BGIOSGA013641

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Revision as of 10:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013641| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013641, complete gene.| tag = OS03G07...")
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Gene Name

BGIOSGA013641

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013641, complete gene.

LocusTag

OS03G0773600

Ensembl Transcript ID

BGIOSGA013641-TA

Ensembl Protein ID

BGIOSGA013641-PA

Length

7354

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36207767..36215120

Sequence Coding Region

36207767..36207814,36207941..36208018,36208130..36208246,36209646..36209731,36210427..36210571
,36210678..36210773,36211245..36211336,36211608..36211709,36211803..36211949
,36212028..36212178,36212330..36212392,36212482..36212718,36212992..36213096
,36213174..36213287,36213370..36213948,36214831..36214921,36215020..36215120

Genome Context

<gbrowseImage1> name=IndicaChromosome03:36207767..36215120 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:36207767..36215120 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGAGCATCCGAGCTCCGGCTTCCAAGCAGACGGCCACGCTACAGGTGGCTGTGAAGTGCAGGCCACTGACAGACAGCGAGCAGCGGCGTTCGCGGCATATCATACAAGTCATTGATGATAAGAATGTCGTTGTGCTGGACCCTGATCTGTCCAAGGACTACCTTGAACTCATCCAAAACAGGACCAAGGAGAGAAGATACAGCTTCGATCATGTGTATGCGCCCGGGTGCTCCAATGCGGATGTATATAAGAATATATCTTCTACAATTGCTGGTGTAGTTCAAGGCCTTAATGCAACAGTCTTTGCTTATGGTTCTACTGGAAGTGGGAAAACTTATACAATGGTTGGAACCCATAGTGATCCTGGTCTTATGGTTCTGAGCTTTCGCACAATCTTTGATCTGGTAAAGAAGGATGACAGTAAAGATACGTTTGAGGTCTCATGTTCATATCTTGAAGTGTACAATGAGGTTATCTATGATTTGCTTGAAAAATCGTCAGGTCACCTGGAGCTTCGTGAAGATCCTGTGCATGGTATAATGGTTGCTGGTTTAAGAAGCATTAAGGTTCACTCAGCAGATAAGATTCTTGAACTCTTGAACATAGGCAACAGTCGGCGCAAGACAGAGAGCACAGAAGCAAACTCAACTTCTTCACGGTCACATGCTGTCCTGGAGATAACTGTGAAGCGAAAACAAAAAGGACAATATGGTAGTCAGGTTCTTCGTGGAAAGCTTGCGTTGGTTGACCTTGCGGGCAGTGAGAGGGCCTCTGAAACAAACAACTTTGGGCAAAAGCTTAGAGATGGAGCCAACATTAACCGTTCACTTCTAGCGCTAGCGAACTGCATCAATGCCCTTGGCAAGCAAAACAAGAAAGGTCTTGCATATGTTCCATATCGAAACAGCAAATTAACACGAATCCTGAAGGATGGGCTCTCTGGTAACTCTCGTACTGTTATGGTTGCTACGATATCACCAGCTGATGATCAGTATCATCACACCACCAATACACTCAAGTATGCTGATCGTGCAAAGGAGATAAAAACACATGTCCATAAAAACATTGGACATCTTGACACCCATGTTGAAGACTACAAAAGGATGATTGACAATCTCCAGGTTGAGGTTTCTCAGTTGAAGAAGGAATTAGCTGAGAAGGAGCATCAGTTAAGTGTAAAACCTACTGAAAAAGCTGCAGACAATGAGCTATCTTGGCTAAATATCTTGAGCCAGGAAACTGGCGAGAATGTTCAAGAACGCATTAATCTGCAGAAAGCACTGTTTGAACTTGAAGAAACCAATAAGCGCAATCGGATGGAGCTCCAGCATCTTGATGATGCAATTGCAAGACAACAGGTGAAAGATAAGGATTCGGCTGTTCTGCAAGCATTAACATCACGGAGACAAGTTATTCTTGACAACATACGCGACAATGATGAAGCTGGTGCTGGCTACAGAAAGGATATTGAACTGAATGAGAGTCGCAAACGTCAACTCCAAGATATGATCGAGGAAGCCACCAGTAACAATGGCAACAGAACCTACCTCCACATTCTCAGTCAGTACAGACTTCTTGGGATGACTAATGCCGAGCTTCAAATTGAGATGGCTATGAGGGATCAAGTAATATATAACCAGAGGGAATCTCTAAGGAGTCTGTGGAACATTATTTATGGAACAGGGCTAAACCAGAAACAGATTTCTAAACTAGCTGCGAAGCAAGGCTTAACTATAGAAGGCTGTCCTTTGCCTGTGTCAAGTCCTGATGTTACTACCCCACCTTCCTTTTCACCCCATGGAAGGCTATCACCATTCATGTCATTTCCTAGCCCGCAATCACAGCCTTATTCCCCGTCTGCTTGCTTTGTCCAACATGGTTTCAGCACCATGTCTTATCTCAGAAATCAACATGAGACGCCTACAGTATGTAGGCAGGAGCACCTCAGTTCTTACTACATGATGTCTGAGTGCTCGCCTTTTGATGGTGATGGAAAACAGAAGACAAATGGAAGGTCAATGCCATACTTTTCTACCCCGGGAAAACCAAAAGAAATGTATAACTTTTCTCCTGGAACTGAAAGCGAGAGAACTCCCTGCAGTAAGGAATACCCCACCTCATATTCTCGCAATGGAGATTCGCGTGTACAAATAAAGGTAGGATCTCCATCTCCTCCGGATCATTCAATAACCTCCTGGGCGTCACTCACCTCACCTACTCTGGAGACCACCATTCATGTCAGCTCAGCTGTAGCTGCAGCACGGCGAGCACATTGCAACTGCACCAAATGCCATATCCACAATGACAGCCAGCTGGGGCTTGTTCAGTCTGGCTACATTCTTAACTGA</cdnaseq>

