BGIOSGA013531

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Revision as of 10:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013531| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013531, complete gene.| tag = OS03G07...")
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Gene Name

BGIOSGA013531

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013531, complete gene.

LocusTag

OS03G0740700

Ensembl Transcript ID

BGIOSGA013531-TA

Ensembl Protein ID

BGIOSGA013531-PA

Length

5046

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34600389..34605434

Sequence Coding Region

34600389..34600740,34600847..34601061,34602344..34602544,34602633..34603175,34603654..34603730
,34604301..34604652,34604806..34605018,34605108..34605434

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34600389..34605434 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34600389..34605434 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCTCCGGCGTCAAGTTTATCCCCCGGGAGCAGATCGGCGAGGATGCCCTAGGCGGCGCCGGCTCGGCGGGGTCCGACAGCTCCGAGGATAGGCGGCGGCGGAAGAAGCGGGGCAGGAAGGGGAGGGACAAGGAGGAGAGGCGGGACCGGAGGCGCCGGCGGAGGCGGAGCAAGTACGGCTCGGACTCCGAGGAGGGGTCCGATAGCGGAGACTCGATCGACGAGGAGGAGGAGAAGGGGTTGAGCCGGAGCAAGCACCGGAGGAAGCATCAGAGGCGGCGCCATGAGTTCTCCGATGACGACGATGATGATGACGAGGAGTCCAGTGGTGAATCTGATAAGAGAAGAGGCAGTCGCAAGAGCAAGCTTGGAGGTGCCGCAGGTGATGATGATGATGAGGAGGAGGAGGATGAGGGAATTGGAGGTGAGGAGTTGAGAGCTAGTGATATTGTCAGGAAGGAGATGGGCCTCGAATGGATGCTCAAGTCGGCAAGCAGTGGTCGGGCTGAGAGCAGCCAAGCTCGCGGGGCTGACAAAGATGAGGAGGAGGTTGCACCCGAGGAGGTGAAGAAAGCCAATCCAAAGGAATTGAATCCATACCTGAGGGATAATGGCAGTGGGTACCCTGATGAATCTAGCCCTTCAAATGCAGGCAACCAGTTGCTTGCTTCCTCTGTGGTTGGTGATGGAGGTGCTAGCTGGAGGCTCAAAGCTTTGAAGCGTGCAAAAGAGCAAGCAGCTCGTGAAGGAAAACAACTTGAGGAGGTTGTTGGTGAGAGATGGGGCTCGTTAGGCCACTTAGCTGCATCAGTGTCAGCATCTAGAGCTGCCCCTTCGCATGCTCATTTACATGCCATTAGAGGCAGAAAAGCTGGGCAAGCAGGCAGCTCAGAAGAACATTCCAAAGAAAATCCAAAGGAGGGTCAGCAAGGTGGAGACAGTGGTAGACGTGAATACTTAAAAGATGTTTCCTCTCGGCATCATGCAATGAGAAAACCTAAACCTGATTCTGTACCATGGAAAAGGAATAGGCAGAATATTTCTTCTGAGGATCAGGCACTTATCTCTTCAGCGATAGCAGGAATCAATAAGTTCTCTAATGATGGAAGCTTTTTGGAAAAGATTAATAATCTTGAAAGCAAGACTGTAAATGTTTTGACTGCAGAGGTTGATGAGCTCAAGTCTGATAAGGGTAGCTCAAAGAAAGCACCTTCAGTTAGCACTCAAAAGCTAAATGCGAACCAGTTAGCAGCAAAGATTCTGCACCTCCGAATGAAAGGCAAGCATGAAGAAGCTGAACAACTTTCGCGAGAAATGGAGGCGGTGCTGGAGAATGAGGATACTGCTGTTGAAGAACCTAGGCATGAAGTGAGGAGTTCAACCAGGAACACAATAAAGTCTAGTGCAGCTGATCGCAGGAAAAGAGAAGAGGATGCTGACCGGCATCTTGCAAATAAAATTATGCACAATAAACAGTACAACATGTCTAAAAGTATAGAGGATGAATATGATTTTGGTGATGCCCCCAGTAAGAAAGGCAAAAGGAGGAACAAAGATGCACATGAGGAGAGGAGAAGCACTCATAGGCTCACAACTCAGAAAGAGCGCTGTATGTATTGCTTCGAGAACCCATCACGGCCAAAGCATCTGGTTGTTGCTATAGGAAACTTCACTTACTTGATGCTGCCACAGCTTGAGCCTGTTGTCCCTGGGCACTGCATTATTCTGCCATTGCAGCATGAGTCTGCAACAAGAACAGTTGATAGAAGTGTCTGGGAGGAGATCCGCAACTTTAAGAAGTGCCTCCTGAAAATGTTCGCGCAGCAGGACAAGGATATTGTTTTCATGGAGACTGTTATAAGCTTGGCCAAACAACGCAGGCACTGCATGATTGAATGCATCCCTATCCCCTCCGAAGTTTCAAACAATGCTCCCATGTACTTCAAGAAGGCAATTGATGAAGCGGAAGAAGAATGGACCCAGCATGACATGAAGAAACTTATTCCAACAAAGGGAAACCTGCACCAAGTCATCCCAGAGAACTTTGCCTACTTTCATGTAGAGTTCGGGCTCGACCGTGGATTTGTCCATGTCATAGACGATGAGAGCAAATTCAGTGCAGGTTTTGGGTTGAATGTCATCAGAGGGATGCTCCAGTTGCGGGAAGAGGACATGCACAGGCGCCGAAGGCATGAATCGATGGATAATCAGAAACAAGCTGTTGCTAATTTCATGAAGGACTGGGAGCCCTTTGATTGGACCAAACAGCTTGATTAG</cdnaseq>

