BGIOSGA013619

From RiceWiki
Revision as of 10:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013619| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013619, complete gene.| tag = OsI_136...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013619

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013619, complete gene.

LocusTag

OsI_13647

Ensembl Transcript ID

BGIOSGA013619-TA

Ensembl Protein ID

BGIOSGA013619-PA

Length

6844

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35822545..35829388

Sequence Coding Region

35822545..35822903,35825106..35825220,35825351..35825522,35827012..35827083,35827162..35827325
,35829266..35829388

Genome Context

<gbrowseImage1> name=IndicaChromosome03:35822545..35829388 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:35822545..35829388 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTCGGACTCGGAGCTGGTGGAGCGGCTGCGGGAGGTGCTGCGGTCGTCCGACCTCAACACCACCACCACCGCCATCCTGCGCCGCCGCCTCGAGGAGGACTTCGGCGTCGACCTCTCCGACAAGAAGCTCTTCATCCGCGAGCAGGTCGACCTCCTCCTCTCCGAGGTCGCCGGCAAGGCCGAGCAGGAGGAGGCGGAGGTGCCCAAGGAGGAGGAGCCCGAGACCGGGGCGGAGGCAGCGGGTGGAGAGCCAGGGGGCGCTGAAGGGGAGGGGGAAGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGACAGTAGCGGCAGCCGGAAGAAGCGGCGATCAGATGGAGCCAATACTGATGGCAAGAGAAAAGGTGGTGGCTTCACCAAATTATGTAGCATTTCCCCAACGCTTCAAGAGTTTGTTGGTGCCTCTGAGTTAGCTAGGACAGAGGTAGTCAAGAAGCTTTGGGCATATATCCGAGAAAATAACTTGCAAGACCCAAGCAATAAGAGGAAGATTCTGTGTGATGAGAGATTGAAGAAGATCTTCAATGTCAACTCCATCGATATGTTCCAAATGAATAAAGCATTGACGAAACACATATGGCCATTGAATTCTGATGGTCCTGTGACCTCTGCCTCACCTGAGAGATCAACACCCAAAGAGAAGCCTCAAAAGAGAGAAAGAAATGAAGGGAAGAAGCAAAAAGGTGGTTCTTCTGGGTCTGGATCTGGTTTTCTTGTGCCCCTTCAACTTTCGGATGATTTAGTGAAATTCATTGGCACTGGTGAGAGTATGCTTTCGCGATCTGATGTTGTGAAAAGAATGTGGGACTATATAAAAGAGAATAAATTACAGGATCCTTCTGACCGGAGGAAAATAATATGTGACGAGAAGCTGAAGGATCTATTGCAAGTTGAATCATTCAATGGCTTTACTGTTTCGAAGCTGCTTGCTCCCCATTTCACCAAGACAAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MVSDSELVERLREVLRSSDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLLSEVAGKAEQEEAEVPKEEEPETGAEAAGGEPGGAEGEGEEEEEEEEEEEEEEEEEDSSGSRKKRRSDGANTDGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNKRKILCDERLKKIFNVNSIDMFQMNKALTKHIWPLNSDGPVTSASPERSTPKEKPQKRERNEGKKQKGGSSGSGSGFLVPLQLSDDLVKFIGTGESMLSRSDVVKRMWDYIKENKLQDPSDRRKIICDEKLKDLLQVESFNGFTVSKLLAPHFTKTK</aaseq>

Gene Sequence

<dnaseqindica>1..359#2562..2676#2807..2978#4468..4539#4618..4781#6722..6844#ATGGTGTCGGACTCGGAGCTGGTGGAGCGGCTGCGGGAGGTGCTGCGGTCGTCCGACCTCAACACCACCACCACCGCCATCCTGCGCCGCCGCCTCGAGGAGGACTTCGGCGTCGACCTCTCCGACAAGAAGCTCTTCATCCGCGAGCAGGTCGACCTCCTCCTCTCCGAGGTCGCCGGCAAGGCCGAGCAGGAGGAGGCGGAGGTGCCCAAGGAGGAGGAGCCCGAGACCGGGGCGGAGGCAGCGGGTGGAGAGCCAGGGGGCGCTGAAGGGGAGGGGGAAGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGACAGTAGCGGCAGCCGGAAGAAGCGGCGGTGAGGGGCTTTTTCGCTCTCCATCTCTCTCTCGCTGCATTCGATGCGTTCTGTAGGGTCCTCTGGGCGCGCCTGCCTCGTCGATTTGTCGGAAAATGTGGCTGCTCTGTGCGTTCCGTGCCTGGTGTTCGATGCGAGCAGTGCTGGAGATTTGGGGGCTTTCGTGCGTGATGATTTGATCTTTGCTCGGAGGGTTCTGGGGTTGCATTACATCCTAAGTTTTTTTGTTACTACAAAAGCAAAGCAGTTCTCTAGTTGGGGAAATGCCTTATGGGTCTGCTTGGTGATGTGATTTTGTCCAAATTAGTGAGCTATTGCAAAGATTTCCTTGCATTTGGTATTGCTAGTTACATCTGTGCGAAGTCGATTCGCTCTAGCTGTTCATTGCTGTAACTCGCTAGGCATTTTTTGGGTGATATTGTGCTGATTTCGCAGGATGTTCTGATTGATTTGCTGGGTCTGGCTGTTACTCTTCGAGAAGGGCGTTAGTTTTGTGCTTTAGGTGACCTACTTCCGTTCAGTTGTTGTGTTTATGGAGTATTTATGCGGTTGTGCCTGTTGTTTTTTGGTGGGTTTTAGGTTGCATAATGCTAGTTAGGAACTTAGGATGGTCTAATGCTTAGGTTCGTGGTAGGTTGATGTGTATGTGAGTTTTGCTGGGCCGCAACTGGATGCAACTTTTGTTTATGGTTACTACAACATCCTGCTGCAGTTATTTCTGCACTTCCAACTTTCCGAGTTATTCTCGATTGCAAGGAAGACAGTCACAGACCACACCACGCAAGCATATCACATTCACACACTGAACTGCACACCATAGCATATGCCTAAACTGATGAAGACTAGGGAATAATCCGTAGACCTAACAAAATTCATACCAAGCTCCATCTTGTGTGTACATTAATTTGGTTCACCTGGTAGGTTCTGATATTTAATGGAGTGGAGGCTATGATCTTTACTTATGCTAAAATTTAGTGAATATTCTATACTTGATAATTGCTGCAAAATATTCACAATCAATGGAGATGATGCGGTGATTTTACTCCTCAGTCCTTACCATTTCACCCACTTACTAGCTCAGGGACATCCCCATAGAACTGAACCCATTCTTTGTGCACTTGGTAGTAATAGTATGTTACACCGAAGTCTTGACAATTCAGGCCTTTTATTTGCACTCAAATGTTTTATCTGTTTTTTGGTTGCATGTCCTTGGTGGCTCCAGTTAGGATCTACCATGTAAACCTGTGGAAAAGTGGCAAACTGTTAGTGATTTATGTGTTGCCACGTGCTTTCATGTTACTTGGCACTCGTTTGATAGAATGTGGTGGTGTATAGGCTGACTAATATTTGTGTAGGTAGAGGAAACTTACTGGCTGGATTGAACTAAACAGGGTTTATTGAATTACGTCTGCTAAACTTCCGAGTTAGTAGGTTGGGTATTTTCTGCTCCTATTTCAGTGCTCTAATAATATTTGAAAGATGTTGAAATTATTTACTTTGATTTTTTTGCTGCTCAGATGTCTTGAAATATTTTCAGTGTTATGGAGCAGTCACCTTTAGTTCCTCTCTGTCAGGACATGGTTTTGCTATGATGAATTGAAGGGTAGATTTAGGTTTCATTGTTTCTGTTACAAGCTATGGTTTCAGATTATAATGAAATATCTTGGACAGTCCGAGACAATAAAGGAAAATCTGAGCTGATATGTGTGAGAAGATGCTAGCTGTAATCAGTTGGTATTTGTTACTGTTAATCCCTGATAGATTTTTTGAGTTCTAACACTATTAGGTTTATTATAGAGGGACTTTCATATGCCTTTTTCATTGAACTGTTGCTAACAACTACTCCCTCCGTCCCATAAAAAACCAACCTAGTACTGGATGTGACACATCCTAGTACTACGAATCTGGACATACCTCTGTCCAGATTCGTTGTACTAGAATGTGTCACATCCCGTCCTAGATTCGTTTTTTTCGGGACGGAGGGAGTAATGCATGCTGTTATTCTTATGTTGTGCTTTGGAGCTGTACTCCTGCCTGACTCATGAGATTGAGTGGCAAAGTGACTTATCATCATTGTAGATATATTTATGCAATGTTCTTTGAGCATGTCTTAGCTATTAAAGAGTTTTAAGTAATATGTTTTCCTTTCTGAATGGTCACACTATACTCAAAGAGTTTATTTATTTTTATCAATGACAATAGATCAGATGGAGCCAATACTGATGGCAAGAGAAAAGGTGGTGGCTTCACCAAATTATGTAGCATTTCCCCAACGCTTCAAGAGTTTGTTGGTGCCTCTGAGTTAGCTAGGACAGAGGTAACACCACTTGCTAATTATGGACATTTCTTAATACTTCATCAGATGAATGATAGAGTAGTTGATCGTGAAAAGGATGTAGGGTGGCGTTTTTCTTGATTTCTTTAATCTTGTGCTTATGTACCTTCAGGTAGTCAAGAAGCTTTGGGCATATATCCGAGAAAATAACTTGCAAGACCCAAGCAATAAGAGGAAGATTCTGTGTGATGAGAGATTGAAGAAGATCTTCAATGTCAACTCCATCGATATGTTCCAAATGAATAAAGCATTGACGAAACACATATGGCCATTGAATTCTGATGGTCTCTTTCTCTTTCTCTCCCCTGCCCCCCCCTCTCTCTCTCTCTCTCTCTATACACACGCGCTCGCGCACAAACACAGGAAGAAAATGGGCACACACTGTGGTCCAACTTATTACAGTGCAATTTTCAGTATACTTTCCTCAACAAGTTACCATCATCTGGCCCTTGCCTATTACATAGAGATATGTGTACTAACCCAAACAGGAAGTACATAGAACCTGCTGTTTCATGTTAATTTACTCCTGACTAGGTTGCTGATGTTGCAATATTCTTTTATTTTTCTACTAGGATAAAATTTCTGATCACTGATGAATACACTACAACACAGAATTGTGCGCGGGCACTGCAGTACATAATAAGGTTTTTGAAATCTGAGCATGGAGGTAGTAGAATTTTTTTGCAGTGAAGTGGTGAGAGAAAGTAAACAAGAAAACGCAGAAAGAAAAAAAATGACCATTAAGTAAAGGAATACGCCAAACACAAAAGCTCATGTTAAAAAAGTTTAATGATATTAGGATTTTATTTGTTGAAGTAACCTGGGCTTGACCTAGGTTGTGGCTGTATAAGTCACTCAGTCAGAGTTCTTGCAGGAGTCCAATGGGCACCTAAGTGACTTAGATGTCGACCAGGAAGGTGTCTTTGGGTTCTTATGTTTTGTGCCAATAGGTCCGTTTTATTTCTTGCTTATGACTTTTTTTTTTGTTTTACTTAGTTTTGTTTGAAAGATTACACTAGCCCTTAAATTGTTCGAGTAAGAAGCTGGACCATAAATATTTTTCATCTTTCTTATGAGTCCAGTTCCTATTGTTTCTGTTATTTGTAACAGCACTACAGCTGCTGGCATGCCTTCGCATGATTGCATCCCAGTTCAGAGCAGCATAAGGAACCATATACACTAAGTTCCAATCCATATAACCTCCAAGTGGGCAGGTGCTCACAAAATGCTGTTTTACATACTCAGCAATAAACAATCATATTTACTGTAAAGCTCACTGCGATCTTAGTGTTTCTTCTAGACTAAGCTGGACATCTTTTACTACCTGAATTGTGTTAACATTATGTGATGAAACCACAAGGGAGAATCTGTACAGCACCCATTTCTTTTGCTGCTAGCTTACCCAAACAACATATTTAAAGAAGACCGAATATCTTGTCCATTTTCACTCTTTGGTTTGTGTGGTCAAGATCAGTATAGGCCTTCATCAATACAAGAATGTATTTGTTGATAAGTCATGTACTCATGTACCTAATTGTAATTATGTACTTAATTGATGTCTTGTTATGGGACCTTCAATGCTTGCTAATTTCCTGGCCAGCTTGTGCTTATTGCCTAGGTAGCCCTCTGCCATTTAACATTCTTAAAAGGAGTAAATGGTGTCGGTGGTTCCATGCCACATAATTAGCTTCTTTGCTGATTGAACTAACTCTAGTGTACTACTCTGCCAGATCTAGCTCTGAGTACGTATTCTGATACCTTATGGTTTTTCAGGTCCTGTGACCTCTGCCTCACCTGAGAGATCAACACCCAAAGAGAAGCCTCAAAAGAGAGAAAGAAATGAAGGTTAGAAAAATTTTAATTAATTCTCCTACAACCATGATTTTCTGTTCTCATAATGTTGTCATTGAAATTTCCTATCAGGGAAGAAGCAAAAAGGTGGTTCTTCTGGGTCTGGATCTGGTTTTCTTGTGCCCCTTCAACTTTCGGATGATTTAGTGAAATTCATTGGCACTGGTGAGAGTATGCTTTCGCGATCTGATGTTGTGAAAAGAATGTGGGACTATATAAAAGAGAATAAATTACAGGTAAATATTTTCCCCCTTGATATTGATGTACTTGTTTGTTAATCTGTTCAAGGCTTTATGATACTTTGGACATCCTTATGGTGCGACATGCAATTTTTACTGTCAAATTTTATATGAAAATGTTAGTAAATGTTAAAGCATGCTATCTTATGAAGTCATTTTTCATGAGAGATCTATTTGTTATCATTTTTGTATTACCAATCTAATAGTTTTTTTTTACATATTACTACTCGAGTTAGAGAAGGTTTTGTTATTAATATTTTTGCAGGGAGAGTTAGAAAAGTTTGATCGCATGCTTTTTTGAAACATCAGACTCCCTCAGTTGCAAAATGTAGTTATTTCTGAAGTTCTAATTTGTCCCATAATTTAGCTATTCCTCCACCTACCCCCTCGTCTCAACCAATCACAACCATCTCCCATTTAATTTCTCCACCTACTTTTTCTTCTCAACCACACAATCTTCCACCATTCAATTTTACCTACTTCCTTAATTCCTGCGGAAATCTCTCGAAATGCTTACATTTTGGACGGAGGGAATATATATACATATACATACATATATATGTATGTATATGTATGTATACGTATATATGTATATGTATATATATATATATATATATAGGACACTCATATGGGGCACCATGGTGCCCGGGCACCATGGTATCTAATGCACAAAATCACTCAAAATTTTCAAAATTTTCAAATTGTGAGTATATACCTAGTTATAATAATTCGATTCATACCTATACCTATCAACAAAACAACTCAAATTTAACTTTATTTCACAATCCATGATTACATACCTAACTAATTATATGTATGGATGCTATATACCTAGAATCAAAATCTAACAAAAACAAGTTCAAGTTCAGGTTAAACTTGCTTTGAACTAGTTAGTAAAGTAGTTAATGTTAATACCTAAGTAATTGAAAAAGTTTCATACTCATTTGAATTGGGTATATACTCAATTTCAACAATGGTACCCGGGCACCATGGAGCACCAAACAAATTTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATACAATATTGGTTTCAATATACTTAGTGGCTTACGCTACTGATTGATTTAACAGCACATGGGAAGGGTTGCCTTGAAATGTAATGAAGAAAAACTCACTGGACGATTCAATCCTGTGGATGTATGAAAAATTATGCTTATTTCAAATGTTTGAATGTTTCTTATTTGTTTAGTCTACTGGGCTTGTATTATATTGGACGACCCCGTGCATGGTTAATGGGGCATTTATTTGGAGTAAGTAATATATAAGATTGTGGTATATATGTTTGAACCGGTCACAGCCATACAATGTTGCCCTGTTAAGGCTAACAATTAGTTGGTACTACAATGTATAGTGCCTTTACTACCCTGGACTGGACCACATGCAAGCACTCTGTAGATCCTAACTATATTTTGTTCGCATGACAACACATACAAACTACCTCAGTAGATGATCAAGTATATTGTCAAACTGAGATATATAGCGCTGGTAACGGCAGTGAGATCCTACAGCCTTGGAAAAGTGTAAACGCAGATAACTCTATTTTATGCTGGTCTGGTATACTTGTCTACTTGTTTCTAAGTTACTACAGTTGTCACCAGCCTCTGGAATGACACTTCCAATCGATAGTTTTGTTTTGAGACGTATCATTATTACATCGGTTTTTCAGTGTCACCAATCCAGACCTGAACTTTTGGTTGTCTCAATTGTTGTAACAAAACTCTTGCATTTGTTTGTTGCATGCACCTGTTAATACTTGGGAGGTTGCAAGTATTGGAATTAACCGAGTACTGAAACTTTCCTATATTGTGCTGATCCCTTTTAGCTATAGCAAATCTGACACATCAAACTTAATTGTTTTCTTCCTTTATTGTTTTCGTGGAAGGATCCTTCTGACCGGAGGAAAATAATATGTGACGAGAAGCTGAAGGATCTATTGCAAGTTGAATCATTCAATGGCTTTACTGTTTCGAAGCTGCTTGCTCCCCATTTCACCAAGACAAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013619