BGIOSGA013551

From RiceWiki
Revision as of 10:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013551| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013551, complete gene.| tag = OJ1124_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013551

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013551, complete gene.

LocusTag

OJ1124_H03.5

Ensembl Transcript ID

BGIOSGA013551-TA

Ensembl Protein ID

BGIOSGA013551-PA

Length

3223

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34948356..34951578

Sequence Coding Region

34948356..34948403,34948596..34948655,34948757..34948796,34949384..34949562,34950220..34950258
,34950334..34950420,34950541..34950601,34951062..34951186,34951280..34951371
,34951461..34951578

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34948356..34951578 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34948356..34951578 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGCCCTTCTTCTCCACGCCTTTCCAGCCCTACGTCTACCAGAGCCAGGAAGGATCTGTGACGGCGTTCCAGATATCCGGCGGCGATGTGCAGGTCCTGCAGGTGATGGTTAAGTCACAGGAAAAGTTGACCGTGAAACCAGGTACAATGTGCTACATGTCTGGTAATATTCAAACGGACAACAACTACTTGCCTGAAAATGATGGAGGTGTGTGGCAGTGGATTTTTGGGAAAAGCATAAGCAGCAGTGTTTTCTTCAACCCTGGCTCTGATGATGGATATGTTGGGATTTCTGCACCATTTCCTGGGAGAATACTGCCTATGGATCTAGCAAACTTTGGTGGAGAACTTCTTTGCCAGGCAGATGCTTTTCTCTGCTCAGTTAATGATGTGTCAGTCACAAGTACAGTTGAGCAGAGGCCGCGAAACATTGAAATTGGTGCAGAGGTGATCCTCAAACAGAAGCTTAGGGGTCAAGGGATGGCTTTCCTTGTTGGTGGTGGATCAGTCATGCAGAAAATTCTTGCCCCTCGTGAGGTGATTACAGTTGACGCTGCTTGTATTGTGGCTATGACAACCACCATCAACTTTCAGTTGAAAACCCCTAACCAACCGAGAAGAGTAGTCTTCAGTGGGGGTAACCAGCTTACAGCATCTCTCACAGGACCAGGCGTGGTCTTCATACAGAGCCTACCCTTTCATCGGCTTTCACAACGCATTGCAAGTAGATCAGTGGCCGCTCCGAGCTTGAGGGACAATCCCAAGTTCTTCATCCAGATTGTCATGTTCTTCTTCCTCGCGTATGTCATGATTGTATCATCGATAATTCTGACAGATGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MAAPFFSTPFQPYVYQSQEGSVTAFQISGGDVQVLQVMVKSQEKLTVKPGTMCYMSGNIQTDNNYLPENDGGVWQWIFGKSISSSVFFNPGSDDGYVGISAPFPGRILPMDLANFGGELLCQADAFLCSVNDVSVTSTVEQRPRNIEIGAEVILKQKLRGQGMAFLVGGGSVMQKILAPREVITVDAACIVAMTTTINFQLKTPNQPRRVVFSGGNQLTASLTGPGVVFIQSLPFHRLSQRIASRSVAAPSLRDNPKFFIQIVMFFFLAYVMIVSSIILTDV</aaseq>

