BGIOSGA013688

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Revision as of 10:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013688| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013688, complete gene.| tag = OS03G07...")
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Gene Name

BGIOSGA013688

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013688, complete gene.

LocusTag

OS03G0786800

Ensembl Transcript ID

BGIOSGA013688-TA

Ensembl Protein ID

BGIOSGA013688-PA

Length

6547

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36890387..36896933

Sequence Coding Region

36890387..36890669,36891791..36891906,36891981..36892044,36892221..36892323,36892752..36892932
,36893028..36893150,36893349..36893636,36894084..36894209,36894589..36894690
,36894780..36894833,36895038..36895144,36895387..36895447,36895539..36895670
,36895765..36895902,36895979..36896059,36896155..36896235,36896653..36896733
,36896820..36896933

Genome Context

<gbrowseImage1> name=IndicaChromosome03:36890387..36896933 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:36890387..36896933 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGAAAGCCAAGTTCCCCGGCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCCCCGGGGTCACCGAGAAGAACGGGCTCCACGTCGATCCCACGGCCGCCGCCGCCCGGACCGGTGGGCGCACCAACGGCGAGGAGGATGCGGAGATGGTGCTCGCCGACCAGGAGGAGCTCGCCGCTCCGAGCGCATCGGCCCCGGCGGGGGTCGCCGCCAACCTCTTCCGGAAGAAGGCCACACTCCCCCAGCCATCCGCCGCCCGCAAGCCCCTCCGAATCAAAATAGGTCAGCCAAAATTGCCAACAAACTTTGAGGAGGATACATGGGCTATTTTGAAAGATGCTATTACAGCTATATTTCTAAAACAGAAACTTTCGTGCGATGTTGAAAAACTTTACCAGGCTGCAGGTGACCTTTGTCTACACAAGCTAGGCGCAAATCTATACGAACGCATAAAGAAAGAATTGTGGGACATGGGGTTGAAGCTATTCTGCAAGCATCTTTCACTGTCTCCGGAGATTGAACACAAAACTGTTACTGGTCTTCTAAGATTAATTGAGAGTGAGAGGCTTGGTGAAGCAATAGACAGGACATTACTTAGTCATCTTCTGAAGATGTTTACTGCTCTTGGAATGTATTCTGAGAGTTTTGAAAAGCCCTTTCTGGAGTGTACATCTGAATTTTATGCTACTGAAGGTGTTAAATATTTGCAGCAGTCTGATATTCCAGACTATCTCAAGCATGTGGAGACAAGGTTGCAAGAAGAACATGAAAGGTGTATTCTATATTTGGAAGCTAACACTAGGAAGCCGCTTATAACAGCTACAGAAAAGCAATTATTGCAGCGGCACACGTCTGCAATTCTTGAGAAGGGATTCACAATGCTTATGGAAGCAAATCGTGTAAAAGACCTCTCGAGGATGTACACACTCTTCCAGAGGGTTGATGCCATTGAGTTGCTAAAGCAAGCACTTAGTTCATATATTCGGGGCACAGGCCAGGGCATTATCATGGATGAAGAAAAGGACAAAGAACTGGTGCCCTTTCTTCTGGAATTTAAGGCATCGCTTGATAGAATATTGGAGGAAAGTTTTGCCAAAAATGAGGCTTTCTCCAATACAATAAAAGAGTCATTCGAACATCTTATCAATTTACGCCAGAATCGACCTGCTGAATTGATTGCGAAGTTTCTTGATGAGAAACTTCGAGCTGGAAATAAAGGTACCTCCGAAGAAGAGCTGGAGGGAATATTGGATAAAGTTTTGGTTCTGTTCCGATTTATACAAGGAAAAGATGTATTTGAGGCATTCTACAAGAAGGATCTGGCTAAGAGGTTGCTGCTGGGGAAGAGTGCATCGATAGATGCTGAAAAATCAATGATAACAAAGCTCAAAACTGAGTGTGGAAGTCAATTTACCAACAAGCTGGAGGGAATGTTCAAGGACATTGAATTATCCAAAGAAATAAATGAGTCTTTCAAGCAATCATCTCAAGCAAGGACAAAGCTTCCATCTGGCATTGAAATGAGTGTTCACGTGCTTACAACAGGCTATTGGCCAACATATCCACCAATGGATGTGAAACTCCCCCATGAACTTAATGTCTATCAGGATATATTTAAAGAATTCTATTTGAGCAAGTATAGTGGAAGGCGTTTGATGTGGCAAAACTCATTGGGTCACTGTGTATTAAAAGCAGAGTTCCCAAAAGGTAAAAAGGAACTTGCGGTGTCACTATTTCAGAGTGTGGTTTTGATGTTGTTCAATGATGCACAAAAACTAAGCTTCCTCGATATCAAGGAATCGACTGGTATTGAGGATAAAGAATTGCGAAGAACGCTGCAATCACTTGCATGCGGTAAAGTTCGGGTTCTCCAAAAGATGCCAAAAGGGCGAGACGTAGAAGATAAGGACGAATTTGTATTTAATGAAGAATTTAGTGCCCCTCTCTATCGCATAAAGGTGAATGCTATTCAGATGAAGGAGACGGTTGAAGAAAACACAAGCACAACTGAGAGAGTATTCCAGGACAGACAGTATCAGGTGGATGCTGCCATAGTTCGAATAATGAAGACACGTAAAACCCTCAGCCACACGCTTCTAATAACTGAGCTTTTTCAGCAGCTCAAGTTCCCAATCAAGCCATCGGATATCAAGAAAAGAATAGAGAGCCTAATCGACAGGGAGTACCTGGAGAGAGACAGGAGTAACCCCCAGATCTACAATTACCTGGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MKKAKFPGSSSSSSSAAAPGVTEKNGLHVDPTAAAARTGGRTNGEEDAEMVLADQEELAAPSASAPAGVAANLFRKKATLPQPSAARKPLRIKIGQPKLPTNFEEDTWAILKDAITAIFLKQKLSCDVEKLYQAAGDLCLHKLGANLYERIKKELWDMGLKLFCKHLSLSPEIEHKTVTGLLRLIESERLGEAIDRTLLSHLLKMFTALGMYSESFEKPFLECTSEFYATEGVKYLQQSDIPDYLKHVETRLQEEHERCILYLEANTRKPLITATEKQLLQRHTSAILEKGFTMLMEANRVKDLSRMYTLFQRVDAIELLKQALSSYIRGTGQGIIMDEEKDKELVPFLLEFKASLDRILEESFAKNEAFSNTIKESFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGILDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQSVVLMLFNDAQKLSFLDIKESTGIEDKELRRTLQSLACGKVRVLQKMPKGRDVEDKDEFVFNEEFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPSDIKKRIESLIDREYLERDRSNPQIYNYLA</aaseq>

