Os12g0500800

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0500800| Description = Similar to Transposase (Fragment)| Version = NM_001073352.1 GI:115488665 GeneID:4352272| Length = 2593 bp| Definiti...")
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Gene Name

Os12g0500800

Description

Similar to Transposase (Fragment)

Version

NM_001073352.1 GI:115488665 GeneID:4352272

Length

2593 bp

Definition

Oryza sativa Japonica Group Os12g0500800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19214588..19217180

Sequence Coding Region

19214910..19215254,19215341..19215664

Expression

GEO Profiles:Os12g0500800

Genome Context

<gbrowseImage1> name=NC_008405:19214588..19217180 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19214588..19217180 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaattgccttgtggcgtaccgtatggaaccggaggtcttcaaaagtactgcagaatttctaagaaggaagaacttggtccgtgacactaggggagttagagtggaggaaaagcttgctatgttcatgtatatgctatcccataatgcgagctaccaagatatgcaatatgaattcaagcatagtggggcgacaatccacctacatattagggcatttttcgatatagtccctactctcacccatagattcattaagccgcctcttgcaaaccaaactcattcaaagatcacatcaaatcctcgcttctacccatacttcaagaattgcttaggagcaattgatggtactcatgttcctatcactataaaccctgagatggcagctccatataggaatagaaagagcacactaagccaaaatgtgatgttagcatgtgattttgacttaaacttcacattcatttcttgtggctgggagggatctgccacggatgcccgggtgcttaggtctgctcaactaaatggttttcgcataccgatgggcaagttttaccttgttgatggtggatatgccaacacgccttcattcctcgcaccttaccgtggcgttcgataccatcttaaggagtttggtcgtggtcaccggcgcccatcaaactacaaataa</cdnaseq>

Protein Sequence

<aaseq>MNCLVAYRMEPEVFKSTAEFLRRKNLVRDTRGVRVEEKLAMFMY MLSHNASYQDMQYEFKHSGATIHLHIRAFFDIVPTLTHRFIKPPLANQTHSKITSNPR FYPYFKNCLGAIDGTHVPITINPEMAAPYRNRKSTLSQNVMLACDFDLNFTFISCGWE GSATDARVLRSAQLNGFRIPMGKFYLVDGGYANTPSFLAPYRGVRYHLKEFGRGHRRP SNYK</aaseq>

Gene Sequence

<dnaseqindica>1927..2271#1517..1840#ctgcctcttctcgactggagcggcgcccgcgccgccgctgctcgtccagacgcgcgccgcggtgggccacgcccgcgccgccgctgctcatcccatcgcgtgccggcggtgggccgcgcatctactcgcgccggcgcctgccgtcactttggcctcctcctctcgccggaaacgacgccgcctctcgtcagatctgccggagttcaacaacggtgtggccttctccgttcggtctccaccatccaggacctcgtccccaacaagaacctccaggacctcgtcgtcatcttctaccagcttgtctaggtatgccaaattccatccttctcctgaattgattggtttggtggttgggaaggtgaaatcttgggctagatctgatcgattatgttgcggatagttaatcttgggctaggtaatcttgtgctaattttacttgtgaaatctctaggcataatctgtgcagctctgtataagttgtggctctgtgtattaattcctgatgctcgtgtggataaagcttgagcatctctgttgatccatgatatactcttaatttttgccctaacaaacttgatacggtttgtgtattaattagaattcttcatgatcctgtgaagcacccaaacttgctttgtcaattcctggaattaaaatgggtaatttactatgggagatgatagtaacaaattctagatgtctgacataatgttcattcgaaggaaaatattttcttcctttccttttatgttgatcaagatatattgaaaggagagtaatcaggttttgtccctttatttccgaacagatatttttgtggttcattgctatggatttctgaaagaacatgcatctgttcatttattatatttctgttgaaggttacacttcaacgtagtaactgacagtatgctgcatttttctttcattctctggatatatagttaatcaggtcaatatacacatagaaattagagaaaaatctttatttagccttgcagaatggaaattaacactcacattaccacatggaattaagtcattctctgaatcgacggaattgcactattagtccttcaaatgtaaaatagaagaaagctctgttgtttatcaaagatatgctctgctgtttatcttttttatgctttgtaatctaatctatagaagtacagaatagccattactacctttgacattaactgcaaccttctgttatctgttaattttttgtagtttggtgcttagaagattcttttttttgttaacatttgtttgcttgatatcacacttttatgtgcttagaagtcatctcacacatgtcaacagttcctggaattaaaatggattcaagggctaaacgtcggaagcgggaggaagaggatgatgatatgattcttttccttttccctgctgtgcatcttttggatagtggtggtgggggagagagaaaacacctaggcatgcatcaacccagactggtgcagaaaaagtgacagaggtacttgaagggcatgtcatgaattgccttgtggcgtaccgtatggaaccggaggtcttcaaaagtactgcagaatttctaagaaggaagaacttggtccgtgacactaggggagttagagtggaggaaaagcttgctatgttcatgtatatgctatcccataatgcgagctaccaagatatgcaatatgaattcaagcatagtggggcgacaatccacctacatattagggcatttttcgatatagtccctactctcacccatagattcattaagccgcctcttgcaaaccaaactcattcaaagatcacatcaaatcctcgcttctacccatacttcaaggtgcaatactaacttggcattcatgtataataaaatattttatttctaaaattaaatcttcttatgtgtttatattattcttgcagaattgcttaggagcaattgatggtactcatgttcctatcactataaaccctgagatggcagctccatataggaatagaaagagcacactaagccaaaatgtgatgttagcatgtgattttgacttaaacttcacattcatttcttgtggctgggagggatctgccacggatgcccgggtgcttaggtctgctcaactaaatggttttcgcataccgatgggcaagttttaccttgttgatggtggatatgccaacacgccttcattcctcgcaccttaccgtggcgttcgataccatcttaaggagtttggtcgtggtcaccggcgcccatcaaactacaaataattgttcaatcaaagccatgcattattgcgtaatcacatagaaagggctattggagttttgaagaagcgcttcccgatcttaaaagtaggcacactacaccctattgaaaaccaagttaggataccagcagctgctgccgtatttcacaacctgattaggaggtacaatgggaatgagggatggttggatcttgatcatcagccacatgatccacaccatatatcacctgaagattttgttgatgttccagcgggaggtgatgagtatggcaatgatgtcaactcactgaataatcaaactcatcaaggaaatgttattaggg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0500800, RefSeq:Os12g0500800