Protein Sequence

<aaseq>MLSGVKFIPREQIGEDALGGAGSAGSDSSEDRRRRKKRGRKGRDKEERRDRRRRRRRSKYGSDSEEGSDSGDSIDEEEEKGLSRSKHRRKHQRRRHEFSDDDDDDDEESSGESDKRRGSRKSKLGGAAGDDDDEEEEDEGIGGEELRASDIVRKEMGLEWMLKSASSGRAESSQARGADKDEEEVAPEEVKKANPKELNPYLRDNGSGYPDESSPSNAGNQLLASSVVGDGGASWRLKALKRAKEQAAREGKQLEEVVGERWGSLGHLAASVSASRAAPSHAHLHAIRGRKAGQAGSSEEHSKENPKEGQQGGDSGRREYLKDVSSRHHAMRKPKPDSVPWKRNRQNISSEDQALISSAIAGINKFSNDGSFLEKINNLESKTVNVLTAEVDELKSDKGSSKKAPSVSTQKLNANQLAAKILHLRMKGKHEEAEQLSREMEAVLENEDTAVEEPRHEVRSSTRNTIKSSAADRRKREEDADRHLANKIMHNKQYNMSKSIEDEYDFGDAPSKKGKRRNKDAHEERRSTHRLTTQKERCMYCFENPSRPKHLVVAIGNFTYLMLPQLEPVVPGHCIILPLQHESATRTVDRSVWEEIRNFKKCLLKMFAQQDKDIVFMETVISLAKQRRHCMIECIPIPSEVSNNAPMYFKKAIDEAEEEWTQHDMKKLIPTKGNLHQVIPENFAYFHVEFGLDRGFVHVIDDESKFSAGFGLNVIRGMLQLREEDMHRRRRHESMDNQKQAVANFMKDWEPFDWTKQLD</aaseq>

