BGIOSGA013495

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Revision as of 10:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013495| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013495, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013495

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013495, complete gene.

LocusTag

OSJNBA0013A09.13

Ensembl Transcript ID

BGIOSGA013495-TA

Ensembl Protein ID

BGIOSGA013495-PA

Length

5707

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33794559..33800265

Sequence Coding Region

33794559..33794770,33797042..33797123,33797263..33797295,33797403..33797523,33798178..33798270
,33799059..33799166,33799254..33799430,33799537..33799592,33799671..33799755
,33800159..33800265

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33794559..33800265 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33794559..33800265 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTCGGGTGGGCGCGTGGGGGGTGGAGAAGGGGAAGCGGGGGAGGCGGCGGAGGTGGCGGTGGCGATGGTGGATAATGAGGAGGAGGTGGCGCAGGCGCAGGCGCCACCCGCGGCGGCGGTGGCGGCGAGGGAGCTGGTGGTGGGGTACGCGCTGACGTCGAAGAAGGCCAAGAGCTTCCTCCAGCCCAAGCTCCGCGGACTCGCCAGGAAGAAAGGGATCCTTTTTGTTGCTATTGATCAAAAACGTCCACTGTCAGATCAAGGACCTTTTGACATTGTTCTGCATAAGTTGACAGGAAGGGAGTGGCAACAATTATTGGAGGAATATAGGGAGGAACACCCAGAAGTTACTGTTCTTGACCCACCAGGTGCCATAGAACATCTGCTTAATCGTCAATCTATGCTTCAAGAGGTTTCTGAATTGGACCTCTCAGATTGTCATGGTAGAGTCGGTGTTCCTAAGCAGCTGTTTGTTAATACAGATCCATCATCAATACCAGCTGCTGTTATGAGGGCTGGTCTATCTCTTCCATTAGTGGCAAAGCCTCTGGTGGCAAAATCCCATGAGTTATCTCTTGCTTATGATCCAATCTCCTTGACGAAGCTTGAGCCTCCGCTTGTTCTTCAGGAATTTGTAAACCATGGTGGTGTCTTGTTTAAGGTCTACATTGTTGGGGATGCGATACGGGTTGTGCGTAGGTTTTCGCTTCCCAACGTTGATGTAGGTGATTTATCAAACAATGCTGGAGTATTTCGGTTTCCAAGGGTCTCTTGTGCTTCAGCCAACGCAGATGATGCAGATCTGGACCCCCATGTTGCTGAACTTCCTCCAAGACCACTTCTCGAGATATTGGCAAGAGAGCTGCGCCGACGATTGGGTCTTAGATTGTTTAACATTGATATGATTAGAGAGCATGGGACAAGAGATCGGTTCTATGTCATAGACATGAACTATTTTCCTGGGTATGGTAAAATGCCTGGATATGAACATGTATTCACCGACTTTCTGCTGAGTCTAGTTCAAAAGGAGTACAAACGGCGACCAAGCTATAGCTCATGCGAGGGGTGA</cdnaseq>

Protein Sequence

<aaseq>MVSGGRVGGGEGEAGEAAEVAVAMVDNEEEVAQAQAPPAAAVAARELVVGYALTSKKAKSFLQPKLRGLARKKGILFVAIDQKRPLSDQGPFDIVLHKLTGREWQQLLEEYREEHPEVTVLDPPGAIEHLLNRQSMLQEVSELDLSDCHGRVGVPKQLFVNTDPSSIPAAVMRAGLSLPLVAKPLVAKSHELSLAYDPISLTKLEPPLVLQEFVNHGGVLFKVYIVGDAIRVVRRFSLPNVDVGDLSNNAGVFRFPRVSCASANADDADLDPHVAELPPRPLLEILARELRRRLGLRLFNIDMIREHGTRDRFYVIDMNYFPGYGKMPGYEHVFTDFLLSLVQKEYKRRPSYSSCEG</aaseq>

