Os12g0497300

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0497300| Description = Similar to DNA repair protein RAD51 homolog| Version = NM_001073338.1 GI:115488637 GeneID:4352257| Length = 2921 bp|...")
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Gene Name

Os12g0497300

Description

Similar to DNA repair protein RAD51 homolog

Version

NM_001073338.1 GI:115488637 GeneID:4352257

Length

2921 bp

Definition

Oryza sativa Japonica Group Os12g0497300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19020845..19023765

Sequence Coding Region

19020845..19020940,19021553..19021695,19021801..19021913,19022028..19022119,19022306..19022400
,19022474..19022585,19022768..19022899,19023084..19023202,19023365..19023488

Expression

GEO Profiles:Os12g0497300

Genome Context

<gbrowseImage1> name=NC_008405:19020845..19023765 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19020845..19023765 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgtcgggtgcggctgcggcggcggcggcgacggcggaggaggcggcggcgggcggggagcacgggccgttccccatcgagcagctccaggcatctggtatagctgcacttgatgtgaaaaagctcaaagatgctggtctctgcacggtggagtctgtggtctactcaccaaggaaagaccttctgcaaattaaagggattagtgaagccaaagtcgataagataattgaaggagcttcgaagctggttccactgggatttacaagtgccagccaacttcatgcacagagacttgagattatccaagttacaactggatcaagggaacttgataaaatcttggatggtggaatagaaactgggtccattacagagatatatggtgaatttcgctcagggaagactcagttgtgccacactctgtgtgttacatgtcagctcccattggaccaaggtggtggtgagggaaaagctttgtatattgatgcagagggcacattcagaccacaaagactcctccagatagcagacaggtttgggttgaatggtgctgatgtacttgagaatgtagcttatgcaagagcatataatactgatcatcaatcaagacttttactggaagcagcttccatgatggtggagacaaggtttgctattatgattgtagatagtgcaacagccttatacagaacagatttctctggtagaggggagctgtcagcaaggcaaatgcacctggccaagtttcttaggagccttcagaagttagcggatgagtttggcgtggcggtggtaatcacgaatcaagttgtggcgcaagtggatggtgctgcaatgtttgggccacagatcaaacctatcggcgggaacatcatggctcatgcttccacaacaaggctttttcttcgaaagggaagagcggaggagcggatatgtaaggtagtaagctctccctgtcttgctgaagctgaggcgaggtttcagatatcaccggaaggcgtcacagatgttaaggactga</cdnaseq>

Protein Sequence

<aaseq>MSSSGAAAAAAATAEEAAAGGEHGPFPIEQLQASGIAALDVKKL KDAGLCTVESVVYSPRKDLLQIKGISEAKVDKIIEGASKLVPLGFTSASQLHAQRLEI IQVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKA LYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETR FAIMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQV DGAAMFGPQIKPIGGNIMAHASTTRLFLRKGRAEERICKVVSSPCLAEAEARFQISPE GVTDVKD</aaseq>

