Os12g0502300

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0502300| Description = Similar to Cyclin A-like protein (Fragment)| Version = NM_001073360.1 GI:115488681 GeneID:4352280| Length = 4968 bp|...")
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Gene Name

Os12g0502300

Description

Similar to Cyclin A-like protein (Fragment)

Version

NM_001073360.1 GI:115488681 GeneID:4352280

Length

4968 bp

Definition

Oryza sativa Japonica Group Os12g0502300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19283156..19288123

Sequence Coding Region

19283459..19283515,19283612..19283746,19283835..19283984,19284081..19284114,19284214..19284290
,19284390..19284465,19284659..19284792,19285353..19285445,19285639..19285745
,19286372..19286675,19286780..19287085

Expression

GEO Profiles:Os12g0502300

Genome Context

<gbrowseImage1> name=NC_008405:19283156..19288123 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19283156..19288123 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggaaggaaggaaaatccggtgcttactgcttgccaagcacccagtggtcgaatcacacgagctcaagctgctgcaaatcgtggacggtttgggtttgctccctccgtatcactacccgcaagaactgaacgaaagcagacagcaaaaggaaagacaaaaaggggagctttggatgaaatcactagtgcaagtactgcaacttcagctcctcagcctaaacggcgcacagtgctcaaggatgtaaccaacatcggctgtgccaactcatccaaaaattgcaccaccacgagcaagctgcagcaaaagtcaaagcccacccaaagggtgaaacaaatcccgagcaaaaagcagtgtgcaaagaaggttcctaagctaccccctccggctgttgctggaacttcatttgtgattgattctaaaagttctgaagaaactcaaaaggtggagcttttggcaaaagcagaggaacccacaaatttgtttgaaaacgaggggttactgtcattgcagaatattgagcgaaacagggacagtaattgccatgaggcattctttgaggcaagaaacgccatggataaacatgaactcgctgactccaagcctggtgactctagtggtttaggttttatagatattgacaatgataatggaaatcctcaaatgtgtgcttcctatgcttcagagatatacacaaatctgatggcctctgagcttatcagaagacccaggtcaaattacatggaggctttgcaacgtgacatcacaaagggcatgcgaggcattctcattgattggcttgttgaggtttctgaagaatataagcttgtgccagacacactctacctaaccattaatcttattgaccgatttctttctcaacattatattgaaagacagaaactccaacttcttggaataacaagcatgctgattgcctcgaaatatgaagagatatgtgctcctcgtgttgaagaattttgtttcataactgacaatacatacacaaaagctgaggtgctgaaaatggagggcctggtgcttaatgatatggggtttcatctatctgttccaacaacaaaaacatttctcaggagattccttagagccgcacaggcttctcgtaatgttccttcaattaccttgggatatctggccaattatcttgcagagctgaccctgatcgattacagtttcctcaaatttcttccttcagtggtggcagcatctgcagtctttcttgcaagatggacacttgaccaatctgacattccatggaatcatactcttgagcactacacttcttacaaaagctctgatattcaaatatgtgtctgtgctctacgggaactgcagcataacaccagtaattgccctctcaatgctatacgtgaaaagtataggcaacaaaagtttgagtgtgtagccaacctgacatcaccggagctggggcagtcactcttcagctga</cdnaseq>

Protein Sequence

<aaseq>MAGRKENPVLTACQAPSGRITRAQAAANRGRFGFAPSVSLPART ERKQTAKGKTKRGALDEITSASTATSAPQPKRRTVLKDVTNIGCANSSKNCTTTSKLQ QKSKPTQRVKQIPSKKQCAKKVPKLPPPAVAGTSFVIDSKSSEETQKVELLAKAEEPT NLFENEGLLSLQNIERNRDSNCHEAFFEARNAMDKHELADSKPGDSSGLGFIDIDNDN GNPQMCASYASEIYTNLMASELIRRPRSNYMEALQRDITKGMRGILIDWLVEVSEEYK LVPDTLYLTINLIDRFLSQHYIERQKLQLLGITSMLIASKYEEICAPRVEEFCFITDN TYTKAEVLKMEGLVLNDMGFHLSVPTTKTFLRRFLRAAQASRNVPSITLGYLANYLAE LTLIDYSFLKFLPSVVAASAVFLARWTLDQSDIPWNHTLEHYTSYKSSDIQICVCALR ELQHNTSNCPLNAIREKYRQQKFECVANLTSPELGQSLFS</aaseq>

