BGIOSGA013523

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Revision as of 10:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013523| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013523, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA013523

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013523, complete gene.

LocusTag

OSJNBB0016H12.29

Ensembl Transcript ID

BGIOSGA013523-TA

Ensembl Protein ID

BGIOSGA013523-PA

Length

3167

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34475032..34478198

Sequence Coding Region

34475032..34475049,34475125..34475327,34475440..34475501,34475642..34475722,34475837..34475910
,34475993..34476075,34476490..34476593,34476972..34477111,34477182..34477229
,34477385..34477437,34477624..34477708,34477792..34477858,34477942..34478052
,34478146..34478198

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34475032..34478198 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34475032..34478198 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAGGAGGAAGCGGCGTCGGAGGCCGAGTATTCGTGGCCTCTGCTCCGGTTCGACCTCCCGCCCCGCCGCCTCTACCACTTCGCTGGCCAGTTCCGCTCCGCCGCCGCCGCCGCCTCCGCCTCCGCGGGCAACTTCCTCAAGGGCGTGAAGTGGTCGCCTGACGGGTCCTCCTTCCTCACCAGCTGCGACGACAACTCCCTCCGCCTCTTCTACCTGCCGGAGGAAGCGTACAGTACCGAGGCCGAGCACCCTGCTGAGGCCGCTGTTGGAGGTGAAGATTCCTATGGTGCAAGCATCCAAGTGAACGAGGGTGAGCCTGTATATGACTTCTGCTGGTACCCCTACATGTCTGTATCTGATCCTGCTACGTGTGTATTTGCGACGACCAGTCGTGATCATCCAATACACCTCTGGGACGCTACCACTGGGGAGCTTCGGTGTACTTACAGAGCGTATGATGCCATGGACGAGATAACGGCTGCACTTTCTATATCCTTCAATTCTACTGGTACTAAGCTCTTTGCTGGGTACAACAAAGCAATTAGAGTGTTTGATGTTCACCGCCCTGGTAGAGATTTTGAGCAGCATTCTTTGCTTAAAGGATGTGAAGGGCCGACTGGTATAATATCTTCAATTTCATTCTCTCCTCACAACGGGATGCTTGCTGTTGGTTCATACAGCCAGACAACAGCTGTGTATGCAGAGAGTAACATGGAGCCTTTATATGTTTTACATGGCCAGCTTGGTGGTGTCACACAGGTACTCTTTTCAAAAGATGGAAACTATTTGTATACTGGAGGGCGCAAGGATCCATACATACTATGTTGGGATATCCGCAACACTGTGGACATTGTTTACAAGCTGTACAGGTCGTCTGATACTACTAATCAAAGGATACATTTTGATATTGAGCCTTGTGGCAGGCATCTTGCCACTGGCGGGCAGGATGGCATGGTACACATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGCTGATACCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATCTTCTGGGCACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGATGAGAACTGCTGCTCGGTCTGGAAATTTTCTTCCTTGCAAGAAGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MEEEEAASEAEYSWPLLRFDLPPRRLYHFAGQFRSAAAAASASAGNFLKGVKWSPDGSSFLTSCDDNSLRLFYLPEEAYSTEAEHPAEAAVGGEDSYGASIQVNEGEPVYDFCWYPYMSVSDPATCVFATTSRDHPIHLWDATTGELRCTYRAYDAMDEITAALSISFNSTGTKLFAGYNKAIRVFDVHRPGRDFEQHSLLKGCEGPTGIISSISFSPHNGMLAVGSYSQTTAVYAESNMEPLYVLHGQLGGVTQVLFSKDGNYLYTGGRKDPYILCWDIRNTVDIVYKLYRSSDTTNQRIHFDIEPCGRHLATGGQDGMVHIYDLQGGQWVTAFQAAADTVNGFAFHPYLPLATTSSGHRRFGMEDEIEEELSLAGDENCCSVWKFSSLQEA</aaseq>

