BGIOSGA013647

From RiceWiki
Revision as of 10:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013647| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013647, complete gene.| tag = OsI_137...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013647

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013647, complete gene.

LocusTag

OsI_13711

Ensembl Transcript ID

BGIOSGA013647-TA

Ensembl Protein ID

BGIOSGA013647-PA

Length

3163

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36320487..36323649

Sequence Coding Region

36320487..36321359,36321550..36321665,36321877..36322052,36322490..36322680,36322763..36322849
,36322948..36323105,36323199..36323409,36323500..36323649

Genome Context

<gbrowseImage1> name=IndicaChromosome03:36320487..36323649 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:36320487..36323649 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCCTCCCTTCCCGACGGCGACCGCCGCCGCCTCCACCACCTCCCACCTCGCCCTCCTCCTCCTCCTCTCATCCTCCTCCGTCTTCTTCCTCTACAAGTCCCTCCGCCTCCGCCGCAACAACCCACCATCCCCTCCTCCGGGCCAGGGCCCCGCCCCAACCCCGACCCTCCTCTACGCCTCCGCCACCGGCACCTCCAAGGCCCTCGCCGCCGGCCTCTCCCGCCGCCTCGCGGAGGCCGGCGTCACCGCCCACCCCGCCGACGCCGCGGCCTTCGACCCGGACGACCTCCCCTCCCTCCCGCTGCTGCTGCTCGTGCTCCCCACCCACGACGGCGGCGCGCCCCCTCCCGCCGCGGCCTTCCTCGCCCGCTGGCTCGAGGAGTCCGCCGCCGACTTCCGCGCGGGGGCGGCGCTGCTGTCGGGGCTCCGCTTCGCCGTCTTCGGCGTCGGGTCGCGGGCCTACGGGGAGACGTTCAACGCCGCCGCGAGGAGCTTCTCGCGGTGGCTGCGCGCGCTCGGCGCCGCCGAGGTGGTCGCCGTCGGGGAGGGTGACGTGGATGGTGGGGATCTCGAGGTCGTGTTCGAGGAGTGGTGTGGGAGGGTGGTGAGGGTGGTGAAAGGGGAGGAGATCGGAGAGGGGCACAACGGAGAGAGCGATGGCTTTGATGAGTTGGAAGAGGAGGAATCCGATGATGACGACGACGAAGAGGAGGTCGATGGCGGGGAGGTCGACATGGAGGACATTGCCGGGAAGGCACCGGCGGCAAGGAGGCGGAATGGGAAGGTGGAGGGGGCTTTGTCCAACGGAGGGGAGAATGGTGTGAGGGACATGGTCACTCCAATCATCAGGACGAGTTTAGAGAAGCAAGGTTACAAAATTATCGGTTCTCATAGTGGGGTGAAGATTTGTAGATGGACAAAGTCACAACTCCGAGGCCGCGGAGGGTGTTACAAGCACTCATTTTATGGCATAGAAAGTCACAGATGTATGGAGGCAACTCCAAGTCTGGCCTGTGCAAATAAGTGTGTGTTTTGTTGGAGGCATCACACAAATCCTGTTGGGAAGAGTTGGAAATGGAAGATGGATGATCCTCTCGACATTGTTAATGCTGCAATTGATCAACACACAAAGATGGTTAAGCAGATGAAAGGGGTACCAGGAGTAAAGCCAGAGAGGCTGGCAGAGGGTCTATCTCCTAGACATTGTGCATTATCTCTGGTCGGGGAACCGATTATGTATCCAGAGATAAATGTTCTGATCGATGAGCTACACCGCAGACACATATCTACATTTCTTGTCACTAATGCACAGTTTCCTGATAAGATTAAGACACTGAAACCAATCACTCAGCTGTATGTCAGTGTGGATGCAGCTACAAAGGAAAGCTTGAAAGCTGTCGACAGACCATTATTTTCAGACTTCTGGGAGCGTTTTCTGGATTCACTGAAGTCACTGCATGACAAAGATCAACGAACTGTCTACCGGCTGACATTGGTTAAAGGCTGGAATGCAGAAGAGATAGATGGTTATGCAAAGTTACTAAGCCTTGGCCAACCCGATTTCATTGAAATCAAGGGTGTGACATATTGTGGCTCGTCAGCAACTTCCAAGTTAACGATGGAAAATGTCCCCTGGCACTCTGATGTAAAAGATTTCTCAGAGGCTTTGGCATTAAAAAGCGGTGGCGTGTATGAAGTAGCTTGTGAGCATGCTCATTCATGCTGTGTTCTACTTGCAAAGGTGGATAAGTTCAAGATCAACGGAAAATGGCATACCTGGATAGATTATGATCGATTCCATGAACTGGTGACATCCGGAAAGCCTTTTAGGAGCCAAGATTACATGGCTCTCACACCTTCCTGGGCTGTCTATGGTGCAGAGGAAGGTGGCTTTGATCCAGATCAATCTCGTTACAAGAAAGAAAGACGTCATGGTGCAGCAGCGCTCAAAGACTAA</cdnaseq>

