BGIOSGA013714

From RiceWiki
Revision as of 10:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013714| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013714, complete gene.| tag = OsI_138...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013714

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013714, complete gene.

LocusTag

OsI_13866

Ensembl Transcript ID

BGIOSGA013714-TA

Ensembl Protein ID

BGIOSGA013714-PA

Length

3442

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37282610..37286051

Sequence Coding Region

37282610..37282639,37282751..37282838,37283453..37283530,37283747..37283834,37283987..37284091
,37284186..37284686,37284818..37284953,37285092..37285285,37285375..37285483
,37285872..37286051

Genome Context

<gbrowseImage1> name=IndicaChromosome03:37282610..37286051 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:37282610..37286051 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGGAAGAGAGCAACAAGAAGAGCAAGCTCTCATGGTCCAAATCCCTTGTGAGGAAGTGGTTCAACATCAAGAGCAAGGCAAACGATTTCCATGCGGACTATGATGCTAGCCAAGGAAGAAATGGTCATGGAGGTGAATGGAGGACCAGCTGCTCAGAGAGGGAGGCAGGCACAGCCAAGAAAAGCAGAACTGACCGGATGCCAAAGAAGAATGCCGACTGCATTCGTCGAGGAAGGACTGAATCTGATGTGTCACGCCTGACTGAAGTTCAAGATTACAGAATATTTGCTTCAACATGGAATGTGGGTGGTAAATCCCCATCAAAGGGATTAGATTTAGATGAGTGGCTCCACTCTTCACCTCCTGCTGATATCTATATTCTAGGATTTCAAGAAATTGTTCCTTTGAATGCTGGAAATGTTCTTGGTACTGAAGATAATGTTCCAGCAAAAAAGTGGGTATCCCTCATTAGGAGGACACTGAACAGGAATCCTGGGGCTAGCAGCTATGGTGGCTATCACACACCATCTCCTGTCCCTGATCCAGTTGTTGAACTAGATGCTGATTTTGAGGGATCATCGAGAAGACATGATAACTTGTCATTTTTCCATCGGCGATCATTCCAGAACCTTAGTCAGAGTTTAAGAGTCGAAGGAAATTATATGTCATCACAGCCAAGGTTGGACCGTAGGTTCAGCGTTTGTGACCCAGTTAGCTTGGGCGGCAGACCAAGTGATTTTGATGGAAATTTCCCATGTGCGGGATCACCAGATGATGAATATATTGAGGAGGATGGAAGCAATGGAACTTATTTTTCACCGTTCCCATATGGCTACGGTACCTCAATAGCTATGGAGGAAAACGATGAGCAACCAAATACCTCTAGGTACTGTTTGGTTGCCAGCAAGCAGATGGTTGGTATATTTCTCACAGTTTGGGTGCGCAGCGAATTAAGAAATGATGTGAAAAATCTTAAAGTCTCTTGTGTTGGTAGAGGTCTAATGGGGTATCTTGGAAATAAGGGTTCGATATCAATAAGCATGTCTTTGCATCACACATCCTTTTGTTTTATCTGTTGTCATTTGACATCTGGAGAAAAGGAGGGGGATGAATTGCGCAGAAATTCTGATGTTATGGAAATCTTAAGAAAGACTAGATTTCCTCGGGTTCGTGGTGCTGGTGACATTAAGTCACCAGAAACCATTCTTGAGCATGATCGTATCATATGGCTTGGGGATTTGAATTACCGGATTTCCCTTTCATACTGCTCGGCAAAAGCACTCGTTGAAATGCATAACTGGAAGCAACTGTTGGAGAAAGATCAATTATCTTATGTTCGTGGAGAGTCGCGCTTCTCCGACCATAGACCAGTGTACAGCATTTTCATGGCGGAGGTTGAAATTATCCGCCAGAGGAGAAGAAATATGGGCTGTTTCAACTCTAGAGTTGAGGTGGAAGAGCTTCTGCCATATTCTTACAGCTTTGGAGACATCAAGTTCAACTAA</cdnaseq>

Protein Sequence

<aaseq>MREESNKKSKLSWSKSLVRKWFNIKSKANDFHADYDASQGRNGHGGEWRTSCSEREAGTAKKSRTDRMPKKNADCIRRGRTESDVSRLTEVQDYRIFASTWNVGGKSPSKGLDLDEWLHSSPPADIYILGFQEIVPLNAGNVLGTEDNVPAKKWVSLIRRTLNRNPGASSYGGYHTPSPVPDPVVELDADFEGSSRRHDNLSFFHRRSFQNLSQSLRVEGNYMSSQPRLDRRFSVCDPVSLGGRPSDFDGNFPCAGSPDDEYIEEDGSNGTYFSPFPYGYGTSIAMEENDEQPNTSRYCLVASKQMVGIFLTVWVRSELRNDVKNLKVSCVGRGLMGYLGNKGSISISMSLHHTSFCFICCHLTSGEKEGDELRRNSDVMEILRKTRFPRVRGAGDIKSPETILEHDRIIWLGDLNYRISLSYCSAKALVEMHNWKQLLEKDQLSYVRGESRFSDHRPVYSIFMAEVEIIRQRRRNMGCFNSRVEVEELLPYSYSFGDIKFN</aaseq>

