BGIOSGA013652

From RiceWiki
Revision as of 10:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013652| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013652, complete gene.| tag = OS06G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013652

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013652, complete gene.

LocusTag

OS06G0256500

Ensembl Transcript ID

BGIOSGA013652-TA

Ensembl Protein ID

BGIOSGA013652-PA

Length

6057

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36349013..36355069

Sequence Coding Region

36349013..36349063,36349202..36349278,36349362..36349443,36349547..36349594,36349868..36350023
,36350102..36350198,36350297..36350339,36350742..36350809,36350911..36350995
,36351069..36351117,36351338..36351410,36351480..36351540,36352188..36352254
,36352326..36352382,36352480..36352533,36352625..36352753,36353256..36353319
,36353426..36353499,36353585..36353638,36353743..36353811,36354530..36354619
,36354785..36354892,36355022..36355069

Genome Context

<gbrowseImage1> name=IndicaChromosome03:36349013..36355069 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:36349013..36355069 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGTCGGCGCTCATCTGCGACACCGAGCAGTGGAAGGGCCTCCAGGCGCATGTTGGGGAGATTCAGAAAACGCACCTGCGCCATCTGATGCATGATGTTGAGCGCTGCAAGGCAATGACAGCTGAGTATGAAGGCATATATCTGGATTACTCGAGGCAGCGTGCGACTGGCGAAACCATGGAGAAGCTGTTTAAATTGGCCGAGGCTGCAAAGCTCAAGGAGAAGATTGAGAAGATGTTTAGAGGTGACAAGATAAATAGCACAGAGAACAGATCAGTGCTTCATGTAGCTCTAAGGGCTCCAAGAGACGAAGTAATAAATAGCAATCGGGTCAATGTGGTTCCCGAAGTTTGGGGTGTAAAAGATAAAATCAAGCAATTTTCAGAAACTTTTAGGAGTGGATCATGGGTTGGGGCAACTGGTAAAGCATTGACAAATGTTGTGTCAGTAGGAATAGGTGGTAGCTTTCTTGGTCCTCTGTTTGTGCATGCTGCCCTCCAGACAGATCCAGAAGCTGCAGAATCTGCCAAAGGGCGGCAATTAAGATTTCTTGCAAATGTCGACCCTGTTGATGTTGCACGAAGCATCAAAGATTTAGATCCTGAAACAACACTTGTTGTGGTAGTCTCAAAGACCTTCACAACAGCTGAAACAATGTTAAATGCTCGAACTCTTAAGGAGTGGATTGTCTCTTCTCTTGGACCTGATGCTGTTGCAAAACATATGATTGCTGTCAGTACCAATCTTGAGCTTGTGGAGAAGTTCGGAATTGACCCGAAAAATGCTTTTGCATTTTGGGACTGGGTTGGTGGCCGCTATAGTGTTTGCAGTGCTGTTGGTGTCCTGCCCTTATCTCTTCAGTATGGCTTTCCGATTGTTCAGAAATTTTTGGAGGGTGCAGCCAGCATCGACAAACACTTTCGTTCATCTTCATTTGAGAAAAATATTCCTGTACTCCTTGGTTTGCTGAGTGTGTGGAATGTTTCATTTCTCGGATATCCAGCTAGAGCAATACTGCCCTATTCCCAAGCACTTGAGAAATTTGCACCGCATATTCAGCAGCTTAGCATGGAGAGTAATGGAAAGGGTGTCTCCATTGATGGTGTTCAACTGCCCTTTGAGAGTGGTGAAATTGATTTTGGTGAACCTGGAACCAATGGGCAACACAGCTTCTATCAATTAATCCATCAGGGAAGAGTTATTCCTTGTGATTTTATCGGTGTCGTAAAAAGCCAGCAACCTGTTTACTTGAAAGGGGAAATTGTGAGCAATCATGACGAATTGATGTCCAATTTCTTTGCTCAGCCTGATGCGCTTGCTTATGGAAAGACTCCTGAACAACTGCATAGCGAGAAAGTACCTGAACATCTTATCCCTCATAAGACTTTTCAGGGCAACCGACCATCGCTTAGTTTATTGCTGCCCTCATTATCTGCTTATGAGATTGGACAGCTTTTAGCCATCTACGAGCACCGGATTGCAGTCCAGGGTTTCCTATGGGGAATAAACTCATTTGACCAGTGGGGAGTGGAACTGGGCAAGTCTCTTGCCTCTCAAGTGAGAAAATCTCTACATGCATCCCGCGTTGAAGGAAAGCCTGTCCTGGGGTTTAACAGCAGTACTACAAGTTTGCTGACACGATATCTTGCTGTTGAGCCATCCACTCCTTACAACACTACCACACTGCCGAAAGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MASSALICDTEQWKGLQAHVGEIQKTHLRHLMHDVERCKAMTAEYEGIYLDYSRQRATGETMEKLFKLAEAAKLKEKIEKMFRGDKINSTENRSVLHVALRAPRDEVINSNRVNVVPEVWGVKDKIKQFSETFRSGSWVGATGKALTNVVSVGIGGSFLGPLFVHAALQTDPEAAESAKGRQLRFLANVDPVDVARSIKDLDPETTLVVVVSKTFTTAETMLNARTLKEWIVSSLGPDAVAKHMIAVSTNLELVEKFGIDPKNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFPIVQKFLEGAASIDKHFRSSSFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQLSMESNGKGVSIDGVQLPFESGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVYLKGEIVSNHDELMSNFFAQPDALAYGKTPEQLHSEKVPEHLIPHKTFQGNRPSLSLLLPSLSAYEIGQLLAIYEHRIAVQGFLWGINSFDQWGVELGKSLASQVRKSLHASRVEGKPVLGFNSSTTSLLTRYLAVEPSTPYNTTTLPKV</aaseq>