Gene Sequence

<dnaseqindica>4609..4665#4378..4512#4140..4289#4010..4043#3834..3910#3659..3734#3332..3465#2679..2771#2379..2485#1449..1752#1039..1344#tttacttttctagggcactactcgccgccgcaggcggccgcgggggacgggggagcgcctctccgtgtcccgggtgcccgcgccgcgcagagggggtgggtgactccgattgtttccgggaattttgggtgggttggcatttggggccgggtggggtggggggttcttgatttggtcttgcatttgggggttcttggtacgcattggtgattttcgcggcgctcgtggggggttcttggcttcttgccccgtcgtctgtgtggtagatctgcttgatctgtgcgcgtctgaggatgggggatgtgcgtagattggtccatgttggtaacgtttgcgaggatttcagctttagggctaaggttgggtggcatcctttttgaaaaaaaaagtgagtttttagttgagtatctgatggtagcttgacttggagggtttcttggcacaatctggtgcataaggttaattttgcatctgttcaacgccatgaaagaaaacaaaagtgttaggaaatctaacctgaatatgaagatggcattttgcaaggcagttttagaagggacttttgtttaaagaacgccataaaatctatagaaagcgctgccttttttgcacataacgaaatggacaaataaatctggtttcagatttgaattatagatcataactgtaaacatttgtgccaactgactgctaattccgatctgtatgccctgggattatctattatttctctcaattatgctacgaagggactgaataattttggtttaacttgtgcacttgtgagtaaatatgatcttgttagatttgcaaataagatctgatactgttttatgtctgcattgcatctacttgttcgatttctttttcacactgatacttaatgcttaatacaccgtctcattcagctccataaagttatttgccttggttgatatcttcattgctcactgtgcaatttctttctttcttttttttgcgtcaaaactgcacaatttcttatgtcattttttttccttttaacacattcaggctcacatggctggaaggaaggaaaatccggtgcttactgcttgccaagcacccagtggtcgaatcacacgagctcaagctgctgcaaatcgtggacggtttgggtttgctccctccgtatcactacccgcaagaactgaacgaaagcagacagcaaaaggaaagacaaaaaggggagctttggatgaaatcactagtgcaagtactgcaacttcagctcctcagcctaaacggcgcacagtgctcaaggatgtaaccaacatcggctgtgccaactcatccaaaaattgcaccaccacgagcaagctgcaggtatcaagagctgctgcattatcgcattatgctattatgatttttagacctttattttccatgaacattgttgatggagtgataaggttattcctttgttccagcaaaagtcaaagcccacccaaagggtgaaacaaatcccgagcaaaaagcagtgtgcaaagaaggttcctaagctaccccctccggctgttgctggaacttcatttgtgattgattctaaaagttctgaagaaactcaaaaggtggagcttttggcaaaagcagaggaacccacaaatttgtttgaaaacgaggggttactgtcattgcagaatattgagcgaaacagggacagtaattgccatgaggcattctttgaggcaagaaacgccatggataaacatgaactcgctgactccaagcctggttagttattttgcatacgttgcgtgcttatttttagcaatgagtatctggacttactgatttttcttttcaagtcagctaattctataaaaaagattcatatatcccttagcgtgtcatgttatctaccggttgtcaatcacttctatcaggaacatactcttgattgtctttctgttgtcacagaacttagaatcaagataaccatgactataatgtttctgtacaaaaccatgactataaatgtttctgtacactgctgacttctgagatattcgtagataatctgtacttactactgcagatgttggtagtggtggtggtggttctgccagtgtcatgtgggcctatgatgtcagtgtccactatataaatcaaatacaatgtggataatttataccaattgtttatcgctagagcaactgtgtagctcgacttacatgtatacaattgtaccaaatatgatatgatgattagagagtggtaataattttattttgctttttgggctttactgtaatccccttgcaatgcacgggtattttgctagtcataatcaagaaaaacatgaatataaatttttctgtacactgctgattgctaaagagtcatttattttgttccaggtgactctagtggtttaggttttatagatattgacaatgataatggaaatcctcaaatgtgtgcttcctatgcttcagagatatacacaaatctgatggcctctgaggtatgtttttgttctttgatgaaaaacaaaatcttgtttactgtcttaacatgctcatggtttcttcatatttcaaacattctagtatgacaaaagtaatttcagtttttcatggttgtgtttcatccctgtgttattggtgctttcttcttgtttgaattcaaactccatcttctgcttatgccattcccagcttatcagaagacccaggtcaaattacatggaggctttgcaacgtgacatcacaaagggcatgcgaggcattctcattgattggcttgttgaggttgatttctcttgatgtaatttgcacataaactgccctgctatcttttcaaacgaatttaagccgtttattgttaggccgttagcatctcgctgcatgtcacatagaaactcatgtatgtgcaactcaaacatgaaatacatagttacatgtgaatgttacatactggatgctgcatctggttaaaagcctacaagaacattctttctattgaatcattattgtttatactttttccatttgtcctttgcatttccctttgaaagtaccatagtttcaatgatgaaaagtttatatgagataattgaataagttgtggattataaaatcactcttctcatcatttagcggagagcctgagatactgaagaggtgagaatatgagtagttggcttctgcatcagaagcaagctttatacatttcttgcaaaattcgaagaatctgccttttcttttttgttataataaaccatgatcatcctttgtacattttaatttaataatatgaactgttcatgacttctgagcttatgaagttctgtatattgtcttcatttcaggtttctgaagaatataagcttgtgccagacacactctacctaaccattaatcttattgaccgatttctttctcaacattatattgaaagacagaaactccaacttcttggaataacaagcatgctgattgcctcgtaagttttggatacatatatgtgattttcccaaaatgtaccatagaaaggtttacctagctgctgatgcagcttagtctgtagctaatgtaaagtacaagctaacaactctgcaagttgtcttcatgtcattggaattgcatgttgtcttcatgtcattggaagtattgctaagtctaccttctttttataggaaatatgaagagatatgtgctcctcgtgttgaagaattttgtttcataactgacaatacatacacaaaagctgaggtatttgtttaatgtgatgtctgaagaaattgctaatttatgtatatagaagagccattgaactgccattgctgatatgatatccccctgattcaataggtgctgaaaatggagggcctggtgcttaatgatatggggtttcatctatctgttccaacaacaaaaacatttctcaggtagttttggttaccacatacatatggtgtttcttgtccaatctaagttgtggttctatcactaacatgaccgtcctgcttttctttatattttatcaggagattccttagagccgcacaggcttctcgtaatgtaagattggcacccgaccttttatcagctacaattttcattcattccttttatgtgtatatccctgaacgccaaattttcaaactgtatttccaggttccttcaattaccttgggatatctggccaattatcttgcagagctgaccctgatcgattacagtttcctcaaatttcttccttcagtggtggcagcatctgcagtctttcttgcaagatggacacttgaccaatctgacattccatgggttcgtataacaaggatatgcactatatcgacctctgtatcaccccaaaacattttttctaatcttcaaccttggtatctttttacagaatcatactcttgagcactacacttcttacaaaagctctgatattcaaatatgtgtctgtgctctacgggaactgcagcataacaccagtaattgccctctcaatgctatacgtgaaaagtataggcaacaaaaggtacatgatcaccacttcaccagcttcttgaggtactagactaaaaagggtcatttgttcatcttttgtgaccatttaattgtacttcgtgtgcagtttgagtgtgtagccaacctgacatcaccggagctggggcagtcactcttcagctgacaaaggcaatggtatcagtttcctgttaatcaacaaccgttagcagcagtcattaccatgactgctttctgatttgttgtgttgtcctgaagtgttgtttcccgaccattttagagtcgtgcagtaaaaaaaaaagaaaaagaaaaggagagatagcttgcatttgtttgaccttaagtatgcctttagttgataattgtaagaaaacactcactgtgtgtaggctgccgcctttgggttgataattgtaagatgatcctgcttgtataacaaatggttgcttggtttgaccgagattatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0502300, RefSeq:Os12g0502300