Os12g0498800

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0498800| Description = Conserved hypothetical protein| Version = NM_001073346.1 GI:115488653 GeneID:4352266| Length = 4901 bp| Definition ...")
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Gene Name

Os12g0498800

Description

Conserved hypothetical protein

Version

NM_001073346.1 GI:115488653 GeneID:4352266

Length

4901 bp

Definition

Oryza sativa Japonica Group Os12g0498800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19083630..19088530

Sequence Coding Region

19083852..19083925,19084051..19084284,19084358..19084444,19085693..19085777,19086141..19086486
,19088228..19088394

Expression

GEO Profiles:Os12g0498800

Genome Context

<gbrowseImage1> name=NC_008405:19083630..19088530 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19083630..19088530 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtcggcatcgcgctgctgctcgacctcgcctcccgcggcccccgctacgcctccggggtccacgcccactccgcgatctccgcctccgccgccgccgccgcggccgcagccgccgcgctctccgccaccggcatccccctctccgcgcgccacctcttcggtttccctgggtttactatagcccattgtgatgctggtgcaccaactggattgaatgatgctcctgatcttattaatggtcttaatgacaaaatacaagactccctccagtacccaataaaggaataccccttggagttgaagccactcttttcggcctttgctttaaagaattttagcttgacaaccctgaggtccttcttattgtactatttgccacttttggaacctcatccgcacactgatggtgatgatgaggatgacctgcttcaagatgagtctgaaaataggccacctgttgatttggttactcccttctacaattcagtgaagcaaatcatccgtgagacttctgttgtaacaaccagaagaatattggaaaggattgcagtttgtcatgtttcacaaagaacagcatggaagcttctcaaggatgcctcaaaatcatcaaagaggaaatctgtaagggggatgcccttccaagagtactcatattgtgttgctagaacgactttccgagcgcatgcattgggagttgctgctgcttgggttgtgcaatccatagttgaggtttacagatgttttttcggtaagccttccaatgatcaggcaatgtttgatgagatggacaaagtcaaactgttcgggaaaaagatatacggcataaccgtcaaatgcgggttctctttggtttttgcctcaataggagctggcattggggtccttgtgcatccagtacatggacagtggcttggttgtacattgggagatttcgcgggaccaattgtcgccatacttgttttcgagaagttccagttgccgctctaa</cdnaseq>

Protein Sequence

<aaseq>MAVGIALLLDLASRGPRYASGVHAHSAISASAAAAAAAAAALSA TGIPLSARHLFGFPGFTIAHCDAGAPTGLNDAPDLINGLNDKIQDSLQYPIKEYPLEL KPLFSAFALKNFSLTTLRSFLLYYLPLLEPHPHTDGDDEDDLLQDESENRPPVDLVTP FYNSVKQIIRETSVVTTRRILERIAVCHVSQRTAWKLLKDASKSSKRKSVRGMPFQEY SYCVARTTFRAHALGVAAAWVVQSIVEVYRCFFGKPSNDQAMFDEMDKVKLFGKKIYG ITVKCGFSLVFASIGAGIGVLVHPVHGQWLGCTLGDFAGPIVAILVFEKFQLPL</aaseq>

