Os12g0498650

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0498650| Description = Protein kinase-like domain containing protein| Version = NM_001190033.1 GI:297729196 GeneID:9268090| Length = 2504 b...")
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Gene Name

Os12g0498650

Description

Protein kinase-like domain containing protein

Version

NM_001190033.1 GI:297729196 GeneID:9268090

Length

2504 bp

Definition

Oryza sativa Japonica Group Os12g0498650, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19073719..19076222

Sequence Coding Region

19073719..19075654,19075884..19076010,19076177..19076222

Expression

GEO Profiles:Os12g0498650

Genome Context

<gbrowseImage1> name=NC_008405:19073719..19076222 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19073719..19076222 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagttcaacaatctcactgggacacttcctccctgcgccggcaacaggctgccccgcctcaaggtgctcagtgtcgacagaaaccagctccatggtgccattccggtctctctctgcaattcctccaagctcgaagtgatccagatgatgaagaattccttctcaggagtcatcccggattgccttggagctcacctccagaacctgtgggaactgaccctggatgataaccagctagaagcaaattctgattccgattggagatttctggacagtctgacaaattgcagcaatctgaaggtaattggtctggctggaaacaagctgcgaggacttcttccgggctcgattgcgaacctttcgacgagcatggagttcttgagcatatacaacaacatgatacatgggcaaatacctcagggaattggcaaccttgtcaacctggactcgatttacatgcatctgaataaccttgctggcaccattcctgactcaattggcaagcttaagaagctgagtaacctgtacttgtatgacaacaacttgtcagggcaaattccagcaacaattggcaatcttaccatgctgagcagactatccctcaacgagaacatgctaactggctccataccatccagtcttggcaactgccctttggagacactggaactgcaaaacaatcgcctcactggtccaatacccaaagaagttctccagatatctactctctccacctctgccaatttccaaaggaacatgctaacaggatcattgccatcagaagttggtgacctgaaaaacctccaaactttggatgtatctggaaataggttaactggggaaattcctgcctctctcggcaattgtcaaatcttacaatattgcatcatgaaaggaaattttcttcaaggagaaattccatcctcaatcggacaattgaggggtctcttggttcttgatctatcaggaaacaacttgtctggttgcattccggacttactcagtaacatgaaaggtattgaacgcctggatatctccttcaataactttgagggtgaagttccaaaacgtggaatatttcttaatgccagtgccttttcggtcgaggggatcactggcttgtgtgggggtatccctgagctgaaattgccaccttgctcaaactacatcagtactaccaacaagcgattgcacaagcttgtcatggccatctccacagcctttgccattctgggtattgctttactgcttgcactatttgtattctttcgtcaaacaaggaattcaagaaagggagagcatgccttactgctcatcagtgatcagcatgtcagggtttcatatactgagttggtgacttcaacaaatggttttgcttctgagaacctcgtaggtgttggaagcttcggctctgtctacaagggaacaatgatgagcaatgaagaagaggtggttgtcgctgtgaaggtgctcaacctccagcagcgaggagcatcccaaagttttgttgcggaatgtgagactttgagatgtgctagacacaggaaccttgtgaaaattttgacggtgtgctcgagcattgattcgagaggtcttgatttcaaagccattgtatttgattttctaccaaatggaaacctacaccagtggctgcaccccagggaacatggcaaccaaactggacttagtcttatccagcggatcaacattgccattgatgtagcttcagcacttgaatatcttcaccaatatagaccagccccaatagttcattgcgattttaagccaagcaatattctccttgataatgacatggttgcccatgttggtgattttgggcttgcgagatttgttgatcatggtcaacatagcctcccagatatatcaagtggttgggctacaataaggggaaccattggatatgctgctccagagtatggactcggcaacaaagtctcgatctacggcgacacatacagcttcggagtactactgctggaaatcttcacaggaaaaaggccaacggatgctgatttcgcgcaagatctcagccttcacagattggaattcggtgttcggaggatgttccaacagatcgcctgctga</cdnaseq>

Protein Sequence

<aaseq>MQFNNLTGTLPPCAGNRLPRLKVLSVDRNQLHGAIPVSLCNSSK LEVIQMMKNSFSGVIPDCLGAHLQNLWELTLDDNQLEANSDSDWRFLDSLTNCSNLKV IGLAGNKLRGLLPGSIANLSTSMEFLSIYNNMIHGQIPQGIGNLVNLDSIYMHLNNLA GTIPDSIGKLKKLSNLYLYDNNLSGQIPATIGNLTMLSRLSLNENMLTGSIPSSLGNC PLETLELQNNRLTGPIPKEVLQISTLSTSANFQRNMLTGSLPSEVGDLKNLQTLDVSG NRLTGEIPASLGNCQILQYCIMKGNFLQGEIPSSIGQLRGLLVLDLSGNNLSGCIPDL LSNMKGIERLDISFNNFEGEVPKRGIFLNASAFSVEGITGLCGGIPELKLPPCSNYIS TTNKRLHKLVMAISTAFAILGIALLLALFVFFRQTRNSRKGEHALLLISDQHVRVSYT ELVTSTNGFASENLVGVGSFGSVYKGTMMSNEEEVVVAVKVLNLQQRGASQSFVAECE TLRCARHRNLVKILTVCSSIDSRGLDFKAIVFDFLPNGNLHQWLHPREHGNQTGLSLI QRINIAIDVASALEYLHQYRPAPIVHCDFKPSNILLDNDMVAHVGDFGLARFVDHGQH SLPDISSGWATIRGTIGYAAPEYGLGNKVSIYGDTYSFGVLLLEIFTGKRPTDADFAQ DLSLHRLEFGVRRMFQQIAC</aaseq>