Protein Sequence

<aaseq>MPSIRAPASKQTATLQVAVKCRPLTDSEQRRSRHIIQVIDDKNVVVLDPDLSKDYLELIQNRTKERRYSFDHVYAPGCSNADVYKNISSTIAGVVQGLNATVFAYGSTGSGKTYTMVGTHSDPGLMVLSFRTIFDLVKKDDSKDTFEVSCSYLEVYNEVIYDLLEKSSGHLELREDPVHGIMVAGLRSIKVHSADKILELLNIGNSRRKTESTEANSTSSRSHAVLEITVKRKQKGQYGSQVLRGKLALVDLAGSERASETNNFGQKLRDGANINRSLLALANCINALGKQNKKGLAYVPYRNSKLTRILKDGLSGNSRTVMVATISPADDQYHHTTNTLKYADRAKEIKTHVHKNIGHLDTHVEDYKRMIDNLQVEVSQLKKELAEKEHQLSVKPTEKAADNELSWLNILSQETGENVQERINLQKALFELEETNKRNRMELQHLDDAIARQQVKDKDSAVLQALTSRRQVILDNIRDNDEAGAGYRKDIELNESRKRQLQDMIEEATSNNGNRTYLHILSQYRLLGMTNAELQIEMAMRDQVIYNQRESLRSLWNIIYGTGLNQKQISKLAAKQGLTIEGCPLPVSSPDVTTPPSFSPHGRLSPFMSFPSPQSQPYSPSACFVQHGFSTMSYLRNQHETPTVCRQEHLSSYYMMSECSPFDGDGKQKTNGRSMPYFSTPGKPKEMYNFSPGTESERTPCSKEYPTSYSRNGDSRVQIKVGSPSPPDHSITSWASLTSPTLETTIHVSSAVAAARRAHCNCTKCHIHNDSQLGLVQSGYILN</aaseq>