Gene Sequence

<dnaseqindica>1..283#1405..1520#1595..1658#1835..1937#2366..2546#2642..2764#2963..3250#3698..3823#4203..4304#4394..4447#4652..4758#5001..5061#5153..5284#5379..5516#5593..5673#5769..5849#6267..6347#6434..6547#ATGAAGAAAGCCAAGTTCCCCGGCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCCCCGGGGTCACCGAGAAGAACGGGCTCCACGTCGATCCCACGGCCGCCGCCGCCCGGACCGGTGGGCGCACCAACGGCGAGGAGGATGCGGAGATGGTGCTCGCCGACCAGGAGGAGCTCGCCGCTCCGAGCGCATCGGCCCCGGCGGGGGTCGCCGCCAACCTCTTCCGGAAGAAGGCCACACTCCCCCAGCCATCCGCCGCCCGCAAGCCCCTCCGAATCAAAATAGGTCCCTCTCTTTCACTGTAATTGCACGTTTTCCATGTGAGAATACATCATCGAGGGGTTTCGGGGGTAAATTGAGGGGAATTCTATTGTTCCTCTCAGTGTGTTCACTTGCCCGCTTGCGTCGTTAACTTAAATTCCAATAATAGGGAGGGATTGAGGTGGTGTTCGTTAGCCCTTTCGTCAAATGGATCGCTTCGTCACACACTTCTGTTTTCTATTTACTAATTGGCGTGTCTATTTGTAAAGAGGAATTTGGCTAGACACTTGGACTATTTTGGGGGAAATTGATAATTGCTAGGGTAACTAATGATTTCGTCAGCAACAATCCGTCTAGTTTCTCTTGAGATATATATGTATGTTCAATTCCTTGTAATTGCTTGTTTATCTTGGCTTGCTTTGTTGGGCGTGAATATGCATCAAGGATTTCTGCCTTTTTTAATGCAGTTGACAAGTGAGCTTGGGCATAGTTGTATGGTTCTTCTGACTTCCTGCTCCCCATTTGGTCGTATTGCACCATATGAGCTGGCTTCTAGCTAGATTGCTTAAAAGTTGACACTCTTTTGTCTCTTTATTGGGTGTAACTGTCGGTATTTATTGGAAGCTTTGCTTCGCATCTCCAGTATGTGACCTTCTCTAGTCTTCAGGAGAAAGCTGAAAATCCGTTTCTGTGCAATGGATGTTGCAGTGGCTCTAACCTTTAATATCTATTCATTTCTGAGTCATATATAATAATAATCACTGCACCAGTCACTATTCACTAATCAGTACCCACCATAACTAACTAGTAACCTGTATAAGAAAATTCAGAAGGCCATATGTTCTTTCTTAGATAATAGACCCCTGGGATCTTCTGGATGTATTTTTTGCAACCCTTTGGCGTGATTGGCAAATGAGATTGGGAAATAATATCCACCCATAAAAAATGCAACACTGCATCCTAGCCATCCATTCTAACCACTCCATTTCATTGTAGCCCTTCACTCATTTCCCTTTCCCGATCCCACCTCTCATAACCCATTTGCCGAACAAGAACTAAAGATTTACTCCCACCCCGGAATTCGTCTCTTGTTGCATCCCTTTTCTGTTTTGTTCATTATATCCCATCTGTTTTTCATGTATCAGGTCAGCCAAAATTGCCAACAAACTTTGAGGAGGATACATGGGCTATTTTGAAAGATGCTATTACAGCTATATTTCTAAAACAGAAACTTTCGTGCGATGTTGAAAAACTTTACCAGGTAATTTTTATATTGCTTCTATTCTATTTGATGATCCCACTTTAGTTATTTAGAACTTGTTTTCTTCACTATAGGCTGCAGGTGACCTTTGTCTACACAAGCTAGGCGCAAATCTATACGAACGCATAAAGAAAGAATGTGAAGTACACATATCGGCAAAAATATCAGCATTAGTGGGTCAAGTCCAGATTTAGTAGTATTTTTGTCTCTGGTGCAAAGAACATGGCAGATTTTTGCGATCAGATGTTGATTATTCGTGTATGCTTTACTTCTTGATGTAAAATATGTAAGAATGTTGCAAATCATTTGTTCAGTGTGGGACATGGGGTTGAAGCTATTCTGCAAGCATCTTTCACTGTCTCCGGAGATTGAACACAAAACTGTTACTGGTCTTCTAAGATTAATTGAGAGTGAGAGGTATGCCTACTCTGATGTACTGAGCCATGTTGTGTGCATTACCTGTCTTATTGTGTGTGTGTGTGTGTTTTTTTTTTTTTGGGGGGGGGGGGGGTGGGGGGTGGGCGTAAACATGGAATGATGAAAATTTGTAATGCATGTTCTGATTCACTTGGGAATTGTTCAGAGATCTGGGTTGAATGGTCAACTGTAAAAAGTACCCTTATCAGACTTAGTGCAATGTATTTTATACTCCATTACATATCAAAGAGTAATCAGTTTACTTGAGAAAAGTTTTGTCATTGCATTTACCTTGTGTGATGTAGCTGGCGATCATAGTGTATGTATTGGGTCCATTTTAAATTATTAAAATTGTGGACTTGAAGGGTCAATTTATTTTATATTCTTCTATGTAACTGATTATTCATTAACCATCTCTTCCTTATCAGGCTTGGTGAAGCAATAGACAGGACATTACTTAGTCATCTTCTGAAGATGTTTACTGCTCTTGGAATGTATTCTGAGAGTTTTGAAAAGCCCTTTCTGGAGTGTACATCTGAATTTTATGCTACTGAAGGTGTTAAATATTTGCAGCAGTCTGATATTCCAGACTATCTCAAGCATGTGGAGGTATTGATAAACCTCTTGTATTTCCCCTTGCATTTTGTTCACACAAAATTCAGGTATACTTATGCAATTGGTGGTATTTCACATGAATTATGCAGACAAGGTTGCAAGAAGAACATGAAAGGTGTATTCTATATTTGGAAGCTAACACTAGGAAGCCGCTTATAACAGCTACAGAAAAGCAATTATTGCAGCGGCACACGTCTGCAATTCTTGAGAAGGTGATTATCTGCTCTTACAACTGTAGGATTTGTTATCTGGCCAGAATAAGAATGTGATGGTGCATTTTCTAGTTGACCCATTAGATCAATATATAGAAAAGAGGTGTTTACTTTATCAATATATTATATTTGTTGGCCACTAATTTAGTTTAGCCACTGTCTCATTCATGACCTGGCATATGATGTTTTACCGTTCAGGGATTCACAATGCTTATGGAAGCAAATCGTGTAAAAGACCTCTCGAGGATGTACACACTCTTCCAGAGGGTTGATGCCATTGAGTTGCTAAAGCAAGCACTTAGTTCATATATTCGGGGCACAGGCCAGGGCATTATCATGGATGAAGAAAAGGACAAAGAACTGGTGCCCTTTCTTCTGGAATTTAAGGCATCGCTTGATAGAATATTGGAGGAAAGTTTTGCCAAAAATGAGGCTTTCTCCAATACAATAAAAGAGTCATTCGAACATCTTATCAATTTACGCCAGGTAGGCCATATTTATGATTCTGCTTGACAATATTTTTTTTCCTTTCTTGTGTACTGAGTTCATATCTTATATCACAATATTTTGTAATTTGCTTTCCTACTACAGTCAGTCTTCCCTTTTATAGCCTGCTAAACTGTTTGATTCTTTGATTTTTGACTTGCTGGGACATGTTGATATTGGCCATTTGTTTAAGAACTGTGCTGTCCTTGTACATATTGCTTTATGTTGGTTTCCTATCGCAGTCCAGTTTGGCTGTGATACTTGATAAACAGAAAGCTCAATTCTTAGATTTGAGATATGCTGGTACCAATACATTTTGTTTCTGATGTTCATTGTTATCTAGTTGCTTTTTTGTACTTAAGTAGATGTGTAATTTATCCTGCATTTTCTTTCTTTGTACTATGTTTTATTTTATGAAAGATCAGCTCAAGCCCTTTTTTCCAACAGAATCGACCTGCTGAATTGATTGCGAAGTTTCTTGATGAGAAACTTCGAGCTGGAAATAAAGGTACCTCCGAAGAAGAGCTGGAGGGAATATTGGATAAAGTTTTGGTTCTGTTCCGATTTATACAAGTAAGTCACTAGGTTATTTTATATCACTAAGTTTCTTCTTTGTCAGCATCTTGTTCTTTCAATTTCAGTTATACATGTGGGACACCTCCTTTTTCAACTACTCAACTGTATAAAATAGTAAAACTCCCTATATGGTGATCATATTAAAGAAAAACAATTTCCATGAGCATGTGGGCGGATGGTTTAAGCATTGCATTGAAGATGATGCTATAGGTCTGGTCCTTCACAAACATGGTTATAATATGTCATTCTTATAGAGTCCTATAGACCTATAGTCCTCTGTATGAAGCTTCTGGGAGAAGCTAATGCACATAAAATTTACTAGTACGTAGTAACAAATAAAAGATTGAAGAAGGTTAATATTCTTAATTATGTTCAGGGAAAAGATGTATTTGAGGCATTCTACAAGAAGGATCTGGCTAAGAGGTTGCTGCTGGGGAAGAGTGCATCGATAGATGCTGAAAAATCAATGATAACAAAGGTAATTATTTATTTGCTGATGGTTTAAAATAATATTTTACATGCCATCCAACTTGCTGACATACTTGAGTATTTTTTTTCTGTTTGCAGCTCAAAACTGAGTGTGGAAGTCAATTTACCAACAAGCTGGAGGGAATGTTCAAGGTAGCAATTTGCTATAGAAGAAATGACTTTTGCTAGTATACTAGCCTTTTTGCGAACTCTCGCCCTATGTATATTTAGTTCAAATGTTGCTAACTTATATATGCTCTATGCCTCTATCCATTGGTGGCGTACACGATATCATCAATTTCTTTTATTTGGATTTAATACTCTTGTAAAATAAAATGACTTTGGTGCTGTTCTCAGGACATTGAATTATCCAAAGAAATAAATGAGTCTTTCAAGCAATCATCTCAAGCAAGGACAAAGCTTCCATCTGGCATTGAAATGAGTGTTCACGTGCTTACAACAGGGTAGGTAACATGTGCCTTGCCATTTTTACATGTGTGCTGGTTTACTGAGTAGCATGTTCTGTTTACACAACACTTGTCTAAACCTAATACTGATAGATAGGCTTCTTAGTCCATGACATGTAGCTGGAATATGGGCAATGGATTATATAACTTTATAATAGGCGTTTGCTGAGCATGTTAACATGCAACTTGATATTTTCTATCATAAATGTGCATTTCTGATTAAATATGTTGCATTGCAGCTATTGGCCAACATATCCACCAATGGATGTGAAACTCCCCCATGAACTTAATGTCTATCAGGTCAGGCCATGTTCTCAAAACTATGTTTGTTGGCAGTAAATATTTATATTAACTGCCTGGAAATTAATTTAGTTTTCTATTTTTCTGATAGGATATATTTAAAGAATTCTATTTGAGCAAGTATAGTGGAAGGCGTTTGATGTGGCAAAACTCATTGGGTCACTGTGTATTAAAAGCAGAGTTCCCAAAAGGTAAAAAGGAACTTGCGGTGTCACTATTTCAGGTAGGGTTATTTTTCCCAATTTCTTTGGTGGTTTATTGTAGCTGTAACTGTCTGATCAATAATTAGAAAATCACTGATTTATTCTGTTTTTCAGAGTGTGGTTTTGATGTTGTTCAATGATGCACAAAAACTAAGCTTCCTCGATATCAAGGAATCGACTGGTATTGAGGATAAAGAATTGCGAAGAACGCTGCAATCACTTGCATGCGGTAAAGTTCGGGTTCTCCAAAAGGTGTGGCTCTTTATTTTATCCAAATGTCTAACTAATTTTCAGTAGCAGCTTGTTCAGTTGTCACTTTTATTTTCAGATGCCAAAAGGGCGAGACGTAGAAGATAAGGACGAATTTGTATTTAATGAAGAATTTAGTGCCCCTCTCTATCGCATAAAGGTAATATTCGTCATCTAATTTGTGTGGGGTGGGGTGGGTACGTCGAGTTTGGGTGTGTCATCAGGCTTAACTAAGGTAATGCTGTGTGTTTCCAGGTGAATGCTATTCAGATGAAGGAGACGGTTGAAGAAAACACAAGCACAACTGAGAGAGTATTCCAGGACAGACAGTATCAGGTGCATTAACCATCTAAACTTGCAAACAAGAACATCCTTTGAGGACTTCTAGTTACACTTGTCCCCGTTTAGTTATCCTCGATTTTTGGTATAAGATGTTAGCTAAACTAGTATGCTGTGCTTATGCTTCCTCTGGTTCTTATGTGACGCCGTAGAAGTTTTACCCTCTATTTGCACTCAGCACATGGTAGCTAGTTTCTAATCTTACATGCTTTTTATTCATTGAAGCAACACATTATTGTTAGTTCATATTGTTATCTTACATGCTATTTTTCTTGCTTAATTAATGTCTGCATCTTTTAGGTTTAACGTCACCATTCCAAACAAATTTATTCTGGAATGTTTTTGGTGCAAATCTAATGATGAATTCAATCACGGGAGAGTAATGCCACAAGTTCCTTTTCTTGTTCCGTGCAGGTGGATGCTGCCATAGTTCGAATAATGAAGACACGTAAAACCCTCAGCCACACGCTTCTAATAACTGAGCTTTTTCAGCAGGTTAGACATGTTTTCAACGCATGCATTCCATTTTGCGCACTCCACAATTTTGATATCTTAAAATATATCGTTTTCTTTTCTTTCAGCTCAAGTTCCCAATCAAGCCATCGGATATCAAGAAAAGAATAGAGAGCCTAATCGACAGGGAGTACCTGGAGAGAGACAGGAGTAACCCCCAGATCTACAATTACCTGGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013688