Protein Sequence

<aaseq>MPPPFPTATAAASTTSHLALLLLLSSSSVFFLYKSLRLRRNNPPSPPPGQGPAPTPTLLYASATGTSKALAAGLSRRLAEAGVTAHPADAAAFDPDDLPSLPLLLLVLPTHDGGAPPPAAAFLARWLEESAADFRAGAALLSGLRFAVFGVGSRAYGETFNAAARSFSRWLRALGAAEVVAVGEGDVDGGDLEVVFEEWCGRVVRVVKGEEIGEGHNGESDGFDELEEEESDDDDDEEEVDGGEVDMEDIAGKAPAARRRNGKVEGALSNGGENGVRDMVTPIIRTSLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWKWKMDDPLDIVNAAIDQHTKMVKQMKGVPGVKPERLAEGLSPRHCALSLVGEPIMYPEINVLIDELHRRHISTFLVTNAQFPDKIKTLKPITQLYVSVDAATKESLKAVDRPLFSDFWERFLDSLKSLHDKDQRTVYRLTLVKGWNAEEIDGYAKLLSLGQPDFIEIKGVTYCGSSATSKLTMENVPWHSDVKDFSEALALKSGGVYEVACEHAHSCCVLLAKVDKFKINGKWHTWIDYDRFHELVTSGKPFRSQDYMALTPSWAVYGAEEGGFDPDQSRYKKERRHGAAALKD</aaseq>

Gene Sequence

<dnaseqindica>1..873#1064..1179#1391..1566#2004..2194#2277..2363#2462..2619#2713..2923#3014..3163#ATGCCTCCTCCCTTCCCGACGGCGACCGCCGCCGCCTCCACCACCTCCCACCTCGCCCTCCTCCTCCTCCTCTCATCCTCCTCCGTCTTCTTCCTCTACAAGTCCCTCCGCCTCCGCCGCAACAACCCACCATCCCCTCCTCCGGGCCAGGGCCCCGCCCCAACCCCGACCCTCCTCTACGCCTCCGCCACCGGCACCTCCAAGGCCCTCGCCGCCGGCCTCTCCCGCCGCCTCGCGGAGGCCGGCGTCACCGCCCACCCCGCCGACGCCGCGGCCTTCGACCCGGACGACCTCCCCTCCCTCCCGCTGCTGCTGCTCGTGCTCCCCACCCACGACGGCGGCGCGCCCCCTCCCGCCGCGGCCTTCCTCGCCCGCTGGCTCGAGGAGTCCGCCGCCGACTTCCGCGCGGGGGCGGCGCTGCTGTCGGGGCTCCGCTTCGCCGTCTTCGGCGTCGGGTCGCGGGCCTACGGGGAGACGTTCAACGCCGCCGCGAGGAGCTTCTCGCGGTGGCTGCGCGCGCTCGGCGCCGCCGAGGTGGTCGCCGTCGGGGAGGGTGACGTGGATGGTGGGGATCTCGAGGTCGTGTTCGAGGAGTGGTGTGGGAGGGTGGTGAGGGTGGTGAAAGGGGAGGAGATCGGAGAGGGGCACAACGGAGAGAGCGATGGCTTTGATGAGTTGGAAGAGGAGGAATCCGATGATGACGACGACGAAGAGGAGGTCGATGGCGGGGAGGTCGACATGGAGGACATTGCCGGGAAGGCACCGGCGGCAAGGAGGCGGAATGGGAAGGTGGAGGGGGCTTTGTCCAACGGAGGGGAGAATGGTGTGAGGGACATGGTCACTCCAATCATCAGGACGAGTTTAGAGAAGCAAGTGAGGATCATATTTCTCTACATTTTACGATTGATACATAATGTGCAATTCCAGTTAAGCTTTAGGGCCACATGGAATATCTTGATCACATATGTTCACATCAGTTATGAGTGTTAAGCATGCTTAGTGTAGATGGGTAACATCTATTGGTCTTAACTGTAATCCAAATCTACCCCTTCATTTGTTTCAGGGTTACAAAATTATCGGTTCTCATAGTGGGGTGAAGATTTGTAGATGGACAAAGTCACAACTCCGAGGCCGCGGAGGGTGTTACAAGCACTCATTTTATGGCATAGAAAGTCACAGGTGAAAATTTTGTTTCTGTAGCATTGTAGCAATGTATGCAGAAGGCTTGTTAGATGGTAGCTGCAGTTTCGCTATGTTTATCTTTGTTAATATTTTGCCACTTAGAACCTTGGATATTGTAGAAGAATCATAATTTATATTATGAGAAAATAATACTACGTAGACGTCCTTGATTGCTTATCTTATTTTCTATTTTTGCTCATTTTGGCAGATGTATGGAGGCAACTCCAAGTCTGGCCTGTGCAAATAAGTGTGTGTTTTGTTGGAGGCATCACACAAATCCTGTTGGGAAGAGTTGGAAATGGAAGATGGATGATCCTCTCGACATTGTTAATGCTGCAATTGATCAACACACAAAGATGGTTAAGCAGATGAAAGGGGTACCAGGTATGTATGTATCTAAAGTCCTATGTAAATATTCATGATGGTGAAAATGCCTTACATATTGTTACTACCCAAAAATAAGTTAAATGCCTTACATACTGTTACTACCAAAAAATAAGTTAAATCCATGGAAAATCAAGCTGTGACCATTCCATTGCCTGCAAGTTTTACTTGCCTATATGGAAAACAACCTGAACAGGATTCCAACACATATTCTCGCATCAATCATGTCAAAATGCTCCAGTAAGGGATGTCTGCATTTATCAGACGTGAAGCTTCTAAATTTTGCTTTTATGAACACAGCCTTGCAAGAAAACTATGATGCAAAATTTCTGGCAAGAAAATTGGTTTGCCAGTCATGATGGATCTGCAAGCAATATTACTGCAGTCTTTCTTGGCTAAAAATAAAAATGCTGAATTGCTGATCCATGCTTTTTCAGGAGTAAAGCCAGAGAGGCTGGCAGAGGGTCTATCTCCTAGACATTGTGCATTATCTCTGGTCGGGGAACCGATTATGTATCCAGAGATAAATGTTCTGATCGATGAGCTACACCGCAGACACATATCTACATTTCTTGTCACTAATGCACAGTTTCCTGATAAGATTAAGACACTGAAACCAATCACTCAGGTCATATTCGAATTAAGATCTATTTTGGCGTTTAAGTGCTCGGAGCAACAAGCTTTAAAAATATCTGTTTGTATGGTTGCAGCTGTATGTCAGTGTGGATGCAGCTACAAAGGAAAGCTTGAAAGCTGTCGACAGACCATTATTTTCAGACTTCTGGGAGCGTTTTCTGGTAATGCAAAAATACTTCCAGATGCACATCATGAACACAAGGTTTGCATATACTGATCTGTATTGTTTTTCGTGCTATTTACCTTGATGTGGCCCTAGGATTCACTGAAGTCACTGCATGACAAAGATCAACGAACTGTCTACCGGCTGACATTGGTTAAAGGCTGGAATGCAGAAGAGATAGATGGTTATGCAAAGTTACTAAGCCTTGGCCAACCCGATTTCATTGAAATCAAGGGTGTGACATATTGTGGCTCGTAAGTGCCTTATAATCTTCTTTCATGTGGATTGCAGCCTGTCTCTTCAGTTGCTTGTTTAACTACCTTATATTTTGTGACAAATGCTTTCAGGTCAGCAACTTCCAAGTTAACGATGGAAAATGTCCCCTGGCACTCTGATGTAAAAGATTTCTCAGAGGCTTTGGCATTAAAAAGCGGTGGCGTGTATGAAGTAGCTTGTGAGCATGCTCATTCATGCTGTGTTCTACTTGCAAAGGTGGATAAGTTCAAGATCAACGGAAAATGGCATACCTGGATAGATTATGATCGATTCCATGAACTGGTGAGCTTTTCCTCAAGAATAACTAGTAGTCTAGTATGCAACATAGACAAGAAGACAATTCATGTATCTCAATTGGCTTCACCAATGCAGGTGACATCCGGAAAGCCTTTTAGGAGCCAAGATTACATGGCTCTCACACCTTCCTGGGCTGTCTATGGTGCAGAGGAAGGTGGCTTTGATCCAGATCAATCTCGTTACAAGAAAGAAAGACGTCATGGTGCAGCAGCGCTCAAAGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013647

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013647&oldid=58470"