BGIOSGA013686

From RiceWiki
Revision as of 10:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013686| Description = Glycolate oxidase| Definition = Oryza sativa Indica Group BGIOSGA013686, complete gene.| tag = GOX| tid = BGIOSGA013...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013686

Description

Glycolate oxidase

Definition

Oryza sativa Indica Group BGIOSGA013686, complete gene.

LocusTag

GOX

Ensembl Transcript ID

BGIOSGA013686-TA

Ensembl Protein ID

BGIOSGA013686-PA

Length

2585

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36844530..36847114

Sequence Coding Region

36844530..36844669,36845160..36845284,36845526..36845572,36845705..36845782,36845879..36846003
,36846107..36846173,36846275..36846337,36846461..36846530,36846630..36846835
,36846926..36847114

Genome Context

<gbrowseImage1> name=IndicaChromosome03:36844530..36847114 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:36844530..36847114 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGAGATCACCAATGTCATGGAGTACCAGGCCATCGCGAAGCAGAAGCTTCCGAAGATGATCTACGACTACTACGCCTCTGGAGCTGAGGATGAGTGGACTCTCAAGGAGAACAGGGAGGCATTCTCCAGGATCTTGTTTCGTCCCCGCATCCTGATCGATGTCTCAAAGATCGACATGTCCGCAACTGTTCTTGGGTTCAAGATATCAATGCCCATAATGATTGCTCCCAGTGCCATGCAGAAGATGGCTCACCCTGACGGAGAGTATGCAACAGCCAGGGCAGCTTCAGCAGCAGGAACTATAATGACACTGTCATCTTGGGCTACTTCAAGTGTTGAGGAGGTCGCCTCAACTGGACCAGGAATCCGTTTCTTCCAGCTATACGTGTACAAGGACAGGAATGTGGTTGAGCAGCTTGTCAGAAGAGCCGAGAGAGCTGGGTTCAAGGCGATCGCACTGACCGTGGACACTCCGCGACTGGGACGCAGGGAAGCTGACATCAAGAACAGGTTCGTTCTGCCACCATACTTGACACTGAAGAATTTCGAAGGCCTGGACCTCGCAGAGATGGACAAGAGCAACGATTCCGGGCTGGCCTCCTACGTCGCCGGGCAGATCGATCGCACGCTCAGCTGGAAGGATGTGAAGTGGCTGCAGAGCATCACGTCGCTGCCGATCCTCGTCAAGGGCGTCATCACCGCGGAGGATGCGAGGCTGGCCGTGCACTCCGGCGCGGCGGGGATCATCGTGTCGAACCACGGCGCGCGGCAGCTGGACTACGTCCCGGCGACCATCAGCGCCCTGGAGGAGGTGGTCACGGCGGCGGCGGGGCGCATCCCGGTGTACCTCGACGGCGGCGTCCGCCGCGGCACCGACGTCTTCAAGGCGCTCGCCCTCGGCGCCGCCGGCGTCTTCATCGGGAGGCCGGTGGTGTTCGCGCTGGCGGCGGAGGGGGAGGCCGGGGTGAGGAACGTGCTGCGGATGATGCGGGAGGAGTTCGAGCTCACCATGGCGCTCAGCGGATGCACCTCGCTCGCCGACATCACCCGCGCCCACATCTACACCGACGCCGACCGCCTCGCCCGCCCCTTCCCCAGGTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MGEITNVMEYQAIAKQKLPKMIYDYYASGAEDEWTLKENREAFSRILFRPRILIDVSKIDMSATVLGFKISMPIMIAPSAMQKMAHPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVEQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPYLTLKNFEGLDLAEMDKSNDSGLASYVAGQIDRTLSWKDVKWLQSITSLPILVKGVITAEDARLAVHSGAAGIIVSNHGARQLDYVPATISALEEVVTAAAGRIPVYLDGGVRRGTDVFKALALGAAGVFIGRPVVFALAAEGEAGVRNVLRMMREEFELTMALSGCTSLADITRAHIYTDADRLARPFPRL</aaseq>