Gene Sequence

<dnaseqindica>1..18#94..296#409..470#611..691#806..879#962..1044#1459..1562#1941..2080#2151..2198#2354..2406#2593..2677#2761..2827#2911..3021#3115..3167#ATGGAGGAGGAGGAAGCGGCGCCGGAGTGTACGGACGCCATGGGGAGCGAGGCGGCGGCGGGGGATGTGGCTGAGACTGAGGAGGTGGTGGTGGCGTCGGAGGCCGAGTATTCGTGGCCTCTGCTCCGGTTCGACCTCCCGCCCCGCCGCCTCTACCACTTCGCTGGCCAGTTCCGCTCCGCCGCCGCCGCCGCCTCCGCCTCCGCGGGCAACTTCCTCAAGGGCGTGAAGTGGTCGCCTGACGGGTCCTCCTTCCTCACCAGCTGCGACGACAACTCCCTCCGCCTCTTCTACCTGTGCGTCGCCCCCCCTCTCGTCTTCTCGTGTCTTGTGGCTTCTCTCGCGGTGTTGAAGCAATGCACCGAACTGATCTTTTTTTTTTCTTTATGTTTCTGGGACAATGAGCAGGCCGGAGGAAGCGTACAGTACCGAGGCCGAGCACCCTGCTGAGGCCGCTGTTGGAGGTGAAGGTGCGTCTGGGATAAATGACTTTCTTTCTTTTTTTTCTTTAAACTAGTATAGTTATTTTGTTGTTGAATGTTTGCTAGATTTCAAGTTTTTGTTGGCGTAATTTAGGATGTATACTGTTGTTGATTTTTTTTTTCTGCAGATTCCTATGGTGCAAGCATCCAAGTGAACGAGGGTGAGCCTGTATATGACTTCTGCTGGTACCCCTACATGTCTGTATCTGGTGGGTGAATTGCTTCCTATGTACTGCTGTTTAGGATCATTTGTTATTTGTGATTGTTTGGTGAAATATGTGAATATGTGATGCTTGAATTTGGGGTTCTGTGTCACGTTGCAGATCCTGCTACGTGTGTATTTGCGACGACCAGTCGTGATCATCCAATACACCTCTGGGACGCTACCACTGGGGAGGTAGAATTGGCGGCTTGTGCTTGTTTCGTTTGGAGTTGATAATCAGTTATTCGTTTGAGATGATCTATTGTGAGAATTGCAGCTTCGGTGTACTTACAGAGCGTATGATGCCATGGACGAGATAACGGCTGCACTTTCTATATCCTTCAATTCTACTGGTACTAAGTATGTACAATGCACTCAACCTTCTTAACTGCATTTATATTGCATGAGTAAATTTGCTAGTGCATTTTTGTGGAACCATGAGATTCTACTCTCACCTAAGTGTGGGAAGTTGATTGTGTTTTACTGATATACTACCTCCATCCTTTGATATATGACGTTGGTTTGTTCACCAACGTCCTACATTAAAAGAACAGAGGGAGTATGATATTTGCTACGAATGTTTTTGGTTTGAACCAAAATCTTGTTGGTTCGAAAATAACATATACAATGTTTGTACTGAACTTACTGGGCTACATCTTAGACCATAGAGTCTACCTATATGTTAGCTACTAAAGTAGACCAATGGTCGTGCAACTACACTATAACATAATCTTCTTGGCTGTTATACTCAATGGAGGTATGATGTTTTTGTAGGCTCTTTGCTGGGTACAACAAAGCAATTAGAGTGTTTGATGTTCACCGCCCTGGTAGAGATTTTGAGCAGCATTCTTTGCTTAAAGGATGTGAAGGGCCGACTGGTAAGTGACAGTTTAAAACTTCCAATCTAAGTTTGATTTGCTTGTATACTTCATGGCAGCACATAATTTGTTATGGTTTGGGTAAAATTGGGATGCATAAATGGTTGTTTAATTGTAATCATTGTGTAACTTTGGAAATCTGTTACACTTGAAAGCACAATCATAATGTGTCTGCTAATTTGAAATGGGTACATTAGCTTAAAGCATGTTTATGCACACACTGAACATTTATGCACCAAAGTACCAAACTATTTTGGTGTTTAATCTTCTCAGATCACTAGGGTATTGATAAAGAAGGCCTTAAATGAATGCTTTTTTCTTTCTGGGTGAGAGGTGAAACAATCTTATACGCTGCTTAGCTCTTTGTTTGCTCCACAGGTATAATATCTTCAATTTCATTCTCTCCTCACAACGGGATGCTTGCTGTTGGTTCATACAGCCAGACAACAGCTGTGTATGCAGAGAGTAACATGGAGCCTTTATATGTTTTACATGGCCAGCTTGGTGGTGTCACACAGGTTCGTAAAGCAACCATACAAATTTACATCTTATTGTATAAACAGAAGATAACATTGATGGAAATTTTAGGTACTCTTTTCAAAAGATGGAAACTATTTGTATACTGGAGGGCGCAAGGTAACTAACACTCGTGTTCTTCTAACAATTGATCTTTTGAGACTGGCACTTCACAGTTCAATCCCTTTATGTTATGAGATTTATTTACCCAATTATTTTTAGCATCTGAAGATGCTTCTGAACTTTGTGAATTCATTTCTGTAATTTCTCCCTAGGATCCATACATACTATGTTGGGATATCCGCAACACTGTGGACATTGTTTACAAGTAAGCATTTTGTAATACACCTTCAAATTTATCATTTTTGTTTTGACGTCTCATTGTATTGTTAAGGCACATCTTGTGACTATTTCCTTAGTCATGGTAGTCCTTTTTTTAGAGTAAAGATCACTATATTGATAACGATCATGGTAGTCCTTCTCATTGCTTATTTTGGTGGGATCCCTTAATCAGGCTGTACAGGTCGTCTGATACTACTAATCAAAGGATACATTTTGATATTGAGCCTTGTGGCAGGCATCTTGCCACTGGCGGGCAGGTGCGCTCCTCTTGCCTCCCATCTTTCCATTGGGGTTATATTTTTGTACTAGCTCATCTTAAAACAGTCCCTTTTTTTGATAGGATGGCATGGTACACATTTATGACCTCCAAGGTGGTCAGTGGGTAACAGCCTTCCAAGCAGCAGCTGGTATGTGTTTCTGGTCTTCTGTTGCTAGAGGAGTTGATGTTTCTGTGGTACTCCCTTTGTGATACCTATCTGTTTAATCCTAGATACCGTAAATGGGTTCGCGTTTCATCCATACCTTCCTTTGGCTACAACATCTTCTGGGCACAGAAGATTTGGCATGGAGGATGAAATTGAAGAAGAGCTGAGCTTGGCTGGTGCGTGTTATATATACTTGCTGTTTTCTAAAATATGGTTGTGTTGCTTGAATGGTGAACGCTACACATTTTTCCCCCTTTCTGCACGCTTAGGTGATGAGAACTGCTGCTCGGTCTGGAAATTTTCTTCCTTGCAAGAAGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013523