Gene Sequence

<dnaseqindica>1..51#190..266#350..431#535..582#856..1011#1090..1186#1285..1327#1730..1797#1899..1983#2057..2105#2326..2398#2468..2528#3176..3242#3314..3370#3468..3521#3613..3741#4244..4307#4414..4487#4573..4626#4731..4799#5518..5607#5773..5880#6010..6057#ATGGCGTCGTCGGCGCTCATCTGCGACACCGAGCAGTGGAAGGGCCTCCAGGTGCGTGGATTGATGGCTCTGTTATCATACGCGCGCGAAGCTTTGAGTGCTCGCATTGCTGCCGCTTTTATTCGATGTATATGCTTCGATTAGATTGGTAAAGCTCACTATGATTTCGTGTTTTGGTGCGGGGAGCAGGCGCATGTTGGGGAGATTCAGAAAACGCACCTGCGCCATCTGATGCATGATGTTGAGCGCTGCAAGGCAATGACAGCGTAAGGGTTGAATTCTTTTTTCTGCTGTTGCATTGCATGTGTTGGTTTCTGCTTTCGTTTCTCAGGTGCTTGTTGATTGACAGTGAGTATGAAGGCATATATCTGGATTACTCGAGGCAGCGTGCGACTGGCGAAACCATGGAGAAGCTGTTTAAATTGGCCGAGGTGAGACCTGTTTGATGTATTATGGTTTTGGTGTCATTTATATGGTGGGGTTGGTCTTCCTGAATAGTAATTTGGGATAATATCCCTATCCAATTTATTGTAGGCTGCAAAGCTCAAGGAGAAGATTGAGAAGATGTTTAGAGGTGACAAGGTAAGCATCATGACCTGCAAAAGATGTTCAGTCTCCTGAGGGGGACGTTTATTCAGTAATTTCATCATATTTAAAGAGAGTGCCTTTCCATGAACACTGGGTACACATAGCTTGCATGTAATTTTGCTTAGTAAAAAGCTTGACTAGTTGTTCTGAGATCTGATGCATAATTTAGTATTAACGTTTGGACTATTTTTAAGTTTCCCATTCCATATACATTGTTTGAAGTTGCTGTGATGCATTTGTAACATTACTTGATTTCTTTTTTCTTAGATAAATAGCACAGAGAACAGATCAGTGCTTCATGTAGCTCTAAGGGCTCCAAGAGACGAAGTAATAAATAGCAATCGGGTCAATGTGGTTCCCGAAGTTTGGGGTGTAAAAGATAAAATCAAGCAATTTTCAGAAACTTTTAGGAGTGGATCATGGGTAAGTTGAAGATTTTCTTGCACTCACCAAATGTTTTTGAACACCGAAGATTGATTACTGCTATTATTTATACTGTAGGTTGGGGCAACTGGTAAAGCATTGACAAATGTTGTGTCAGTAGGAATAGGTGGTAGCTTTCTTGGTCCTCTGTTTGTGCATGCTGCCCTCCAGACAGGTGAACTTTTTATACTGTTCATTCTTATGTTCTCCAGACTCTGACTGTTTACCGAAAATTATGATCTGGCGAACCCTGAAAGTCTTGCTAAATTTCAGATCCAGAAGCTGCAGAATCTGCCAAAGGGCGGCAATTAAGATTGTAAGTGTGTATGACAGGTTTTCAAATGTAATGTGCTGCCAAACAGCAATTCTATTCAATGCTTTGTGAACTGTATGTTTCTGCGGCATATTTCTAATACTAATGTGAACACCATTTGTTCCAGCAATTTGTTCTACTGGGTCATAGTATTACCTCTGCCTTTATGTCTTCTCAGTAATTTGTTCCAGCAGTTTTTACTTTGTGAAATCAGTCACGATTCCTGTTAGATCTTGTTCTTCTATGCTATATAGGGTCTTGTGCTATGCTGAGTACTTTAATTTACACTAATCTTAATCTGGATGATGTTTTACTGTTTCTATTATTCAGTTTCCATATTTTTATATCACTCATGCACAATGCTTTTCATCGATTAATTTATATGTAATTTTGGTTATCTTGTAGTCTTGCAAATGTCGACCCTGTTGATGTTGCACGAAGCATCAAAGATTTAGATCCTGAAACAACACTTGGTAATCACCATGTTTTGCTCTTTCATACTAACACTCAGTATAGGTGTTCTGTCAGACATTACGAATATCTGCAGAAGTTTTAATTGTGTAAAAACTTGCAGTTGTGGTAGTCTCAAAGACCTTCACAACAGCTGAAACAATGTTAAATGCTCGAACTCTTAAGGAGTGGATTGTCTCTTCTCTTGGGTTAGTTTATTAGCACCTGAAACACCTTTCGGGTCCATTATCATCGTGACTGATCCTAAATGTATTGATTCAGACCTGATGCTGTTGCAAAACATATGATTGCTGTCAGTACCAATCTTGAGGTACTTCTGGAGCTTTTATTTTTCGATTCAAATTTCACTTGATCTAATCTATTTTCTGCATTCTAAATTACGTCACATTTGGATTATAAATTGTGTTGAACTTGCATCGTTGACATGTTCAGCTATTATGCTTTCATACTACAAATGTAGTGTTATTCATCAATGTACTGTTTATCGTAATATGATGAAATTTCATCTATACATTTTTCTTGTTTTGAAGCTTGTGGAGAAGTTCGGAATTGACCCGAAAAATGCTTTTGCATTTTGGGACTGGGTTGGTGGCCGCTATAGTGGTGAGAATTTTTTCAATTAAAAAATATGCATACCTTATGTTTGTTTGTAACTTTAATCTTATGTTGCAGTTTGCAGTGCTGTTGGTGTCCTGCCCTTATCTCTTCAGTATGGCTTTCCGATTGTTCAGAAGTATGCTATCTATTCATAAATGTCTACTTTTTTTAATTACAAATAGATAATACAATACCGTTAGGAGTTCAAATTTGCAGCATAGGATCAATTTCATTACTATAAAATAATTTGTTGTTTTCTTTGGCTCTCTTGTGTTTGCAATACACATATTATGCTAGAGTCTTTGAAAAACAATGGCACTGTGGCACTAAACAATGATATACTAGAAACAGAAAAGCTTATAGCATGATAATAATACTGCAGACTTATCTTACCGATAGGTGAGTGCTAATAACTATACCTATTTTCAAGTTCTAGGAAAAGATTTGTTAAATCAGGATACCCTTTTGCATTGTTTCATACTTCATATACGTATCACTGGTCGCCTTGACACAGAAATATAAGACCTGGGGTCCCTTTTTGTCCAGCAGAATGTATCTTCTGGTCCTTGTGGTACTGTGGAAATTATGTAGGATGTGGTCATAATGAGGATACTGATGTACAGTGTGAAATTTCTTGTTTCTATGGAAAGTAAAATCCGATGATATGATGATTAAATTATGCTGGAATTCTTTAATAAGTTTTTCGCTTGGTCAAGTTGGAGGGCCTTGAGGCTAAAATTCGATGATAGATGGTGCTCTATTAATAATTCTTTTCTTTTGAAGATTTTTGGAGGGTGCAGCCAGCATCGACAAACACTTTCGTTCATCTTCATTTGAGAAAAATATTCCTGTAAGTGGCTTTTCTATTGTGTTTACTGTTGCCAACCACCCTTATAACAGGCTCTTATCATTTATGGGTAGGTACTCCTTGGTTTGCTGAGTGTGTGGAATGTTTCATTTCTCGGATATCCAGCTAGAGTAAGAAATTCTGTCCCATTGGATCGTATTTTCAATTACGAATTGACCCATGCCTTCATTTGGGTGCTATCTCTAATATAAATGTTTTTTTTTCTAGGCAATACTGCCCTATTCCCAAGCACTTGAGAAATTTGCACCGCATATTCAGCAGGTTCTTCACTAGCTTCCTTTTTCCCAGTTCCATTATTGCATTCTCGTCCAGTTATTTCTAAGTCATAACATGTGCTCATTATGGTGTAAAGCTTAGCATGGAGAGTAATGGAAAGGGTGTCTCCATTGATGGTGTTCAACTGCCCTTTGAGAGTGGTGAAATTGATTTTGGTGAACCTGGAACCAATGGGCAACACAGCTTCTATCAATTAATCCATCAGGTAATGATTGGTACATCTAGCATGTTATGATCTAGGACTTACTTGACTAGCATCTAAGGTATGCAAAGCTTGACAATGCCATGGTGCTTAGAGTTGATGATATTTTGCTAGCGTACAGCATTTCTTTTTCTCTTTGCTGATTTGTGATATGCTCCATTTATTATGCCATCGTCCTTTTGCATCAATATGTTTATACTTTTATGAATGGATTATGCAAATTGCGACCATGCTACCTTGTACATTTATCTTGTCTTGTTCTTGATTTCTTCTATAGCTCTATGCGATATCAGCACTGTGTTTTTCAGTCTGCGTTGTCATTCTTTCAACAAAATATTTTAAGTTATCTCAGTAACACTGACTTCTTAGTTCTTACCTTTCTAAGTATCTAATAATGCAAAAGGAAAAGAAGAATTAGTTAGGAAACTTATTTGTGAATATCCATCTTTGTATTTTATGCAAGAAAAAACATCTTTGTTGATAATACTTGTGCCTAAACTTCCAGGGAAGAGTTATTCCTTGTGATTTTATCGGTGTCGTAAAAAGCCAGCAACCTGTTTACTTGAAAGGTGTTGTACATGATCCTTTTTTTCTTTCAAACCTTAATATGTTGCATGTTGACCTTGTGATTCTTCAACTGCATGTTGAACACCTATGTTGTGCGTATTTTTTTAGGGGAAATTGTGAGCAATCATGACGAATTGATGTCCAATTTCTTTGCTCAGCCTGATGCGCTTGCTTATGGAAAGGTAAATGATGTATTTCGGATATACTCACTTTCCATGAGCTGTTTCTTTTTGTTGTTTCTGACAGCAGTTCACTTGGTATTTCCAGACTCCTGAACAACTGCATAGCGAGAAAGTACCTGAACATCTTATCCCTCATAAGGTAATAATAATTCACTCATTCCTTGTCTAGTTTTCCCAAGACATTATGCTTTCAGCTATAGATGTAGCTTCTGACAGTTCTTTCTTGGTCCTTTCTTGTTACAGACTTTTCAGGGCAACCGACCATCGCTTAGTTTATTGCTGCCCTCATTATCTGCTTATGAGATTGGACAGGTATGCAAATGCATTCGGACACTTGTTTAGAGTTGCAAGTTTAGTCCTGAACCATATCAATTCTTTTCACCAATAGGATTCTGATCTTGTTTAGAGTTGTGCCGTGGCTCTCTTACCTCTATGGAGGTAAAGATGGAGTGCCCTAAAATGGCTCATATATATAATGTATTTTCTCTTCTTCATGAGGAAAGCCTGACCATCAGCGTCGAAAAAAGGAAAGCCTGACCAGCATATTCCATTTTTCTCAAGAAAAAACATGACTACGCCGGTTTCTTGCTATGTTTAATACCAAATCAACTGTTTTTTATGTAAAAAAAGGGGGGAAATTGAGATGAATTGACGTGCAGGACAGTGGGCAAGCTACTTTGCTTGTTAGACCTATGATAGTAAAGCTTGTGTGCAGCTGCCCCCTCCACTGCAGCATGTGAGCAGAGAAATAAAATTGTGCTGCTTCATCATTTTCCTTTCTTGATTGTAATCATATGGCACAACATTTGTTAGAATATAGTTTTTTCTTTTTTACATGATGCAATCCTTTGAGTTATAATTTACATGATCTGGACCAGCTATTAAATCCATGCACATCCTTTTTCATTCATGTCTTCTTTGGAAGAGTATTTGGTTGACTCCAAATTACCAGGAATAATACTTGGTTTACTATAAATTGCATTATTGTTTTCTACAGACGTACTAAGCACTAGCAAATTCTACTTTTCAGCTTTTAGCCATCTACGAGCACCGGATTGCAGTCCAGGGTTTCCTATGGGGAATAAACTCATTTGACCAGTGGGGAGTGGAACTGGGCAAGGTTAGTGCTTGAATATTTATACATATATTTCCATTTTGTTTGAAGGTCTAGTTTTTGGCTTCAATTCTAGCATGTGTGACTCTCAACTTTCCCCAGGCATATGTTTGTCTTATTTTCTTCATCTGAAGACTGAACTGTGTTGTCTGTATTTTTTTTTCGTGTCAGTCTCTTGCCTCTCAAGTGAGAAAATCTCTACATGCATCCCGCGTTGAAGGAAAGCCTGTCCTGGGGTTTAACAGCAGTACTACAAGTTTGCTGACACGATATCTTGCTGTACGTTCTTTGATAGTTCATCATAATTTATTATCCATGTTATATAATTAAATTTAGTTTCCTAAGTGTTCTTGACAGCTCATACCCTAGAACTGAGGGATTTATGTTGGAATTTAATCTGTTTTGTAGGTTGAGCCATCCACTCCTTACAACACTACCACACTGCCGAAAGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013652