Gene Sequence

<dnaseqindica>1..1936#2166..2292#2459..2504#atgcagttcaacaatctcactgggacacttcctccctgcgccggcaacaggctgccccgcctcaaggtgctcagtgtcgacagaaaccagctccatggtgccattccggtctctctctgcaattcctccaagctcgaagtgatccagatgatgaagaattccttctcaggagtcatcccggattgccttggagctcacctccagaacctgtgggaactgaccctggatgataaccagctagaagcaaattctgattccgattggagatttctggacagtctgacaaattgcagcaatctgaaggtaattggtctggctggaaacaagctgcgaggacttcttccgggctcgattgcgaacctttcgacgagcatggagttcttgagcatatacaacaacatgatacatgggcaaatacctcagggaattggcaaccttgtcaacctggactcgatttacatgcatctgaataaccttgctggcaccattcctgactcaattggcaagcttaagaagctgagtaacctgtacttgtatgacaacaacttgtcagggcaaattccagcaacaattggcaatcttaccatgctgagcagactatccctcaacgagaacatgctaactggctccataccatccagtcttggcaactgccctttggagacactggaactgcaaaacaatcgcctcactggtccaatacccaaagaagttctccagatatctactctctccacctctgccaatttccaaaggaacatgctaacaggatcattgccatcagaagttggtgacctgaaaaacctccaaactttggatgtatctggaaataggttaactggggaaattcctgcctctctcggcaattgtcaaatcttacaatattgcatcatgaaaggaaattttcttcaaggagaaattccatcctcaatcggacaattgaggggtctcttggttcttgatctatcaggaaacaacttgtctggttgcattccggacttactcagtaacatgaaaggtattgaacgcctggatatctccttcaataactttgagggtgaagttccaaaacgtggaatatttcttaatgccagtgccttttcggtcgaggggatcactggcttgtgtgggggtatccctgagctgaaattgccaccttgctcaaactacatcagtactaccaacaagcgattgcacaagcttgtcatggccatctccacagcctttgccattctgggtattgctttactgcttgcactatttgtattctttcgtcaaacaaggaattcaagaaagggagagcatgccttactgctcatcagtgatcagcatgtcagggtttcatatactgagttggtgacttcaacaaatggttttgcttctgagaacctcgtaggtgttggaagcttcggctctgtctacaagggaacaatgatgagcaatgaagaagaggtggttgtcgctgtgaaggtgctcaacctccagcagcgaggagcatcccaaagttttgttgcggaatgtgagactttgagatgtgctagacacaggaaccttgtgaaaattttgacggtgtgctcgagcattgattcgagaggtcttgatttcaaagccattgtatttgattttctaccaaatggaaacctacaccagtggctgcaccccagggaacatggcaaccaaactggacttagtcttatccagcggatcaacattgccattgatgtagcttcagcacttgaatatcttcaccaatatagaccagccccaatagttcattgcgattttaagccaagcaatattctccttgataatgacatggttgcccatgttggtgattttgggcttgcgagatttgttgatcatggtcaacatagcctcccagatatatcaagtggttgggctacaataaggggaaccattggatatgctgctccaggtcaggttcaagctataccctatatacatgttctctacaaatttctatagattcatttctcccttttgtaatcattgcatggtaaaaagcactaccatacacctgcaagtaaaaattaactttactaaaaaaacaaaacaatattagtagacaaaatgctaaaacttgttttatttgatgaagatagtagcgatttatatggttgcaatatttatgtgtctcaaaccagagtatggactcggcaacaaagtctcgatctacggcgacacatacagcttcggagtactactgctggaaatcttcacaggaaaaaggccaacggatgctgatttcgcgcaagatctcagccttcacaggtatgtgcagatcgcgctgagagatcaccaagtcgccagcgtgatagacgaacagctactactgtcagtacaagacggcgaaaatgaaggaagagcatccaacagctccagtagtagtagcagcaccagagaagtgattattgcgtacatcgcttcgattctgcagattggaattcggtgttcggaggatgttccaacagatcgcctgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0498650, RefSeq:Os12g0498650