BGIOSGA013650

From RiceWiki
Revision as of 10:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013650| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013650, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013650

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013650, complete gene.

LocusTag

OSJNBA0070N04.4

Ensembl Transcript ID

BGIOSGA013650-TA

Ensembl Protein ID

BGIOSGA013650-PA

Length

3330

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36338258..36341587

Sequence Coding Region

36338258..36338399,36338633..36338727,36338831..36340672,36340755..36340869,36340950..36341587

Genome Context

<gbrowseImage1> name=IndicaChromosome03:36338258..36341587 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:36338258..36341587 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAAGGTGCCTGATCTCGGCTCCGACTTCGCCCAGAAGCTGCTGCTCGACCTCCGGCGCCGCCGCGAGAGGCTCGGCTTCGACTCGCCGGCGCCGCCGCAGCGCACGTCGTCGTCCAACGCCGCCGTTCTTCCTCGAGATTCTCATTCGAGTTCTCAGAGGCCACATCGAAGCCAGAAGCCACAACAAGCAGCTCCTCGAGCAGGAAGAGCAGAAGCAACAGCAAACAGATCACACCCACAGAGCGGCAATGCCATTGCCGGAGCCGGCAAGCCGCGCCACCGCGCCACGCCGGTCGCCAATTCGCACCAAATCGTGCCATTCCAAGGAGGAGGCAGCGCCAAGCAGAAGCCCGCGAACAGCAGCATCGACGTGCAGATGGCGCTGGCAATCGCTCTCAGCAACAGAGGCAAGCTCCAGAACATCGAGCTCGTGTCGCGCAACGGCTCCATCTTCTTCAGGGACACGGATCACGCCATGCCGGAGAGCCACCTCGTGTCGCCCAGCGCGCACGTCGGCAAGGTGGCGATCGGCGTCAAGAAGCTCAATGACATCCTCATGGCGTACTCATCGGGCGGCGGCGCGAGGGACACGGGCAGGAGGAGCTCGGTTGACATTGGGAGGGAGCTCTTCGGAGGAGCCATGGATTTGGAGGAGTCACTAAGCATGCTTGTGATGCTTCAGGAGGCATCAGATTACATGGAAGGATCCGGGAATGGCAAGGTGTTGCTACTGGAGGGCAAGGAAAACTTGAAGAACTCGGCGCGTTCGCCGAGTTCCGCAAGGCTGGTGGAGATTGTTGATGAGGATTCAGAGGCCGAGCAAGCCAAGAACTCGAAGAGTCTGTCAATGCAGATAGTTCCTCACAAGAATTCACAAGGTTTCAGTACTCCAAACAGCTCATCAGTCTTGCAGGTCTCTACTGTTACAGGCAACAATTCCAGGAGCAATGCTTCTAAAGCTGACAAGGATGATGCAAAAGTCAGGATGCCTAATGTGATTGCCAAGCTGATGGGATTAGACAATCTTCCATCAACCAAGGTAGCAAACAAGGGCATGGAGAAGTTTGTGAAACCTGAAGCATTGTCAAGAAAGGATAGGAGGACGAATTTGGTCGGCGGCAGATTGCCGATTCAGATTATAGGTTCAGAAAGGGTGTCATCCAAAGGACACAACATGAATTTGCTGCCAGGTGAGTGGAAGATTGGCCTGAAAAATTATGAAGTATACAAAAGTGCTAATTTGCAGGTGTCTAATAGTTCATCGATTCCTGCGGCTGATAAGCAAACAAGGCAAACCATGAGACAAATGTTAAGCAAAATGGAGAATGCAGAGAGAAGAGGTAGTCTAGGACAACAACTCCATGAGGAGAAGAAACTGACTGAAGAAACTAATCAGCAGAAGGTTGCGAATGTTGGATGCCGCACCGATGCAGGGAAAAAGATGGATTTTCTGAAAAGAATTAGGAAAATTTCAGGCAGCAGACAAGTCACTGAAGAGAAGCACATTATTCAAGAAGAGAGCACAACAGGGAAGAAGCAAACTACAAGCATGAAACAATTGCTGGGCACAGACAGTGAGGATAAATCTAAGATAACTAGAGTTAAGTTTAACAAGGAAAACCTTGCCACTACTGAAATCAAGAATGCAGCAAGAGGGAAGAACGGCAAAACAGATCAACGGAAGCGGCAATCATACAATAAACAGACAGATGTACATAGCATGCCAAAGAAATCTCAGAAATATCGTGAAATGAAGAGTAAAGAAGGCATTCAGAACTTAGAGCACAAGAGGTCAACAAAGTCAGAAGCGACACAATTTAAAATTCTCCCATATACTGCAGAGATACAGCAAGAGAATGGAAAGCATGAAGAAGATAATGATATTGTCAAGCCATCAGATAGCCATGGGGATGGAGGTATTTCTGAGCAATTTGCAGGAATGGTGGAAGACAGCAGAACAACTGGAATGGCTTCCCCAGACCAATTTATGAAGCAAATAACTGAAGTGACCTCAATTGATGTGCATGCAAGTGATAGATCAAATGTGGTAGATCAGAGTGTAACTCAAACAAATGATGACACAAGTTCTAATACAGCTAGTGAAACTACACAAACACCAGAGACATTCACAGAGGGGGAACATCACCAAAATCTGCAATTAGTGGAGTTTAAAGAGAAACCGTTGGATGATTTGGGTGATGCCAAAGAGACCAGCAATCCAACGGATTTGCAAGACCAAAAGATGCATGTGGTCTCGTGTGATTCATTCACAGAGAATCAGCTACTGCTTATGAGAATGTTGCTAAAGGATCAATACTTGCTTGAAACTGCAAAGGCTCTTGTCAGAAATCCTGTCCCTGTACATTTTGTCAATGCCAGTGCAGATAGATGGTCAGAGAAAGGCAGCTCTCTTTTTTCAGATATAGCGCGGGAAGTTATCAGAAAGAAAGGTAAAAGAACTGAGGCAATTGTAGAAGTTAGCATGGCAAACACAACTAACATGAAATTGCAATACTTGGATGATCTTATCATGGAACTGGATGGAGATATTGAGAGCCTGAACATCTCCAAGAAATCTCAACATCTGGGTGAAGATTGCACAGCTGAAAATTTGCGAATGATACTTCACAGGGACATGCAAAACAATCATCCGGATGCTAACTCGATGTGGGATTTCGGTTGGAACCGCATTTCTGACCTTCCGATTGAGAGAAATGAAGTCGTCAGGGATTTGGAGAAGAACATATTGGGTGGCATGATCACAGATGTAGCAAGGGAGCTAATTGAATTATCAGTACGCCATGGGTGCTGTGCCTGTGAGGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MAKVPDLGSDFAQKLLLDLRRRRERLGFDSPAPPQRTSSSNAAVLPRDSHSSSQRPHRSQKPQQAAPRAGRAEATANRSHPQSGNAIAGAGKPRHRATPVANSHQIVPFQGGGSAKQKPANSSIDVQMALAIALSNRGKLQNIELVSRNGSIFFRDTDHAMPESHLVSPSAHVGKVAIGVKKLNDILMAYSSGGGARDTGRRSSVDIGRELFGGAMDLEESLSMLVMLQEASDYMEGSGNGKVLLLEGKENLKNSARSPSSARLVEIVDEDSEAEQAKNSKSLSMQIVPHKNSQGFSTPNSSSVLQVSTVTGNNSRSNASKADKDDAKVRMPNVIAKLMGLDNLPSTKVANKGMEKFVKPEALSRKDRRTNLVGGRLPIQIIGSERVSSKGHNMNLLPGEWKIGLKNYEVYKSANLQVSNSSSIPAADKQTRQTMRQMLSKMENAERRGSLGQQLHEEKKLTEETNQQKVANVGCRTDAGKKMDFLKRIRKISGSRQVTEEKHIIQEESTTGKKQTTSMKQLLGTDSEDKSKITRVKFNKENLATTEIKNAARGKNGKTDQRKRQSYNKQTDVHSMPKKSQKYREMKSKEGIQNLEHKRSTKSEATQFKILPYTAEIQQENGKHEEDNDIVKPSDSHGDGGISEQFAGMVEDSRTTGMASPDQFMKQITEVTSIDVHASDRSNVVDQSVTQTNDDTSSNTASETTQTPETFTEGEHHQNLQLVEFKEKPLDDLGDAKETSNPTDLQDQKMHVVSCDSFTENQLLLMRMLLKDQYLLETAKALVRNPVPVHFVNASADRWSEKGSSLFSDIAREVIRKKGKRTEAIVEVSMANTTNMKLQYLDDLIMELDGDIESLNISKKSQHLGEDCTAENLRMILHRDMQNNHPDANSMWDFGWNRISDLPIERNEVVRDLEKNILGGMITDVARELIELSVRHGCCACEA</aaseq>

