCAAAAAAAAACACAGAGAGAGAGAGAGGCGAATACATTCAGGCAAATAGCGGCTAATGGGCTTCTTGTCACTGAAAGAGCAGTGCTTAGCCCACAAAGCATTCAGGTCCCAAATTAGGGCTCATTAGTATGGGCCAAAATTTAACTAAAATCCCACCCTATACACTGTACGGGCCGGATGTAGGCCCACGAATACGAGACCTTACTAAAACTGCGGCCCATAGTACGAGGGAACCGCAAACCGCAAGCCGCAAGGTCCTCGGCCTGGTCCGTCTCGTCGATTCCCAAGATTCTCCGCGACGGCGCGGCCGTGCCCTTCTCCTCCCCGGAGCTTCGAGTCGCTCAGCCTCTCGTCGGCTGCTCCCGCCGCTCGCCGCCTGCGCCGCCGCCAGCTCGCGCGGTCATCACCATGAAGGTGAGTCAAGGGGGGCGCCTCTTCTCCTCTGTCCTTTTGCCGTTTTGGTTGGGAGGGTGGGCTTCTCTCTGGCCTTGCCGACCATGTGCTCGACGTAATGCCTCGGTGGGTGACCTGTTGCAGATCGCGGTGGAGGGGTGCATGCACGGGGAGCTGGACAAGGTCTACGACACGCTGCGCGAGCTCGAGAAGGCCGAGGGCGTCAAGATCGACCTCCTCCTCTGCTGCGGCGACTTCCAGGTGAGCAGGCCGTGCGCTCTACGTTTTGCTGCGGTTCTTTTCCTTAATTGGGAGGTTTTGCGGAATTGATGCGATTCATGCGGGAAAAAGGTTCAGCGGTCTCGTGTGTATGTTGAAAATAGCATTTGGTGTCCCCGCAGCTGGTTGGAATTTGGGAGTAGTAGTTGTTTGTTTAGTTGGTGGTTTACTTCGACTGATAGGAGTGGCGAAGTAGTGTTAATTCTCTTGTAATCAAATAAAATGTCGATATTCATACTGCTACTCGGCTACTCCAATGCATATGAAGATAAGCTAAACCAAGTCTGTAAGATGAAGCACTTGTGTTTCCAATATTTACTATGAATAAGTACCAGAATGGCTATTAGCTAATCCCCGCTCATTTTCTGATCACGCTCTACCAATGTTCGGCAGTACTCTGCTACATGTTAACATACCTCACCTTTTGATGCAGGCTGTTAGGAACGAGAATGATTTACAGTGTCTTAATGTCAAACCAAGGTTTCGTGAAATGAAATCATTTAGGAAGTACTACTCGGGACAAGCCGTTGCCCCATACCCAACAATCTTCATAGGTGGAAACCACGAAGCATCCAATTATTTGTGGGAACTGTGAGTCTTCTTCATATATGCTTGATGGACCTCTTGCAATACAAAAATGTGGTTTCTCTTTGCTCTGGCCCTAGGGTATACTCGCATCCACTTGATGACACATAATTATAACTGGCATTGAAGAAATTGGTCGGTGTGTATTGTACGCTTTTCCATAGTGTATTTTATATTTTGGTTTTAAATTTCTAATTGGGATTATTCATGTCCAATGATCGCTAGGAATGGCATGAAGTTCATTGTTGAATGAAATTGTTTTGAAATTAAAACTTTCTTTTGGATGATGAAATCACTGTTTTGTTTAGAAATATATATATGAAGGGGATAAAGTATCCTCGTTATTGCCTTTATTGAGTTACACAATATATTTGACTGTCATTGTTCATACTATTGATGTGCCACCTCCATCTTAAATATATGACATTGTTGACTTTTAATAAGATGAATGGTCAAATTTCATGTCCAAAAGTCAACATCGTCATACATTTATAAATAGAGGGAGTATCATTGTTGCTAATTTTAAAAATGTAACTTTGCTACTTTTTTTGTGGTCAAACATCTAATAGGTATTATGGAGGATGGGCAGCACCCAACATCTACTTTTTGGGGTTCGCTGGTGTTGTTAAGTTTGGAAACATTCGAATTGGTGGACTATCAGGAATATATAAGCAACAACATTATCACTTAGGCAAGTTTATTCATATTTTCTTGGGATACCTTGTAATATTTTTCAACTTTTATATCTAGAACATATTGTTTAAAAAGTGGAAGCCTAATGAAAAAACGTCCTAAACTGCAAAAGTAAACACCAATAAACTCTGAATAGAGTATTTTAAACTTATTGCTTCTTATGCAGGACACTATGAGAGGCCCCCATACAATGAAAACACTATAAGGTCAGTGTACCATGTAAGGCATTATGATGTTCTCAAGTTAATGCATGTGAAGGAGCCTCTAGATATATTCATGTCACATGATTGGCCTCTGGGCATTACTGAGTACGGAAACTGGCAGAAGCTTATTCGGGAGAAAAGATTCTTTGAAGAAGAGGTAATACCATCGGTTACACAACATTTTTAAAGACTAGACATGGAAACAGTATTTTTCCATAGCTAAGATATAACTATGACAATGGTCACCAGCACCAACCGTATGAAAACGCTTCAAGAGAGTAATCTTTTTGAGCTACAATACTGCGTATTGTATTTTCAAATTAAACTAATGATATTAACAATGGCTTCATAGATCAATTGGAAAAAAAAAACAATGATTTCATAGGCTGGTCGGATCAACTTGGTCCACTGTTCATTCAAATAATGGTTCCACAGTTTCAAGACACTTCTTAATAGGCATGGTGCAATGAGATTACATTTGTTGATTCTATTCCAAGCCACCTCCTGTTCTGACACTGACTACAACTTCTGCTTTCTGTCTCTGACTTTCACTCTGCTCTCCGACTGACTTCCACCTTGCTCTCATTCTAGCCAGAGATCTGCTCCTGAGTCCTGAGTCCAATCTTCATGTTCGCTTTTCCCCTGGGCCTATAAAAACATCCCTATGGGGAAAGTCAATCCTCATTGTATGCTGACATGTTTAGCGGTAGCCTGACTATTATTGTGAGGCTGTTGGCTTATTATACTCCATGCATGTTTAACCCCACTTTTTACACAACATAAGTTTTATGCTTCCTTAGCACATAACTTTCAGGATTGTATGTGCATCAGTCTATTAGTGATTTTATTTATTATTTCAGGTCAACAAGAGAACACTAGGCAGCGAACCAGCAGCAAGACTACTGAATAAACTAAAACCGCCATACTGGTTTTCAGCTCATCTTCATTGTAAGTTTCCAGCTGTTATCCAACATGGAGAGGGTGGGCCTACAACTAAGTTTCTTGCACTTGATAAATGTCTTCCTCGGCGGGGCTTTCTCCAGGTGCCCTTTATTACCTGATTCAGGATTATTTCTTATCCTTGTAATTAAATTTTGCATTTTGCTGTACACATTTGTTTCTGAGGGCTTGCCAATCCATTTTAGGTAATAGACATTCCATCCGGTCCAGGACCACATGAGATCCAGTATGATGAAGAATGGCTTGCAATAACACGGAAATTCAACAATGTTTTCCCCTTAACTCGGATGCCATTTACAATGCTGTCAGTGCTTAACTGCATATAACGTCTTTGCTCGTTAGCATGCAAACAGAGTTCTGAAAATATTTTTTTAAAAAAAATAAATCCAGAGTTTTTCAATTGTCTTGTTTTACAGGGATGAACAGGTTGACACTCAAGATGACTTGCAATGGGTTAGGAACAAGTTAAATGCCAGAGGGGCTAAACCTATTGATTTTGTCCAGACTGCTGCATCTTATGATCCTTCTTGTCAAGCATCCAATCCCTCCATAACAGGTGAGCTTTGATATTCACATTCTAACTTCAGAAATATGCCACTTCTCTCAAAAGGAGTTTGTAGGTCAAATTGAGCATTACTCCATTAGTTTTGTGTTACATTGCAGTTCATTTCATTCATTCAGTTGCTTTTGTAGAGAACGTTGTAAACTACTAGAACAACAATTCCAACCATTTGCTAGCAGTCTATCTGATTACTCTTAAAAAAAGGGTTTTTACTTTCTTTCTTTTTTTTTGCAAGGAAAACATGTTTTACTTAAACCTGACCCAACTTGGATTCACATTTCTTGTCGATCTTCTGAATGTGTTTTAAGCTGTTCTCCTGTGTTACACAGTTCATTGTAGGAATCCACAAACTGAGTCTTTTCTGCAGCTTCTAAATCTCCCGTATCTTCTGGACTCATCAAATTCTTATGGTATGTAATTTTTCTAATAAATGCTTATGGTTATACTTGACTATCATTTCTGCTTATATACAACTCTGGATTTGGTAAGCGTGGAGCCTAGAACTGGCAAAACTTTGGCTATGGTGTATGTACAATGGTTGGTTCAGCAGGGTTTAAGCTAGTTATGTTTTTATATGAATTATGAATATTTCTTTAAGCAGACAATCGATACTCTGACTTATCCTTACTCAAACATAATTGTTCTGTTATTGATTATACATTGGTTATACTTAGCGAAAAATATGATATATACCACCCAAATCTTTCTCATATATATGCTTAGTGGTAGTTCCTGAGCATTCAACCTTTTGTTGACAGGGGTTAGTAGAAATGAGTCAAGCTCCCAGACAGGACAAGCACTTGATAGTGACGACATAGAGCTCCCTGACGATGAAGATGATCCGGCGGACGATGATGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013490

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013490&oldid=58313"