BGIOSGA013620

From RiceWiki
Revision as of 10:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013620| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013620, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013620

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013620, complete gene.

LocusTag

OSJNBA0079B15.28

Ensembl Transcript ID

BGIOSGA013620-TA

Ensembl Protein ID

BGIOSGA013620-PA

Length

1505

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35843208..35844712

Sequence Coding Region

35843208..35843418,35843520..35843665,35843793..35844180,35844273..35844349,35844488..35844712

Genome Context

<gbrowseImage1> name=IndicaChromosome03:35843208..35844712 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:35843208..35844712 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCTGGACGTGGGGGAGATCGGGATGGGGCTGGATTTGAGCCTGGACCTGAAGATGTTCGCGGCGAGGAGCGCCGTGAGGATGGCGGCGGCGGCGGCCAAGGAGGCGACGGGGGTGGAGGCGTGCATCAGGAGCCTCGAGGAGGAGCGCCGCAAGATCGAGATGTTCAGGCGCGAGCTCCCGCTCTGCGCCCGCCTCCTCGCCGACGTGATCGAGCTGATGAAGGAGGAGGCCGGGAAGAGGAGGAAGGACGGCGACGACGCGGAGGCGAAGGCGGAGGACGGCGACAAGACGAAATGGATGAGCACCGCGCAGCTCTGGGTGGACAGCCGCGGCAGCGACGCCGATTCCGAGAATGACCGACGGAGCGGGAGCACCTCGCCGGCGTCGAGGTTGCTCGGCGGCGCGGAGGAGTCGTCGTCGAGGGCCGTCGCGCCGCCGCCGTACTTTAGGAGGGAGGAAAGGGTGGTTCTACGACCCGCTATGCCGTTGCTGCCTCCGGCTTCCCACAGGTCGCCTCCTCCGGCGGCGGCGGCGGCTGCCACCGCCGCCGGCGATGACCACCGGCACGTTGTCGCGTCAAGCTTTGCCACCGCCGTGCCGTCACCCGTCCCGGCGGCGCTTAGCTTGCAGGCTCAGGCGCAGCAGCAGCAGCAGCAGGCGAGGAAGTCGAGGCGGTGCTGGTCGCCGGAGCTTCACCGGCAGTTCGTCGCCGCCTTGCAGCAGCTCGGTGGCCCCCAAGTTGCTACTCCAAAGCAAATCAGGGAGGTGATGAAGGTTGATGGGCTCACCAACGACGAAGTGAAAAGCCATCTCCAGAAGTATCGGCTGCACAACCGGAAATCACCAGGCACAGCTTCAGCGAGCCATTCGATTGTACTTGTTGGTGATCTCTGGGCTTCTCAGGAAGTAAGCTGCTCTCAATCCGGATCACCTCAAGGTCCCCTTCAGCTCTCCGGCTCAGGGGTGGCCGTCTCGGCGGCCACCGCCGGCGACAGCTGCTGCGAGGATGATGACAAGTCGGAAGGCTATGTCCGAAAATGA</cdnaseq>

Protein Sequence

<aaseq>MGLDVGEIGMGLDLSLDLKMFAARSAVRMAAAAAKEATGVEACIRSLEEERRKIEMFRRELPLCARLLADVIELMKEEAGKRRKDGDDAEAKAEDGDKTKWMSTAQLWVDSRGSDADSENDRRSGSTSPASRLLGGAEESSSRAVAPPPYFRREERVVLRPAMPLLPPASHRSPPPAAAAAATAAGDDHRHVVASSFATAVPSPVPAALSLQAQAQQQQQQARKSRRCWSPELHRQFVAALQQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLHNRKSPGTASASHSIVLVGDLWASQEVSCSQSGSPQGPLQLSGSGVAVSAATAGDSCCEDDDKSEGYVRK</aaseq>

Gene Sequence

<dnaseqindica>1..211#313..458#586..973#1066..1142#1281..1505#ATGGGGCTGGACGTGGGGGAGATCGGGATGGGGCTGGATTTGAGCCTGGACCTGAAGATGTTCGCGGCGAGGAGCGCCGTGAGGATGGCGGCGGCGGCGGCCAAGGAGGCGACGGGGGTGGAGGCGTGCATCAGGAGCCTCGAGGAGGAGCGCCGCAAGATCGAGATGTTCAGGCGCGAGCTCCCGCTCTGCGCCCGCCTCCTCGCCGACGGTGAGAACAGCGAGCTTCTGCTTAAAATTGCTCCCCGTTTTCCTCTCGGATTCCGTCGCTGCTTTTTTTTTCTGACGCTTGGTGGTGCTGTCGGTTTGCAGTGATCGAGCTGATGAAGGAGGAGGCCGGGAAGAGGAGGAAGGACGGCGACGACGCGGAGGCGAAGGCGGAGGACGGCGACAAGACGAAATGGATGAGCACCGCGCAGCTCTGGGTGGACAGCCGCGGCAGCGACGCCGATTCCGAGGTGGATGAATCATTCATTTCCATATTTAATATATTCTGTTTTTGATTCCTATCCCTGTTTGATTTACACTGTTTTTTTTATGGAAGTTTTGATTTTTATTGAAACGGGTCGCTGTTTTCGATTTCAGAATGACCGACGGAGCGGGAGCACCTCGCCGGCGTCGAGGTTGCTCGGCGGCGCGGAGGAGTCGTCGTCGAGGGCCGTCGCGCCGCCGCCGTACTTTAGGAGGGAGGAAAGGGTGGTTCTACGACCCGCTATGCCGTTGCTGCCTCCGGCTTCCCACAGGTCGCCTCCTCCGGCGGCGGCGGCGGCTGCCACCGCCGCCGGCGATGACCACCGGCACGTTGTCGCGTCAAGCTTTGCCACCGCCGTGCCGTCACCCGTCCCGGCGGCGCTTAGCTTGCAGGCTCAGGCGCAGCAGCAGCAGCAGCAGGCGAGGAAGTCGAGGCGGTGCTGGTCGCCGGAGCTTCACCGGCAGTTCGTCGCCGCCTTGCAGCAGCTCGGTGGCCCCCAAGGTATATTACATGGTCGACCATCATTTTCACCTTCCATAATTTGCAAAGATCACCGGAAATCCTCATATCTTGTTGTTCCACCATGATTGCAGTTGCTACTCCAAAGCAAATCAGGGAGGTGATGAAGGTTGATGGGCTCACCAACGACGAAGTGAAAAGCCATCTCCAGGTGAGCAAACACCCCTCATTTTATTTCAGCAACCATTTCTTGAAACAAATTAGTTCTCGCTTCCTGATTCATTCATTTCATTATTCCATATCTTGCTTGTTGATACTGATTTTGATCATGTCATGCAAATATTTTCAGAAGTATCGGCTGCACAACCGGAAATCACCAGGCACAGCTTCAGCGAGCCATTCGATTGTACTTGTTGGTGATCTCTGGGCTTCTCAGGAAGTAAGCTGCTCTCAATCCGGATCACCTCAAGGTCCCCTTCAGCTCTCCGGCTCAGGGGTGGCCGTCTCGGCGGCCACCGCCGGCGACAGCTGCTGCGAGGATGATGACAAGTCGGAAGGCTATGTCCGAAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013620