Gene Sequence

<dnaseqindica>1..140#631..755#997..1043#1176..1253#1350..1474#1578..1644#1746..1808#1932..2001#2101..2306#2397..2585#ATGGGGGAGATCACCAATGTCATGGAGTACCAGGCCATCGCGAAGCAGAAGCTTCCGAAGATGATCTACGACTACTACGCCTCTGGAGCTGAGGATGAGTGGACTCTCAAGGAGAACAGGGAGGCATTCTCCAGGATCTTGTAAGCCATAATTCTTAATTACTTGATTGCTTGACATGTTACAAATTAATTGCACCACTACTCCTCCCTATGCCATATTGTGCATCAAAATATTTCATCTGTGTAAATGCCTCCCTATGAGTCTACCATGTACAAGTTCAATCTGATAGCTCATAGTTAAGTAGGATGGATCGACAAAACATTACTAGTTGTCCAATCCTGACCACTCGGTCTTTTTACTAGGTAGACTAGTTTAGCATGAGCACATCGTATTCTTTTCAAAATAGAGTTAAGGGCATTTCATTAGTTCAGTAAAATTGCCAATCAGTGAAACTCTCAGCTAATCATAATCTTATTCCCAGACCCAGAATATCTATCATACAACATCTAACGTTATCACTTTCTCCTACGAAAGCTTTAGCAAATGACTTAAATTTTTCAATCACATTCCTTAGGTTGAACATTTGTTAATTTTTCAGCCCACAATCTGACTGTAACCTTTTCTGGCTAGGTTTCGTCCCCGCATCCTGATCGATGTCTCAAAGATCGACATGTCCGCAACTGTTCTTGGGTTCAAGATATCAATGCCCATAATGATTGCTCCCAGTGCCATGCAGAAGATGGCTCACCCTGACGGTACATATGCCATTTCAATTATGTTGCTTAATTGTTGTACAGCCTTACATTTAGACCAAACTCAAAACCAAAAGTAATTTCATCCATCAACATTAGCATATTATATTGTTTTAAAAAAAAAGCATATTACTACTACAAAAACTGAAAATAAACTGAAGTTGTTAGCATGTAACAAGCAAGCACATGATCTACATTGATCTTTGCATAGAATTGGGCTAACTAAAATACCATATGTATTCAGGAGAGTATGCAACAGCCAGGGCAGCTTCAGCAGCAGGAACTATAATGGTATGCTATCTACATGTTGTCATGTTCAATAGCAAACAACATTTCCTTGGATGCATAACGAAACCAAACCAAAACAGAAATTCAAACTTGCATGAACGCCAATGTTAATTTGGTATCGCCTTCATGTTTCAGACACTGTCATCTTGGGCTACTTCAAGTGTTGAGGAGGTCGCCTCAACTGGACCAGGAATCCGTTTCTTCCAGCTATACGTAAACCATATCATATCACTCTGCTCATGTAGCATACTTTGGCTACATTTTATTTTCGTATCTCATTTTCTTGTATGATCTTGCATACATCTACAGGTGTACAAGGACAGGAATGTGGTTGAGCAGCTTGTCAGAAGAGCCGAGAGAGCTGGGTTCAAGGCGATCGCACTGACCGTGGACACTCCGCGACTGGGACGCAGGGAAGCTGACATCAAGAACAGGTGAGTTCTTAACTAGCCACCTGAATTTGGCACGATCTAGAAATGAATTTCAGCGAGTTGTCGTAAATGTTAAGTGATGTGATCAATGGCTGCGTTGTTGCAGGTTCGTTCTGCCACCATACTTGACACTGAAGAATTTCGAAGGCCTGGACCTCGCAGAGATGGACAAGGTCGGTTAATTCAGCCAAAAAAAAAAAAACAGTTATTTTCTCTGAAGAAAAAAATGGTCTGTTCTATGCAGCAATTTGAACCATTTCGTTGGCATTTGCAGAGCAACGATTCCGGGCTGGCCTCCTACGTCGCCGGGCAGATCGATCGCACGCTCAGCTGGAAGGTAATGATCAATGCTCATCGATGCTACAACAAACTTACCAACAAATTAACTTATCGAAATTACTGTTCTTGATGCTAAGATCGGGAGAAATTCTGACGGTGTGTGTTGTTGATGATGCTGCAGGATGTGAAGTGGCTGCAGAGCATCACGTCGCTGCCGATCCTCGTCAAGGGCGTCATCACCGCGGAGGATGGTAGGATAGCTTCCTGTTTCTTGCATTTCTTCTGATTTGACTGATTTGAAATCCACAAAATCACAAAGGAAACTGATGCGTTTATGCGCGCGTGCGCAGCGAGGCTGGCCGTGCACTCCGGCGCGGCGGGGATCATCGTGTCGAACCACGGCGCGCGGCAGCTGGACTACGTCCCGGCGACCATCAGCGCCCTGGAGGAGGTGGTCACGGCGGCGGCGGGGCGCATCCCGGTGTACCTCGACGGCGGCGTCCGCCGCGGCACCGACGTCTTCAAGGCGCTCGCCCTCGGCGCCGCCGGCGTCTTCGTAAGTCCTTCGATCGATAGCCGATGATCTATGGCGTGATACATGTCATCGTCGTCGTCGTCGTCTTGATGGATTGAATTGCGTTTGCAGATCGGGAGGCCGGTGGTGTTCGCGCTGGCGGCGGAGGGGGAGGCCGGGGTGAGGAACGTGCTGCGGATGATGCGGGAGGAGTTCGAGCTCACCATGGCGCTCAGCGGATGCACCTCGCTCGCCGACATCACCCGCGCCCACATCTACACCGACGCCGACCGCCTCGCCCGCCCCTTCCCCAGGTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013686