Gene Sequence

<dnaseqindica>1..212#2484..2565#2705..2737#2845..2965#3620..3712#4501..4608#4696..4872#4979..5034#5113..5197#5601..5707#ATGGTGTCGGGTGGGCGCGTGGGGGGTGGAGAAGGGGAAGCGGGGGAGGCGGCGGAGGTGGCGGTGGCGATGGTGGATAATGAGGAGGAGGTGGCGCAGGCGCAGGCGCCACCCGCGGCGGCGGTGGCGGCGAGGGAGCTGGTGGTGGGGTACGCGCTGACGTCGAAGAAGGCCAAGAGCTTCCTCCAGCCCAAGCTCCGCGGACTCGCCAGGTAGGTACTAGCAGATTTGTTCGCTTCACGTTTCCGTCTTGGGATGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAATTTGGGTGGGAAGAAGGCGCTTCTTGTTTGGGATATTTTTGTGTGTGTGTGTGGGTGCATTGGGGGAGGGAGGGAGGAGGCGTTTGGTGTGGCTGTCCTTTCTGTTTGTTTGTTTGTTTGAAACTTTGAATTGGATGGAATCCTCTCCATTTTTCCCCTTTGGATTCGAGAGATCAGAGCTGATTCTGGATCCTTCTTGCTGGCTGTATTGTGAGGAGGAAGAGGAGAGGTTTGCCGAGCGTAGTAGTAAATAGTTCGTTCGCTGTCGCTGATACCTCGTTCATTGACCTCTGTGCTGTGCTTGACTTGAGTAGATTCTGACACATATTGTCCTCCTCTCTCTTTTTTTTTCTCTCTAGTTAGTGATGAAAATGACTTACTTACTTTCCACTGTTTCTGCACTATTGTTTGTGAGCTAAAGATTAGCATGGGTGTTGTGCCAAATTAAAAATGGGTGTCACTTTGCGGTTTTAAAAGGTCTTAAAAGTGGGAGGAAAGGTGGGGGCTTTTCTTTGCGAAAATTAGATAGTGCAAAAGATGGTGAAAGGTGTGGCCTTTTCGGCATTGGAACGTCTGACTGAATATCTCCTTGTGATATGATCTGATCCATCATTTCTCGTGTGAAGGTGGGAGGCGTTGTTGCCAACGTTTCCAATAACGATCGAGCAATTTTTAGAGAATCATAGAACATATATATTCAATGGAAGGGAAGGAATTGGAGTTGCTTAGTTTTCTAGAATCACCCCCTGCACTGACTGACTTAATTACTTAAATAATAGCAGGTCCATATCATTCAAGCACACCTTTGTATTGCACCTATTTTCTTTTGGGATAAGAAAGTGACATCGATGCATTCCCTACTGTGTGGTAGTATTATATTCGCTCCCGATAGGAACCCTCTCTTAACTTATCTAGTAATTTAGTCATATTCCTGAACTTATCCTGCAAGTGTAGAAGTAACATGCACATTCTTTATCTTGAAATTTCTCAAAACTTTGCTGTGCATGATTATATACTTGTGTGTTTTGTTTGACTGCTTTCATTATTGACTGTGGGACCATGCTTTGGGATCGAGTGTACATAGAGATCCATTAGTCCATCAATTTTACATGCATGATTATTATGGCAATGCAAATTTTTTTTACCTACAATTTGTGTAATCTTCTGGATGCAATTTTTGTTTATGTCTGGAGTTTCACCTTACAGTTTCATAATACATTTTTGCACACGCATCACTAGGACCAGGACAGGGCGTGGAATGACGGCCTGGCAGGCACGATAAGATTGTGGAATAATTTAGGACCCACACAATAAACATTTGCATTGTCTTTTGTGTTTGATGTGGTCCACATGCATCTTGCAAATCAAGTACCATATCTCCATCCAGTCTGAGAAAGATGGTGCTTGATTAAAGCTATTCCTTTACCTGATTAGATTTTTATCTTTGATGCCACCTGGTGATTACTATTGTCTTTATGTCGTGACATTTCCATACAAGGCATGGATTAAGAACAACCTACCCTTAGTTCCTTGTACCCCTATAGTCACCAGGAAATTTGGATTTGCCCCATTCTCCCACCATGTGCATGCCAGGTCTCTAGTTTGCACAAGGGTACCTTGCAATTGTTTGAACATATGTTGTGTGTGCCTGTGTCCATTATCTGTTCTTTTTAGCTAAACAATGAATTGGAAGTTTGAATATGTCCGTATTCTTTTTTTAGAGAATATGCAGGACTGCCTATCTTTGCATTAAGGAAGAAGGATTTGTTCGTATTCAAATTGTTCATTCTTTTTTATATAGAAACAAATGCCCTGCAATGTCCACCTACATGATCTACTTAGATGAGGTTTATCAGTTTCATCTACTTCTCCTTATACTTTGTAGACATTTATTTCAAGCTCTTATGCCTATTAAAATTGTATGGAACCTTGAAAACAAGACTTCAAGAGGTTGAGAACTTAATAGCATGCAACTATTGCAGATAGGAACAATGATCTTAAATTGATTTGAATTATGAATAGCATGTTGTCAATGAGATGTTGAAGCTATATGTTGACTAGCTGCCAATTTCTCCTATTTGCAACTGTCGCAGACCTACTTATTTTATGTTTTGTTTGTGGACTATATTTTGCATGTTTATCTGTATTATTGGCAATTCGATATCTAAGCCTTCTGAAACATATTTGCAGGAAGAAAGGGATCCTTTTTGTTGCTATTGATCAAAAACGTCCACTGTCAGATCAAGGACCTTTTGACATTGTTCTGCATAAGGTTTGATAATATTCGATGTATTTAATACCTTGATGTATTATATGTCTGGATGCTGTTAAGTATTTGGAAAATAGGTTGCTTTTCTTAGCTTGTCTTTCATTTCATTGAAAACTGAACGATAACCTTGTATTCTCTACAGTTGACAGGAAGGGAGTGGCAACAATTATTGGAGGTCAGTAATCCAAAACATGTTAAAATCACTGTCAGACTTCTTTTTATGGGAATTTACATATTATCTGTTCCTTACTAATCTTTTATTGACTATGCCTCATTTGGTAGGAATATAGGGAGGAACACCCAGAAGTTACTGTTCTTGACCCACCAGGTGCCATAGAACATCTGCTTAATCGTCAATCTATGCTTCAAGAGGTTTCTGAATTGGACCTCTCAGATTGTCATGGTAATTTCTATAAATGGCTTCTTGGTTCTGGTTTGGAAGAAAACAATATGCTATATAAAACAAAATAATTTGCAATATTAAGTGGACAACTGCAGTTTTTTTACACGATTAGAATAAGTTCAAAGCAACCGGCATTAGTTTTTCCTTGATTAGAAACATACCATGAAAAGAAGGGGGTAGACTACCTTTTGCTATGATAATGCAACAGTTTGTTTGGCTCTACTGGTTAAAAATAAAGTTAACTTGGGAATAGTCTCATATGGAGTCTTTACATGTTTGTCTAATTAGGTATGGATGAAGCATTTGATGTTCTATGTGACTGTCATCTGTAGTATAAAGCATTGATTTCTCTTCTGTTTTTTGTATCCTTGGTGGACTAGTACCTTTTAATTCTTTTGTTACATGAACTGGCATAGTTCTCACTGCTGGGCCCTTTGGATTGGAGTAGTATTATATATATAACATTTTTTCCAGTAGCAGACATTGTTCTAATTGTTAGACTTCATGTCTTTACACATTTAAATATATTAAACCTTGTTATTTGCTTCCATCTCAGATTTCCTCCATTGTTTGGGAGACTTGATATGGAGAATTTGGTTCTTAGAACCATCCCAAAGGCTGATTTCCTCATTATGGTGCAGTTGCTTTTTGCAGGTAGAGTCGGTGTTCCTAAGCAGCTGTTTGTTAATACAGATCCATCATCAATACCAGCTGCTGTTATGAGGGCTGGTCTATCTCTTCCATTAGGTGAGTTTGCTTATCTGTTGATTCACAATTATTGTTTCCTCTTACGCATGCTCATAATAATTATTGGTTTGTTCCTGAGTTGTATATAACAGCTTTACATTTTTAAGTTACAATTTGACGTTCTATGCAGATAGGAGCAAAACATTATAGTTAGTTGCAATCATTTTTTTGTAGTCATCATAAGTGGTATGGTCTCTCACTCAGCATGATACGGGACTATGTTTACTTCAAAAGAAAATCTCACCAAAACCATAACTCGCTGATGAATATGTATGTTTCTTCTCTCTTTCCTTCCTAGATTCTTGAACATGCTGGAGCAAGTTTGTAACTTCTACCATCATTTTGCTTCCATTTGTTATCTGGTTTATGTAGTATGTATATCAGATGGGTAGGAAGCTGGTGAGAGATCAGCATATTATATACAATGGAAATCTGTATGGTGAACTATATAGACAAAACTAGGAAGATTCAACAAAAATATTCAAATAATTTGAACATAGTGAGGAAGGAAGATTAAGGTCTGTGTGTAACAAAGTTTCCATTGTTCTGCTTGTGTATTCTCATTTAAAGGTCTTACTAGAATCTTATGTACGTGGTACAACGCTGGCACTTGGTTCTGGATGAGATAGAGTCATCAACATCTCCATTGTATAAAAATGGGAAATGGTGACATAGAGTTTAATAAAATCTACGCATACTATGTTCAACTAATTACATTTGCTGAATTATGTTTTGGGGTTCCTAGCTGTTATTGTTGTCCATTTGTTAACTACATATATTATATGCAGTGGCAAAGCCTCTGGTGGCAAAATCCCATGAGTTATCTCTTGCTTATGATCCAATCTCCTTGACGAAGCTTGAGCCTCCGCTTGTTCTTCAGGAATTTGTAAACCATGGTAAGTTTCTTTGAGTTATTTTCCCCCCTCTGTTTCTATTCACTATTCCCAATCAATCCCAGATTAACTTGGTTTTCTCGTTTGTAGGTGGTGTCTTGTTTAAGGTCTACATTGTTGGGGATGCGATACGGGTTGTGCGTAGGTTTTCGCTTCCCAACGTTGATGTAGGTGATTTATCAAACAATGCTGGAGTATTTCGGTTTCCAAGGGTCTCTTGTGCTTCAGCCAACGCAGATGATGCAGATCTGGACCCCCATGTTGCTGGTAAACTTCCATACATTGGTTTCCATAGCTTTACGCTTATTGATGTCATTCATTGTTGGCTCTAGAAAATAGTATTGCCAACTAATGTTCTTCCATATTCCCTCAGAACTTCCTCCAAGACCACTTCTCGAGATATTGGCAAGAGAGCTGCGCCGACGATTGGTACTAATGATCCTTTGACTTGTGTGTTATTATGCTTAATTAATGTCATGTTGATTAACCCTTTTACCTAACTTACAGGGTCTTAGATTGTTTAACATTGATATGATTAGAGAGCATGGGACAAGAGATCGGTTCTATGTCATAGACATGAACTATTTTCCTGGTATGTGATCTAATATGTTTCAAGTATGTCTAATTTATCCCCGCAAAAAAAAGTATGTCTAATTTATCTTCTCATTATTTTCAGCTAACTTGACCCGGCAAAAAAATTTCAGCTAACTTAATGTTTATGGGTTTGAATTAGCAAACGATTTCCCTCCTATATCGTCGAAAATTTCTTTTTTGTTATGCTGCTAGGTAAAAGTCTAAATTAATACACTACTGTAGAAGTTGTGGCACCCACTTGAAATGTCCTCTCTTCCGTATGGCAGCTCTCAATAAAATCGGGAAACAACATGATGGCAGTCGATTATTATACTGAACTCTTTACAGAAGTGGCCTTCCTTTGCTAAATGGATAGTTCTTATCTCAATTGTGAAAGATGCTCATCACCTCTTATCCTGCAGGGTATGGTAAAATGCCTGGATATGAACATGTATTCACCGACTTTCTGCTGAGTCTAGTTCAAAAGGAGTACAAACGGCGACCAAGCTATAGCTCATGCGAGGGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013495

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