Gene Sequence

<dnaseqindica>1..48#175..252#364..480#1880..1965#2661..2805#2912..3007#3479..3570#3842..3943#4037..4183#4262..4412#4564..4626#4716..4952#5226..5330#5408..5521#5604..6182#7065..7155#7254..7354#ATGCCGAGCATCCGAGCTCCGGCTTCCAAGCAGACGGCCACGCTACAGGTAGATTATAGATCCTTCTGCGATGAAACGGATGGAATGGAGTAATTTCTCGCGATTCTTGATTTTTTGTTGGGATGATGCTGCTTGCTCTGTTGCTTCGATGTGTAATCATGTGTCTCTCTGCAGGTGGCTGTGAAGTGCAGGCCACTGACAGACAGCGAGCAGCGGCGTTCGCGGCATATCATACAAGTCATTGATGATAAGGTGCAGGCTCTAGTTTAGTAGTAAAATGCGTAATTTGTTGTGCAGTTGTTCAGTTGGAATTCTGCCAGATTGTGATTGTAATGTGTTGCCTGTATGTTTTTTGCCCCCCAGAATGTCGTTGTGCTGGACCCTGATCTGTCCAAGGACTACCTTGAACTCATCCAAAACAGGACCAAGGAGAGAAGATACAGCTTCGATCATGTGTATGCGCCCGGGTGCTCCAATGCGGTATGCAGGCTCAGATAGATTGTGATGCTCTAAACTGGAACTGCTTTGTCTGTTACCAAATGGGCTCATATGCTGATTACAGCAAGTGCTTGGAACTGCACCACAGTTTGGAAATTCCTGAATTGTTCATAACTAGCATGTTAGGAAATGATGCCCCTAAAGGCCAAACCCCAACCTACTTCTTTGGATCATTAACTGCTAAATTTAGGAGGTTCTCGTGCTTTGTACAGTTGAAACAATACTGTTGGTACCAACAAAAGGCCAACACGAAGTATTTGTACTATTGTTCAGTCTGGAGCAATCCAGTATGTACTGTTACTAGTGTTAGGTAGTCTACCTAACAAATACATACGTCTGGTTAAGGGAAAAGGACTGTAGTTTAGTTGTTGTATTAAACTCCACAACCTAGATCTTCTTAGGAAAACCTGCACTGTAAGCATGCTTTGCACGCTTATACATTAACTTCATTGCTCCAACCTTTAATACTTGCAACTCTGGGTCCCTGTCAAAACCAGTCTTCCTGACACAGTTACAGTATTCGACACCACGGCCATCTTAGATATACACGACCTCTTGTGCCTATTGTATTAAGGTCTGAAAATTATGTAGGGTAGTGAGTTACCGCACATGTCTTGTGTTTATTTGGTGGACCATACAACCATAAGAGCGCTGAGCGCAGGAGTGCCAAATTGCTTGTGTACTAATTTATTAGCCTGTTTAAAGCAAAATCCATCTGCAAATTTTGTAGTCAGCAAGATCCTGGCCGGAAACAAGAAAACTGACTATCAAATGGTAGCAACTTATTCTACCATATAGCCTATCTTATTATTGTAGTCCAACAGGTCTACAAAAATAATTATCTTTTTCATAGAAATACATCCCTATTTTTTTAAAAAAAAACAAGAAAAAAAATTCAATGGCGCTAAAATGATTTATGTTCTATATCTGACATCTGTCAGTCACATTCATATAGACAAGATGTACAGAACATAAATAATTGTGTGATCATTGGACCATGTTGGGCTGATTAATGAAGACATGTAAATGAACATATGCTCTGTAAATAAATTTTAATTAGCTTATACATAATTGGGCTAACCAGTTTGCAATTATATGCTAACTGGTTTGCAGTTATGTACAAATGTTTTCTTGAACCGCAGTTGCCTAAAACTTACAGTCTTGATAGATTTTGTTTTTGATCTTGGGAGCTTTTCAGTATCTATATTTCCATTACTGAAAAAATGTATGAGAATTACAAGATGAGAATCTGTTGTGTGCGCACACGTATGCACCAGCTTGCTTGCTTGTTAACTGCTGGGGGCAAATGCCATGTTCTCTTGTACTCCACTATCACATTTTAAGATCGTGCTTTGATAATGCAATTACATTACTTGTGCAGGATGTATATAAGAATATATCTTCTACAATTGCTGGTGTAGTTCAAGGCCTTAATGCAACAGTCTTTGCTTATGGTTCTACTGGAAGGTACATGCTCACTGGATAGTTTTGTTGTTTGCAAGCATACTGCCTGCTGCACATATTGCTATCATCACACATACTGCCGTAAATTTCTGAACCCTGAATTATCTCATTTGCTGCTATTGTTAGATATGGTTTACATTTGAAAAACTTGCTACACTCAGTTGGTATGATATGAAAGTGTTTCTTCAAATCAACCACATTATGTTTGCCTGATTTCCTCTTATGTTTTTTTTCCTTTGAGATGCCTAACTTAAAACTATTGTGAATTTGTGATATGTGATATATACTATATCTGCTGAGTTCACCTCATGCCAATTGTAAACAAAATCATGATTATGTTTAGTCCATTGCCATTCTTGTTTTGTGAAACTTAAATAAATGCTAAAACAAACTGAGACCATCCTACCTTTTCAGTAAACTTGAACTTTGGTAAGAAAGGCCTCTTTAGTTTTTTTTTTAATCATGACATAATATGAAAAATATGACTTAGCCACTTTACGGAGCTTCCTTGGTGAAGCTATTATACTATTTGGGCAAGTTCATTTTTCCTTTTTATGGGAATCCACGCTCATCATTGTGTCCATTAATAATGAAGTTTTACAAATACTTCAATACTGATCTAGAAGCTGAAATGGCTCTTATTAGTATTACGCTTCATATGCATAATGTGAAATATTCTGTTATTTGTGATTGTGCAGTGGGAAAACTTATACAATGGTTGGAACCCATAGTGATCCTGGTCTTATGGTTCTGAGCTTTCGCACAATCTTTGATCTGGTAAAGAAGGATGACAGTAAAGATACGTTTGAGGTCTCATGTTCATATCTTGAAGTGTACAATGAGGTAATGTGCAATATATAGTTTCTTAAAAAAGTTGACTATTAGTCTTTAAATTCTCTATACTACATATAAACTTTCGTGAAAAAACTCTGTGCTTTCTGAATTCCAGGTTATCTATGATTTGCTTGAAAAATCGTCAGGTCACCTGGAGCTTCGTGAAGATCCTGTGCATGGTATAATGGTTGCTGGTTTAAGAAGCATTAAGGTTTCTAGCTTCCTCTAATCTGTTTAATTTTTGTGATAATTAGAAAACAAATGCCTTGTAGTAATGGTGTCAATTCTGGCATTTTTTGTTTTGTTTTCTTCATATTTTTTTGGCCATCCTAATGTTTGTAACCTCTTTTGTGCATATAATATCCTCTCGTCATTGAGCCAATTAAGGAAGAGATGATTTTTAAGTTGCACTATTTAATTTATCTGCATGGTTTTTTTTTTTGTCCTTTCTGGAAGAAATACTTGTAGATACCAACCCTTTCAGACTTCTTCAGCTATTTATTCATCTTTTTTCTTTTAATGATTAGTTCATACAACCAATTTCTGCCCTTTGTAACAACAGCAAGTGGTCTACTGTGTTTGCATGCCATTCCTCATCATATTCGTAAAAATAGGCCTAGTCAACATTCCATTCACCTCTACATATAAGAATATTTTGATGATCAATCTTTTATTTGCTTAGGTTCACTCAGCAGATAAGATTCTTGAACTCTTGAACATAGGCAACAGTCGGCGCAAGACAGAGAGCACAGAAGCAAACTCAACTTCTTCACGGTAATTACATATTGTGAATTTCCTTCTTTCCTTTCTGTAAGTAGATGCTGTTATGGCCATTCAGCTTTTGAAGAATTTGTTGATATCTTGCTTAGCAAAACAATGCATTTCTATCTGTTTAATGAACTGCTATTTAAGGAGGATACTTAATATCTTAATCTGATGTATCACTGAGATTTTGTTTCTACGAAGACAGCTGCTGTAGGACGTAGTGCTGGACATCTTTACTATATTCTATTAAAAAGATTTATTCTTTTTTTTAAAATCCAAGGTCACATGCTGTCCTGGAGATAACTGTGAAGCGAAAACAAAAAGGACAATATGGTAGTCAGGTTCTTCGTGGAAAGCTTGCGTTGGTTGACCTTGCGGGCAGGTAATACACTAATACCTACTCCTTTTTGGATTGTTTTTCTCATTTCACCCTGCTAAGAAAGTAAGCTATAAAGCAACGCTTATATTATAACAGTGAGAGGGCCTCTGAAACAAACAACTTTGGGCAAAAGCTTAGAGATGGAGCCAACATTAACCGTTCACTTCTAGCGCTAGCGAACTGCATCAATGCCCTTGGCAAGCAAAACAAGAAAGGTCTTGCATATGTTCCATATCGAAACAGGTATTTCCATTTTCAGGTGTATCATTCTGGAATCCATCGTTTTAAAAATCTTAGCTATATGACAATGGTACTCTGCAGCAAATTAACACGAATCCTGAAGGATGGGCTCTCTGGTAACTCTCGTACTGTTATGGTTGCTACGATATCACCAGCTGATGATCAGTATCATCACACCACCAATACACTCAAGTATGCTGATCGTGCAAAGGAGATAAAAACACATGTCCATGTAAGGGGCCATTTCTTTTAGTCTGCATAACAAATTACAAGATGCTGTGTCTATGTAGTCATCACTATTCTCACCCATGCAAAATATTTAATTGGTTCTGAATCATAAATGTGAAAAAACCAGTTCTTATGTTGTTTGTTGTCCTGTACAGAAAAACATTGGACATCTTGACACCCATGTTGAAGACTACAAAAGGATGATTGACAATCTCCAGGTTTGCCTTACTGAAAAAACACAAATGAACTTTCTACAATTCTATCAGCACTCCATCACATTAAAATATGTTCCATTATGACTTTGTAGGTTGAGGTTTCTCAGTTGAAGAAGGAATTAGCTGAGAAGGAGCATCAGTTAAGTGTAAAACCTACTGAAAAAGCTGCAGACAATGAGCTATCTTGGCTAAATATCTTGAGCCAGGAAACTGGCGAGAATGTTCAAGAACGCATTAATCTGCAGAAAGCACTGTTTGAACTTGAAGAAACCAATAAGCGCAATCGGATGGAGCTCCAGCATCTTGATGATGCAATTGCAAGACAACAGGTTGATTACTCACCTATTCAGTTTGTTGACAACTCAAAAATCTACTCTTTTACACACTGGCAGCTTACAAGCCTCTTCCAATCAGAACTCTAGTTAATACCTGTAGTGCAACATCAATAAGGGAAATACTGGTTGTCACCTTTGAGATAGCATAACTAAGAATTGTATTGTGGCATCGCAGACTGTTGCAGCTCTCTAAACCACATATGTTGTTACAATAGTATCTCAGAAATTTTCTTGCAGTGTACAGAACTCTGATGAATTTGTGTTCAGGTGAAAGATAAGGATTCGGCTGTTCTGCAAGCATTAACATCACGGAGACAAGTTATTCTTGACAACATACGCGACAATGATGAAGCTGGTGCTGGCTACAGAAAGGTATTTGTAATATAAATTCGGATTGTCCTTTGTTTTTGGTTTCCTCAAAACAAACTTATATGGCAAACACTATGTAGGATATTGAACTGAATGAGAGTCGCAAACGTCAACTCCAAGATATGATCGAGGAAGCCACCAGTAACAATGGCAACAGAACCTACCTCCACATTCTCAGTCAGTACAGACTTCTTGTGAGTAACCACCACATTTTAGTATGTTTTCCTCATAATAGTTGATACTCCACAATCTGCTTATGGATAATGTGTGTTTTAGGGGATGACTAATGCCGAGCTTCAAATTGAGATGGCTATGAGGGATCAAGTAATATATAACCAGAGGGAATCTCTAAGGAGTCTGTGGAACATTATTTATGGAACAGGGCTAAACCAGAAACAGATTTCTAAACTAGCTGCGAAGCAAGGCTTAACTATAGAAGGCTGTCCTTTGCCTGTGTCAAGTCCTGATGTTACTACCCCACCTTCCTTTTCACCCCATGGAAGGCTATCACCATTCATGTCATTTCCTAGCCCGCAATCACAGCCTTATTCCCCGTCTGCTTGCTTTGTCCAACATGGTTTCAGCACCATGTCTTATCTCAGAAATCAACATGAGACGCCTACAGTATGTAGGCAGGAGCACCTCAGTTCTTACTACATGATGTCTGAGTGCTCGCCTTTTGATGGTGATGGAAAACAGAAGACAAATGGAAGGTCAATGCCATACTTTTCTACCCCGGGAAAACCAAAAGAAATGTATAACTTTTCTCCTGGAACTGAAAGCGAGAGAACTCCCTGCAGTAAGGAATACCCCACCTCATATTCTCGCAATGGAGATTCGCGTGTACAAATAAAGGTAAACAGTCTTCCCTTATACACAAAAACAATGATTGGAAATCTGTAATGCACGTGGTCCCAAGTAGACATGGTTTTTCATGTAGTAAGAGAACCTAAAATGAAAAAGGAAGTAACATCAACTTAAATAAGCATAGCATTCCAAATGTGTAACTAGCGCACCAATTAAGGTAAAAAGAACAATGTTATCTCAAACAACAGAATATTTCAGAAGTGAAATTGCAACTTGTCTTAATCTGCAGGATTCCTGGTATACAGAAGAAAGGCAGTGAGGAAGAAAGGACATCATCAGCACTCTTCCATTGCACATTATCAGGCCGGACGTTTGCCACTGGAGCCCGTTCCTACATCTTCTGCCAACAGGCCCAACACCAATGTTACCCTGAGTTCATGAAAATGCTTCAGTTTAGATGTTAGGATATCAGCCAAAGCTGCGGCCATGAGGCCACGGCCATTTTGATCTTGATGCCTCTATGATGAACCCCAAGATGGCTCACTCCACCCTGTACAGTAGCTGTTAGTCTCCAGTCTTTCTTGAGTTTCTTCTCCTTTGTACAGTAGCTTTTCTGTAGGATGAATCCGATTTTTCAGATTGCTGTAAGCATGTAAATCTGCTGTGATTGTAACCCCTTTGCACCCATCAAATCAACAGAATTATTCCAAGATCGGTCTCAAAACACTGATGAAACAAAATGAGTACTACTTCAGCAGATATCAGCATCACTCACCACTGTTCACATCAACTTTGTGCTCTCTTCTGGAATGCAAGGCATGTGCATGTTAATTGTTCTTGCCACACTGATAAATGGATTGATCAACAGGACACATGGCCGATGGGCACAGGCATGTGTTGTGCATGGGCTGCTAGTTGTTGTTGTTGCAGGTAGGATCTCCATCTCCTCCGGATCATTCAATAACCTCCTGGGCGTCACTCACCTCACCTACTCTGGAGACCACCATTCATGTCAGCTCAGGTAAGCTGGTAAGGTAACCCACAAGCAATGGTCCCGGCCATTGCCATGCTCAATTCATTCATGCTCTCTCAGTCTGGTTGATGAATGCTACGCTGCAGCTGTAGCTGCAGCACGGCGAGCACATTGCAACTGCACCAAATGCCATATCCACAATGACAGCCAGCTGGGGCTTGTTCAGTCTGGCTACATTCTTAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013641