Gene Sequence

<dnaseqindica>1..48#241..300#402..441#1029..1207#1865..1903#1979..2065#2186..2246#2707..2831#2925..3016#3106..3223#ATGGCCGCGCCCTTCTTCTCCACGCCTTTCCAGCCCTACGTCTACCAGGTGGGGCTCCTCCGCTGCACGATCTGATCCTTCAATTTTTCCCTTCGCACACACGGTCTGGTCTTATCCCGGCGTGGATGTTAGGGCTAGATTCGAGCTCGTCGGGCTGGATCCGCCCGATCCGTAGCGTTTGGTTGCTGATTGGAATCCCCTCTGATCTAACCTGGTTTGAATCGTGTGTGTTGGTTCCAGAGCCAGGAAGGATCTGTGACGGCGTTCCAGATATCCGGCGGCGATGTGCAGGTCCTGCAGGTAGCTCCTGGTTATTCTTGTTTGCTAGCTCTTAATCTTCGATCCTTAAGAGGAATCGAACCCTGCTCATTCGGAATTGTTGTGTCGAAATGATATTTTAGGTGATGGTTAAGTCACAGGAAAAGTTGACCGTGAAACCAGGTACTCTCCAGTAACTTGATTGAACTTCTCTTTTGCAGCTGAAATATCTGCAGCTTGCCCGATTTATGAATACTCTTTGTTTCAGATGCTGAATTACCTGTTGTTTTTAAGGTTAACTTTGTAATAATTGGGATCAGTTGCAGAACTATAGATTACCACCATACTTTTAGTTGTATGTTATGATAAAACCAGATAAATCTAATATACATGAGTAGTTTCATTACTATCATGGTTTTGTAGTGCAATTTACTGTAACTTGTCCTGAAATTCCTAGTAAATTAAGGGGCTATGTGGGTTCCTTTACCTACCCAGGAGTACCTAAATTTGGATAAGGATTTACATGCTCATAGATAGGCAACGGAGCCAAACATACATTTATGCGGTTATTGTAATAGTAAATCCAAAACTGTTGTTGTAAACATTTCAAATTGTCTTCTTTAGATGAATGGCAGAGCTCCTGCCCTACTCCCTCGAAAAAAACATGTATGCAGTTGTTACTGCTAGTGCTTGTCATATGGCTTCTGTGAATCCTGTGATGTTCTTAGAGTTTGTTAGTGTGTAGCTTTCATCATTGTTGTATTCTTCAGGTACAATGTGCTACATGTCTGGTAATATTCAAACGGACAACAACTACTTGCCTGAAAATGATGGAGGTGTGTGGCAGTGGATTTTTGGGAAAAGCATAAGCAGCAGTGTTTTCTTCAACCCTGGCTCTGATGATGGATATGTTGGGATTTCTGCACCATTTCCTGGGAGAATACTGCCTGTTAGTATCTTTTTTGAAAATAGAGTCATTATGTCATTCAAATCCCTAGTATCATCTTTCACCTACTTGTAGCTTAGCTTTGACTCTCTGCACCATTACTTTACTTACTGTACAGAACTGCATATGAGCATATCGCTCATGGGTAATCATCACTGTTGTCCTCTTACAATTAGCAAGATTACATATCTTATTAGTGACAAACTGACAAATTTCCATCATTCTTCTATAATTATGATTCAGAATTTAGACTGTTGGAGGACTTGCTTCATTCTTTTGTTCAAAATTTCAAATGCACTCCCCAGCACTCAGTTGTTTCCAATCTGAACCATATGTTTTACCTATAGATAAAAAGGTCAACAGTTCATTGTGCATACATTAGAATTTGGTCCTGTAGCAATTAATAATGAGGTGTAATGTGCATACTAGCATGATAATAACATGTATGAGTTAATCTAGTAAGCTGCATGAGATGTAGGTTCTGGATGACTAGATGTGATATTATCATATTATTCCAGCAAACCATTGCCTTCCGTGAAAATGAATACCTGGTTCAGTGTTCATATAATTTACTCTATTAAATTTTATGGAAAGTGGTACTTATATTATTGACCAACCTGCTTTCTTAGTCATAAATGGAAAATGTTTATTATATTACAGATGGATCTAGCAAACTTTGGTGGAGAACTTCTTTGCCAGGTAAGTTATGTGCGAAGTTAGTTGTTTGGCTGAAAACAATCACAGAAACCTCATATTACCTTATTGTCCTTTCAGGCAGATGCTTTTCTCTGCTCAGTTAATGATGTGTCAGTCACAAGTACAGTTGAGCAGAGGCCGCGAAACATTGAAATTGGTGCAGAGGTAGGGTAATTAACTAATTATTTAGGTACTTTGGAGATCATGTGGGACCTGTTAGTTCTTTGCAAGCTAGTACTTGTTAACTTTTTGTTGGGAATTGAAAGATGTGCATTCCCTCTACAGGTGATCCTCAAACAGAAGCTTAGGGGTCAAGGGATGGCTTTCCTTGTTGGTGGTGGATCAGGTATAATTCATTTCACCCTTTGTGTCAGTTTCATGGACTGGAGATTGATTTTGGAATTTGAAACTGCAATACTGTTCTGATCTATGGAGTAAATACTAGAATATATTATTGTTCATACTATAATTAGGAGCTATGGTTCTGATGTTCTGTAAAATTTTTAGGATGCATTGAGGATATATACTATCTAGTGCTAAAGGAACATAATATGGTGCCACAGTTTATGCTGGCATGATTTTAATGTTGTCAACATTGGCAATACCTGCGGCACTATCCAATTCACTATATATTTACATATTATGTCATAAGTTAGATAGTGAAGTATGAAATCTCCGATTTGTTTCAAATTAGCATGGAACCTTTTGAACTCATATCGTTTTTGTTTTGACATAAGCAAGTTATTTTTTAACCCTGGCCAACAAAGCCCCTAACTCTGGCAGATTTTGCTCTTCACTTTTGCTAGTCATGCAGAAAATTCTTGCCCCTCGTGAGGTGATTACAGTTGACGCTGCTTGTATTGTGGCTATGACAACCACCATCAACTTTCAGTTGAAAACCCCTAACCAACCGAGAAGAGTAGTCTTCAGTGTGAGTACATCCGTCCCCCCTACTGCCTATCAACTAAAGTTTCTTGTTGAAAATAACTAATTTCCTTACACTGATGAACCATCGGCTATGCAGGGGGGTAACCAGCTTACAGCATCTCTCACAGGACCAGGCGTGGTCTTCATACAGAGCCTACCCTTTCATCGGCTTTCACAACGCATTGCAAGGTAAGATATGCTGCAATGCATCATTTTGTACCACACCTAGCTCATCACCGACTGTACATAACTGAATTTATTCTTGTATTCTCAAGCAGTAGATCAGTGGCCGCTCCGAGCTTGAGGGACAATCCCAAGTTCTTCATCCAGATTGTCATGTTCTTCTTCCTCGCGTATGTCATGATTGTATCATCGATAATTCTGACAGATGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013551