Gene Sequence

<dnaseqindica>1..142#376..470#574..2415#2498..2612#2693..3330#ATGGCCAAGGTGCCTGATCTCGGCTCCGACTTCGCCCAGAAGCTGCTGCTCGACCTCCGGCGCCGCCGCGAGAGGCTCGGCTTCGACTCGCCGGCGCCGCCGCAGCGCACGTCGTCGTCCAACGCCGCCGTTCTTCCTCGAGGTACGTTGTGTTCCCCACCTTCTTTGAGTTCGTCCTCTCTGAATTCTGAATTCTGAAGAATTCATGTTCAGATATCAGTCGTGGAGATAATTTTTTTTTTGTCAGTGAGATAAACTCTGTCCTTTTATTTTTGCTAATTATTTTTCCAATGGCACGCGAAATTACGATGAACAGTAAATTTTCTTGAAACTGAACATACTGCAGAAGTTCTGAAATTGCACTCGTCTGTACAGATTCTCATTCGAGTTCTCAGAGGCCACATCGAAGCCAGAAGCCACAACAAGCAGCTCCTCGAGCAGGAAGAGCAGAAGCAACAGCAAACAGATCAGTAAGCAAAGAATTCCAAACGATACTCACCAATCTGCTCCCAAATTCATCTCCCATTTCACTTTTTTCTAGCTTTCTTTACCCAATTTGCTCTGTGATCACAGCACCCACAGAGCGGCAATGCCATTGCCGGAGCCGGCAAGCCGCGCCACCGCGCCACGCCGGTCGCCAATTCGCACCAAATCGTGCCATTCCAAGGAGGAGGCAGCGCCAAGCAGAAGCCCGCGAACAGCAGCATCGACGTGCAGATGGCGCTGGCAATCGCTCTCAGCAACAGAGGCAAGCTCCAGAACATCGAGCTCGTGTCGCGCAACGGCTCCATCTTCTTCAGGGACACGGATCACGCCATGCCGGAGAGCCACCTCGTGTCGCCCAGCGCGCACGTCGGCAAGGTGGCGATCGGCGTCAAGAAGCTCAATGACATCCTCATGGCGTACTCATCGGGCGGCGGCGCGAGGGACACGGGCAGGAGGAGCTCGGTTGACATTGGGAGGGAGCTCTTCGGAGGAGCCATGGATTTGGAGGAGTCACTAAGCATGCTTGTGATGCTTCAGGAGGCATCAGATTACATGGAAGGATCCGGGAATGGCAAGGTGTTGCTACTGGAGGGCAAGGAAAACTTGAAGAACTCGGCGCGTTCGCCGAGTTCCGCAAGGCTGGTGGAGATTGTTGATGAGGATTCAGAGGCCGAGCAAGCCAAGAACTCGAAGAGTCTGTCAATGCAGATAGTTCCTCACAAGAATTCACAAGGTTTCAGTACTCCAAACAGCTCATCAGTCTTGCAGGTCTCTACTGTTACAGGCAACAATTCCAGGAGCAATGCTTCTAAAGCTGACAAGGATGATGCAAAAGTCAGGATGCCTAATGTGATTGCCAAGCTGATGGGATTAGACAATCTTCCATCAACCAAGGTAGCAAACAAGGGCATGGAGAAGTTTGTGAAACCTGAAGCATTGTCAAGAAAGGATAGGAGGACGAATTTGGTCGGCGGCAGATTGCCGATTCAGATTATAGGTTCAGAAAGGGTGTCATCCAAAGGACACAACATGAATTTGCTGCCAGGTGAGTGGAAGATTGGCCTGAAAAATTATGAAGTATACAAAAGTGCTAATTTGCAGGTGTCTAATAGTTCATCGATTCCTGCGGCTGATAAGCAAACAAGGCAAACCATGAGACAAATGTTAAGCAAAATGGAGAATGCAGAGAGAAGAGGTAGTCTAGGACAACAACTCCATGAGGAGAAGAAACTGACTGAAGAAACTAATCAGCAGAAGGTTGCGAATGTTGGATGCCGCACCGATGCAGGGAAAAAGATGGATTTTCTGAAAAGAATTAGGAAAATTTCAGGCAGCAGACAAGTCACTGAAGAGAAGCACATTATTCAAGAAGAGAGCACAACAGGGAAGAAGCAAACTACAAGCATGAAACAATTGCTGGGCACAGACAGTGAGGATAAATCTAAGATAACTAGAGTTAAGTTTAACAAGGAAAACCTTGCCACTACTGAAATCAAGAATGCAGCAAGAGGGAAGAACGGCAAAACAGATCAACGGAAGCGGCAATCATACAATAAACAGACAGATGTACATAGCATGCCAAAGAAATCTCAGAAATATCGTGAAATGAAGAGTAAAGAAGGCATTCAGAACTTAGAGCACAAGAGGTCAACAAAGTCAGAAGCGACACAATTTAAAATTCTCCCATATACTGCAGAGATACAGCAAGAGAATGGAAAGCATGAAGAAGATAATGATATTGTCAAGCCATCAGATAGCCATGGGGATGGAGGTATTTCTGAGCAATTTGCAGGAATGGTGGAAGACAGCAGAACAACTGGAATGGCTTCCCCAGACCAATTTATGAAGCAAATAACTGAAGTGACCTCAATTGATGTGCATGCAAGTGATAGATCAAATGTGGTAGATCAGAGTGTAACTCAAACAAATGTAAGTTTGTCATCCTGCATAAATACTTTGTGCACCCATCATATCAGTCTAATGAAATGTGTTTTCTTTTCTGCAAGTGCAGGATGACACAAGTTCTAATACAGCTAGTGAAACTACACAAACACCAGAGACATTCACAGAGGGGGAACATCACCAAAATCTGCAATTAGTGGAGTTTAAAGAGAAACCGTTGGATGGTATCATATTCTTGACCAGTTTCTGTTAAATGAACTTTTGAAAATCTACTGCATGTATAACACTGAATGCTTTATTACAGATTTGGGTGATGCCAAAGAGACCAGCAATCCAACGGATTTGCAAGACCAAAAGATGCATGTGGTCTCGTGTGATTCATTCACAGAGAATCAGCTACTGCTTATGAGAATGTTGCTAAAGGATCAATACTTGCTTGAAACTGCAAAGGCTCTTGTCAGAAATCCTGTCCCTGTACATTTTGTCAATGCCAGTGCAGATAGATGGTCAGAGAAAGGCAGCTCTCTTTTTTCAGATATAGCGCGGGAAGTTATCAGAAAGAAAGGTAAAAGAACTGAGGCAATTGTAGAAGTTAGCATGGCAAACACAACTAACATGAAATTGCAATACTTGGATGATCTTATCATGGAACTGGATGGAGATATTGAGAGCCTGAACATCTCCAAGAAATCTCAACATCTGGGTGAAGATTGCACAGCTGAAAATTTGCGAATGATACTTCACAGGGACATGCAAAACAATCATCCGGATGCTAACTCGATGTGGGATTTCGGTTGGAACCGCATTTCTGACCTTCCGATTGAGAGAAATGAAGTCGTCAGGGATTTGGAGAAGAACATATTGGGTGGCATGATCACAGATGTAGCAAGGGAGCTAATTGAATTATCAGTACGCCATGGGTGCTGTGCCTGTGAGGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013650