Gene Sequence

<dnaseqindica>4606..4679#4247..4480#4087..4173#2754..2838#2045..2390#137..303#accttccgcctcgccttccgggcttcctccgctccacgccggcgagtccacactcctccgaccagccgccgccgccgccccgcgtcgtcacgcgcgcgcgcgcgcgagagagagagatccccctgccccagccacgatggcggtcggcatcgcgctgctgctcgacctcgcctcccgcggcccccgctacgcctccggggtccacgcccactccgcgatctccgcctccgccgccgccgccgcggccgcagccgccgcgctctccgccaccggcatccccctctccgcgcgccacctcttcgggttcgtctcctccccactactgtcccctcctcacccacctgttgcctatcgactaccaatcgtcgtcttgtctagctagggattttctcctctcttttttttctttttctttctttctttctttttcccccctgctatcgactatcaagcggtagtgcttgtttcgatccccaatgttgacttgctagtggagcgggaggtcctccggagaaccaggaatcccgtcctcacatgtagatgtagagctcttgatgatgttgtcgatagcatggtgtgttgattaggagtagcatagtgcggcatatttgcctttgttgcacttgtgggtttagatcaaagatgtgttcttttaatgcagatgtggaaggtaaatgctctgttactggtgctcctgtggtagttcatgtgttatataggagaaagttaggtagcctagttctttgcacggcattcggtagatgaggtgcatgatgtgtttaagtagtagagtcatttctcatttacaggtataattttcatgcctccaatcttaaaatatattgatgttcaagatttatgaagtttgacttgaaacatgtccaaaacaacatgtttttgtgactggacgtagtagtaataatgcttctgttgatcccatactttgcattttacattttatggaagttcagatagcttgtctttttatgtttaatgattcttgttaggttgtcatagcagtcacttgctcatagagctgaagtgtttgccatttagctggcttttgttgttgtaattttctcttggtttaataattatctgtctggtcatcatcatgattttccaaccaacagtgatgcaaacaaataaagacaatttttgtatttaggtggtgtttggattctgggactaaactttagtctctgtcacattggatgtttggacactaattagaagtattaaacgtagagtaatgagtaataacaaaacccattccatagactaattcgtgagacgaatctgttgagcctaattaatccatgattagcctatgtgatgctacagtaaacatgtgctaattatggattaattaggcttaaaaaatttgtcttgcgaattagctctaatttatgcaattagttttattattagtctatggttaatacttctaattagtgtccaaacatccgatgtgacagggactaagatttagtccctggatccaaacaccaccttaatgtatcattcatggtcttaatcaatagcatgtaagtgttttgttcaactttgggatttctacaaactgctttacctgctagttcgaatttaatgttttattgacaatatatgttttgccttctcttatttgtgtttacactaccacttttcatcatataaaggttagaacttttctcacttgatggtcatagctgaaacaagcatatttaagctgaaattaaatgtgaatgtccactaccctcgcccatctaatgatgctaaaagaattacaatagtattacatatttttgcaaatgtgaattaagatttttcttttagcactgtattcgctaataagccatgcacctaggctaactaatgaatgtaataaaagatttctccactgccataggaaaatgcacaaatacacctgactacagacattttctgattcttataagacatgtttatatatatttttttttctttgcttcttattttttgttctgttgagctaatacccaattaattttgcatttttcttcagtttccctgggtttactatagcccattgtgatgctggtgcaccaactggattgaatgatgctcctgatcttattaatggtcttaatgacaaaatacaagactccctccagtacccaataaaggaataccccttggagttgaagccactcttttcggcctttgctttaaagaattttagcttgacaaccctgaggtccttcttattgtactatttgccacttttggaacctcatccgcacactgatggtgatgatgaggatgacctgcttcaagatgagtctgaaaataggccacctgttgatttggttactcccttctacaattcagtgaagcaaatcatccgtgaggtacctgttcactgaactggcagaattgatgtttgttgattttttttaattattgttgtctcaatcttagttgttcaactggactactattttagccacagtagtttcctcaagttacaccctatttaaggcctgggccactgaagctctcgtgaataggttagcggcttcctggggatccttctataaacttatgcccaccttgcactacaagtcccaactaagctgaagccattgaacttataaactggagtgtaacctagcttatatattctaaaagttaagccctaaaaggtcaatactagtttgcgtaatcagaggtggaaaagtcactgactatgctcttcttgttttacatttcagacttctgttgtaacaaccagaagaatattggaaaggattgcagtttgtcatgtttcacaaagaacagcatggaagcttctcaagggtaatatttttttttctatttatcagatattctactaaatttgaaagagctatggcatccaagcagacacctgtgcagctcccttaagtccataaatataagtcggagaacgagatgcattttttatactccctccatcccaaaatataagaacccaggatcggatgtaaaatttcctagtacgacgaatatggataggtttggatgggtcttgggtcttatattttaggacggaggtagtagattttctcaagaaaatgtttttgctacctgtgcagtacattatgaagtacatttttcagttaatttattttacttgagttttgccattcctctcctccgatctagcttttgcatccttgtacagatgataatgtgctattgatatagctaagtggactaaactttgcaaatgtttgcaattagaagcaccgcatgcaagcaattattgtagtaatatttatagatgacattaacaatttcacagccaatggattttaatgtgaaccaatggctttgccatgtaggttaagtaagatcttagtctagattaaaactaggattcaggaggttggcatgtatgattaactacaaatcaatgtggttttattctgattgagtaactctgcaaagacatttccatgagttaaaaatagaaattctctataatattgactttcaaaggtcttgcttttacttgtgattcaaacacttggactacagaaatcgttactgttataattttatagttttatttctcatgcatattatatagtggattattgttttactgttataatattacccaaatatctgttggcttgttcatagttggacaatcttaggatcatgtatcatctgaacgttagtacagtagaattttatgtttgggatgaactgtgactaacttcctaaaacttgaccttagctcggggtgcatgaaaaacctagttcaatatagtatggctggcctcactagagcttatctctcttcaagcttatacacgcctccaaatttatcttagatatgccacatactttatctgctttgagatcactattcatgataagcttcatatgttttgtcatgtcacatatagtcatatgtattatgatgcttctacgtttcaacagtcaacaaattaatcttaagttttgcttttaatatcttgtgattgcgttaaatattatcagtttatcatttaccgctgttttatgccatatgttttaattatgttctatctatagatgcctcaaaatcatcaaagaggaaatctgtaagggggatgcccttccaagagtactcatattgtgttgctagaacgactttccgaggtcagttttgcctgcaatttgtcaattttccacttgtagatcatttctcatatttttttcttctttaaaacagcgcatgcattgggagttgctgctgcttgggttgtgcaatccatagttgaggtttacagatgttttttcggtaagccttccaatgatcaggcaatgtttgatgagatggacaaagtcaaactgttcgggaaaaagatatacggcataaccgtcaaatgcgggttctctttggtttttgcctcaataggagctggcattggggtccttgtgcatccagtacatggacagtggcttggtgagtaaccatttaccgtcttcctttaatacaagaagttgcattgtgataatttttacggaagagctgtcagaatgatggtccaatccgaactaagctgacattgtttttctgctggattgcaggttgtacattgggagatttcgcgggaccaattgtcgccatacttgttttcgagaagttccagttgccgctctaaggtgaaaaatgaaaccccgcggcttctacgcaactagccttggtggagatctccatgactccatgagacctgacttgaagttcgatgaataatttagctgtcagcctctatgcgcaaaagtccatagcttgttttattttttttcaagacacgcctttgggcatcatgagatgttgatattatgttctttagattttgaaactcaggctaacagttttgact</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0498800, RefSeq:Os12g0498800