Gene Sequence

<dnaseqindica>1..96#709..851#957..1069#1184..1275#1462..1556#1630..1741#1924..2055#2240..2358#2521..2644#atgtcgtcgtcgggtgcggctgcggcggcggcggcgacggcggaggaggcggcggcgggcggggagcacgggccgttccccatcgagcagctccaggtgcggtccggttctctctccgcctccctccgtcctctcgatccgctcctacctacccgcttcttgattttctcttctgcgcttggtttgatgggttcttgatgatttagccgtcaaaccctaggttcttgatgctattctgcagtgggggtggcgtagatttcgagagattggtcgatgttttgatcgatttggtgttgcattgtgctggggttttcctcccaattttgggaattcccctttctgtgttcttggtccgtcgaagtaaaccctcatttcttgactgccgcgtgcgtgaaatgattgaagatacaccgttatcttgtatgaatttatgcagatatgaggaacctgtgattcatcggtgagctgtagcatttctgtaatattattgactaaatgagagaattaacgcatcctttgaagcagtttagttactaagatgataaaactcttagctgatagactgctatttccctgagaaaagagggttgtgcggttacctttttctttctgataaaatcagaatacggattagaaaatcttcatgttcaggtaaacactgtagagctgaattgtaaatgaaattttcttgtgaactttgctgtgaaggcatctggtatagctgcacttgatgtgaaaaagctcaaagatgctggtctctgcacggtggagtctgtggtctactcaccaaggaaagaccttctgcaaattaaagggattagtgaagccaaagtcgataagataattgaaggaggcaagtaattgttcgtaaattgaagggaacacagtaatgcatttcttcttgcatcagaacaatcttttatatgtgaagtactaagtgttcacaaatgtctggcagcttcgaagctggttccactgggatttacaagtgccagccaacttcatgcacagagacttgagattatccaagttacaactggatcaagggaacttgataaaatcttggatggtagcctcttggtgccttcatttattacagagtatctgacagcaccaaactcattgttatgatgtaatgtgatttagaaacacgcagtgtaattttgttttcattattcaacaggtggaatagaaactgggtccattacagagatatatggtgaatttcgctcagggaagactcagttgtgccacactctgtgtgttacatgtcaggtaccactacttcattcgttgcgactatcaaaacagtcatgctcatcgtttgatgaaaagaatgcctaagttcttttttacttaaccgttagatttatatactgttgactgcattgggcacctttctctcatttcttgtctattccacttcaaactttacaaattcattagtgatttatattgcagctcccattggaccaaggtggtggtgagggaaaagctttgtatattgatgcagagggcacattcagaccacaaagactcctccagatagcagacaggtagtcatggatattatgttacatatgttgtgctaaagattgacctgctaaacaagataattctaaacttcaggtttgggttgaatggtgctgatgtacttgagaatgtagcttatgcaagagcatataatactgatcatcaatcaagacttttactggaagcagcttccatgatggtggagacaaggcaagttcattcttttacaaattaacctatgttctctgaaatatatagtttaatagtgagaacagctaaagctatagtatatttgatttaattatgtactccagttcgaatccatgcatgtaatattggctatcaagtcccctaggccccagtctctctgaactggatgcatatttttgcaggtttgctattatgattgtagatagtgcaacagccttatacagaacagatttctctggtagaggggagctgtcagcaaggcaaatgcacctggccaagtttcttaggagccttcagaagttagcggatgaggtacattagtatgtgttgacaaaatcatggaatatatgttatttagctatttattgactttgatacatttatcatgccaaatgacaaaactagtgtttcaaggtagcttcttgctaattaatttgcaggatattactctcttacatgttcaccatactgattcagtttgatttgcttgctctagtttggcgtggcggtggtaatcacgaatcaagttgtggcgcaagtggatggtgctgcaatgtttgggccacagatcaaacctatcggcgggaacatcatggctcatgcttccacaacaaggtgctttatcaaggaaatcagacatctctctgccatgcctcagttcaattcctcatatttttctctacaacatcaaattcaaatttctgccggagtgccagtgcttctgttcaattcctcatatttttctctataacatgtttgatggtgcatatgtatcaggctttttcttcgaaagggaagagcggaggagcggatatgtaaggtagtaagctctccctgtcttgctgaagctgaggcgaggtttcagatatcaccggaaggcgtcacagatgttaaggactgaaaatcccaaaaatcgccttcaggatacagcatgagtttgcagtctatctacagcctgctgtttgcaatcccagtgtggtggacgcttggattgatgtaggccatcctgttcaaccaccacctgcgatagcgccctggaatcctggatggaagtacccatggtttcttcattgacattgctcttgtgtttcagcgggggtgtacagcaagtcgccacaattttggcttggcaccagcgatgttgttgttcactgttgatgttagacgagccagaatta</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0497300, RefSeq:Os12g0497300