Gene Sequence

<dnaseqindica>1..352#459..673#1956..2156#2245..2787#3266..3342#3913..4264#4418..4630#4720..5046#ATGCTCTCCGGCGTCAAGTTTATCCCCCGGGAGCAGATCGGCGAGGATGCCCTAGGCGGCGCCGGCTCGGCGGGGTCCGACAGCTCCGAGGATAGGCGGCGGCGGAAGAAGCGGGGCAGGAAGGGGAGGGACAAGGAGGAGAGGCGGGACCGGAGGCGCCGGCGGAGGCGGAGCAAGTACGGCTCGGACTCCGAGGAGGGGTCCGATAGCGGAGACTCGATCGACGAGGAGGAGGAGAAGGGGTTGAGCCGGAGCAAGCACCGGAGGAAGCATCAGAGGCGGCGCCATGAGTTCTCCGATGACGACGATGATGATGACGAGGAGTCCAGTGGTGAATCTGATAAGAGAAGAGGCAAGTAGCCCTAACCTTGTTTAGGTTAGGTTAGGATGGTGCTTTTTGGTAGGATTTTTGTGAGTTGTGTTTCTGATCACCTGGTATTGCTGACCTCTTGTTACAGGCAGTCGCAAGAGCAAGCTTGGAGGTGCCGCAGGTGATGATGATGATGAGGAGGAGGAGGATGAGGGAATTGGAGGTGAGGAGTTGAGAGCTAGTGATATTGTCAGGAAGGAGATGGGCCTCGAATGGATGCTCAAGTCGGCAAGCAGTGGTCGGGCTGAGAGCAGCCAAGCTCGCGGGGCTGACAAAGATGAGGAGGAGGTTGCACCCGAGGAGGTAATGATTACCACATCTCATGTGAGATATGCTTATGGTTCAATGCTTGTGTCCTAGTAGCTACCTTTTGCCATATAATTGCAATTCAGGGTAGCTTATTGTAGTTCTTTGTGGAGCTGAGGCCATGTTTGTGATGGTAATATTTCCATAAGCTAGGTACTGCATTAATATTGTATATGATTCACCACTTGCAGTGAAGATGCCATGTTTTAATTGTTGGTAGCTGAACAGTAGTCTTCAGATGGTATTAGGCACTTGCATCCTATCTACTCAAATTATGAACAATATTCCCATGGTAGAATGCTATTCTGCTTATGGTTTTATGCTAAGCTATAGTAGCTGAAAGTTGGTTCAATGCTAAGCTTGTTGTGATCAATTCAGTGAGTGACCGTTGCTATTTAGTTATGATGTTCATACTTAGATTTAGATTTGGTTTCTTTCGTTAGCAATGACATTTAGTCAAGTAACTGCTGTATAATTTTCTTCATGACAATGGATGAGTATGTTTTGTCCTGTACGTTAACTCATATTTTAATAAACCCCTGGGACATTCAGTTGTTCAGTGCAGGAATACTATGGCTGTGTTTAGTTGGTGCGCCAAAATTTTTTTTGAAGTATACGGACACACATTTGAAGTATTAAACGTAGACTAATAACAAAACAAATTACAGATTCCGCATGTAAACTGCGAGACGAATCTATTAAGCCTAATTAATCCGTTATTAGCAAATGTTTACTGTAGTACCACATTATCAAATCATGGCGTAATTAGGCTCAAAAGATTCGTCTCGCAATTTACAGTCGGACTGTGCAATTGGTTTTTTTTTTGTCCACATTTGATGCTCCATGTATGTGTCCAAACATTTGATTTGACGGAAAAGTTAGAAGTTTGAAGAAAAAAGTTGGAATCTAAACACGGCCTATGGGTGTGTTCGGCACCCCCTTTTCCAAACCCCTCCTTCGTTTTCCACGCGCACGCTTTTCAAACTGCTAAACAGTGCTTTTTTTGCAAAAAAGTTTATATACAAAAGTTGCTTAAAAATCATATTGATCCATTTTTGAAAAAAAATTAGCAAATACTTAATTAATCACGTTCTAATGGGCTGCTCCGTTTTCCGTGCGTACTGTGCACGTTGGGAGCCGGCTGTAGCGAACACACCCTATATTTATATCTACAGATCTGTATAAGATGTATGGAATAAATGTTTTGTTTAGTGATTCTAAACTCTAAACTGGGATATCTCTCCTGCTTTGCTTACATCAACTTCTTGGGTACTGACAGGTGAAGAAAGCCAATCCAAAGGAATTGAATCCATACCTGAGGGATAATGGCAGTGGGTACCCTGATGAATCTAGCCCTTCAAATGCAGGCAACCAGTTGCTTGCTTCCTCTGTGGTTGGTGATGGAGGTGCTAGCTGGAGGCTCAAAGCTTTGAAGCGTGCAAAAGAGCAAGCAGCTCGTGAAGGAAAACAACTTGAGGAGGTATGTCCGTCGCCACATATTATTATTGGAAGTGACTGACATTAGGTAGTTTATTCCCCTAACTTCTTTTACTATTCAATTACTATAGGTTGTTGGTGAGAGATGGGGCTCGTTAGGCCACTTAGCTGCATCAGTGTCAGCATCTAGAGCTGCCCCTTCGCATGCTCATTTACATGCCATTAGAGGCAGAAAAGCTGGGCAAGCAGGCAGCTCAGAAGAACATTCCAAAGAAAATCCAAAGGAGGGTCAGCAAGGTGGAGACAGTGGTAGACGTGAATACTTAAAAGATGTTTCCTCTCGGCATCATGCAATGAGAAAACCTAAACCTGATTCTGTACCATGGAAAAGGAATAGGCAGAATATTTCTTCTGAGGATCAGGCACTTATCTCTTCAGCGATAGCAGGAATCAATAAGTTCTCTAATGATGGAAGCTTTTTGGAAAAGATTAATAATCTTGAAAGCAAGACTGTAAATGTTTTGACTGCAGAGGTTGATGAGCTCAAGTCTGATAAGGGTAGCTCAAAGAAAGCACCTTCAGTTAGCACTCAAAAGCTAAATGCGAACCAGTTAGCAGCAAAGATTCTGCACCTCCGAATGAAAGGCAAGCATGAAGAAGCTGAACAACTTTCGGTAAGTATTGCATTATTGTTATTGTGATAACATTAACAGGCTTACCTTCTTGATTCATTATTAGTGTATATAATTTGTTTGGAAAATAACTATACTTATTACAATATAGTAATGAAAGTGCAGTTTTGCACATGGTTTCATTTATTCATTTGAAGTAACAGAAAATACATGCTGTTCATTGTTTTTCAGTAATGGCTTAGACCCCTGAGCTAACATATTGCTATTGAATAATGGCTTTGACCCCTAATTTAACATACTCTTATAGTAGCATGTAACCATGGTCGGATCCGCATCAATCCATGCTCAAGAATTTGCACTATGTTTATCGCTTTATGATCAATATACAATTTAGGATGCCGAAGCACAATTTCTTTTATATCTGAAATAGGGCATGATTAAGAAATTGAATTTCCATATGCTTGAATATACTTGAATTAGAGGTGACAAGACTTTGTAACTGCTAACTATTCTTGCTCAGCGAGAAATGGAGGCGGTGCTGGAGAATGAGGATACTGCTGTTGAAGAACCTAGGCATGAAGTGAGGAGTTCAACCAGGTTAGTCCATGACGTTGTTATTCTGAGTTAGCACATTACAGATGCCTGCTTTCACACACTGTCATATGATGTCACTTTGTAAGGCTAAAAACTTGTAAACGCCTTAGTATTGGTACCTTGTTATTCTCCCACAATATCTGAGGACTAGAAAAGAAATATGTCTGCAACTGTAAAGCTATGCTGAAATGTTCTAACAGTAATCGTTCTCTCGTATTGAAATACTCTCAGTTTCATATTCTTAATGTCTAGTTTCTAGAGCATGTGCGTATGAGGCATAGTTGTATAGATAAGAAGGGGAATGGATACAGCATGCACTTGATCTGCTCCTCTGAAATATTTTGGTGGCCATATGTATGCCATTTTGGCATACTATGACAAAAAAAAAAAGTGCAAAACACAGGGTGCACCTGTTTTGCATAGGGATATTCAAATATTTTAATGTAGACATCCAATTTATTACAAACATGAGCATTACAGAAATGACCTTTCTATTTCAATGTTGTATCAGCATATATATACTCGTATTGTTTATCTGCTTGCTGAACAAACTATTGTTTTTCTAATCTGTAGGAACACAATAAAGTCTAGTGCAGCTGATCGCAGGAAAAGAGAAGAGGATGCTGACCGGCATCTTGCAAATAAAATTATGCACAATAAACAGTACAACATGTCTAAAAGTATAGAGGATGAATATGATTTTGGTGATGCCCCCAGTAAGAAAGGCAAAAGGAGGAACAAAGATGCACATGAGGAGAGGAGAAGCACTCATAGGCTCACAACTCAGAAAGAGCGCTGTATGTATTGCTTCGAGAACCCATCACGGCCAAAGCATCTGGTTGTTGCTATAGGAAACTTCACTTACTTGATGCTGCCACAGCTTGAGCCTGTTGTCCCTGGGCACTGCATTATTCTGCCATTGCAGGTGACAAAATCATTTTATGATGTGCTTTCATAACAACAAGCTAACTTCAGCTTCTTGTAATTTTGAATAGTCATATGTAAACCCGACATTCATTACAACTCTTATGCACTATTCATCATCTACCTTATGATATGTTCTTTTTTATGGTTGCAGCATGAGTCTGCAACAAGAACAGTTGATAGAAGTGTCTGGGAGGAGATCCGCAACTTTAAGAAGTGCCTCCTGAAAATGTTCGCGCAGCAGGACAAGGATATTGTTTTCATGGAGACTGTTATAAGCTTGGCCAAACAACGCAGGCACTGCATGATTGAATGCATCCCTATCCCCTCCGAAGTTTCAAACAATGCTCCCATGTACTTCAAGAAGGTCGGTTGTCTGTTGCTTTGTCCATGATTGAGAACAATTTATTTCTTATGTGCTTCAGGTTCTAACAAAATCCAACCTATTTACTTCAGGCAATTGATGAAGCGGAAGAAGAATGGACCCAGCATGACATGAAGAAACTTATTCCAACAAAGGGAAACCTGCACCAAGTCATCCCAGAGAACTTTGCCTACTTTCATGTAGAGTTCGGGCTCGACCGTGGATTTGTCCATGTCATAGACGATGAGAGCAAATTCAGTGCAGGTTTTGGGTTGAATGTCATCAGAGGGATGCTCCAGTTGCGGGAAGAGGACATGCACAGGCGCCGAAGGCATGAATCGATGGATAATCAGAAACAAGCTGTTGCTAATTTCATGAAGGACTGGGAGCCCTTTGATTGGACCAAACAGCTTGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013531