Gene Sequence

<dnaseqindica>1..30#142..229#844..921#1138..1225#1378..1482#1577..2077#2209..2344#2483..2676#2766..2874#3263..3442#ATGAGGGAAGAGAGCAACAAGAAGAGCAAGGTATGTGAGCTTCCTTTGTGGTGGTGTTTCAGATCAATCTGGGCATCTTGTTGTTTCTCTGCTGTGTTTTTGATCGAGTAGGGCTTTTTTTGTTGGCTTCTTGATGTGTAGCTCTCATGGTCCAAATCCCTTGTGAGGAAGTGGTTCAACATCAAGAGCAAGGCAAACGATTTCCATGCGGACTATGATGCTAGCCAAGGTAATGCGAGCGTTTCATTTTGATTTATGAGATGAGAACTTGTGTTCTTCCTTGGATCATAACCAAACTGTTGATTCCAGTTCATAGTTGTAGCTAATTTGGATCATAACCAAATTCCCAAACCAACAACCTGTTCTTCTGTTTTTGTTGTTTAGTTGGTTGTGCATGCTAGTTCTTGTGGTGTGTGAAGGTTGGTTGAATGCAGATTTTATCATCTTGTGCTTGTAGTTCCTCGATTCCATCAGACATTTCCAGTCCAAGTTCCTAGTCTCGATTCAACAATGCAGTAGCACCAGACATGCCCCAATCAAACGCCTTTAATTTCTTAGACACGACCACATTTAAGTCTCGGCTCCTGGTTTCGGTTTAGTGGTACACAAGTCATTAGAATGTCCCAATCAAACACCTTTTCCTAAGTGATTCTGATATTTGTCCGGTGCTGCTTGGAGTTTTTGTATGTTTCTAACACTAAGTCATAAGTCATTTTTGCCGGTCTAAAAGCTTGTACTTTTGATTTCAAGATCGAGAGATGATGAAACGGTCTCAGACAATGACCATTTTATTTTCATTTTGCTGTCTTGCTCAGTTTGGGCTGAATTTGCTTGGTGATCCAGGAAGAAATGGTCATGGAGGTGAATGGAGGACCAGCTGCTCAGAGAGGGAGGCAGGCACAGCCAAGAAAAGCAGAACTGGTACAGTTAAAGCATTTGGACCACACTTCTTTCTCTCTCTTCAGACATCAAAGATCGCAGCTACCTCCTTTTCTTTTCCCCACGACTCTAATTTCCCTGTTGAGCGTTCCTGTTTTCGCCTAAATGATTTGAATGATTATCTAAAATCCGAATACTGTTCATTCTGTTCCTTACCGATTTATCTGAATGTCTGTTTTTTACTTATGGGCATGATAGACCGGATGCCAAAGAAGAATGCCGACTGCATTCGTCGAGGAAGGACTGAATCTGATGTGTCACGCCTGACTGAAGTTCAAGATTACAGGTACCCAAATACCCATATATTTCTTTGCCTTGTAAGCTTGTTGTCAGGGGAAAAAGGTTTAGGCATATAATGCACTGCAGTTCTTGGTTTTTGCACGTTGACTTTGGTAGGATAATTGATGTTGTTGCTTATTCGCTCCCTTTTGTGTGCAGAATATTTGCTTCAACATGGAATGTGGGTGGTAAATCCCCATCAAAGGGATTAGATTTAGATGAGTGGCTCCACTCTTCACCTCCTGCTGATATCTATATTCTAGGGTATGTACTGCCCGAGGCCTTGTCATTTTGAACTACATTATGTAGTACATACCAGTGGACTTGAGCTATTGTCTTCAATTCATGCTGTATGCAGATTTCAAGAAATTGTTCCTTTGAATGCTGGAAATGTTCTTGGTACTGAAGATAATGTTCCAGCAAAAAAGTGGGTATCCCTCATTAGGAGGACACTGAACAGGAATCCTGGGGCTAGCAGCTATGGTGGCTATCACACACCATCTCCTGTCCCTGATCCAGTTGTTGAACTAGATGCTGATTTTGAGGGATCATCGAGAAGACATGATAACTTGTCATTTTTCCATCGGCGATCATTCCAGAACCTTAGTCAGAGTTTAAGAGTCGAAGGAAATTATATGTCATCACAGCCAAGGTTGGACCGTAGGTTCAGCGTTTGTGACCCAGTTAGCTTGGGCGGCAGACCAAGTGATTTTGATGGAAATTTCCCATGTGCGGGATCACCAGATGATGAATATATTGAGGAGGATGGAAGCAATGGAACTTATTTTTCACCGTTCCCATATGGCTACGGTACCTCAATAGCTATGGAGGAAAACGATGAGCAACCAAATACCTCTAGGTATTGTTTTGGTGAAAATCCATTTTGTGAATCTATTCTAGTCTTATAAATTTTCAGCTAAAAAAAATGCTAAGTTGACTATGATCCTTCTATATTGAAGCTATAACTTCTGAAAATGTTGTGTCTACCAGGTACTGTTTGGTTGCCAGCAAGCAGATGGTTGGTATATTTCTCACAGTTTGGGTGCGCAGCGAATTAAGAAATGATGTGAAAAATCTTAAAGTCTCTTGTGTTGGTAGAGGTCTAATGGGGTATCTTGGAAATAAGGTAAACTTTATGAGTTCACAGTTCTTTGAAATGTTTTCTTTTAATCATCTTGCGTGTAGAAAGTGAAAATATTGCAGATAGATTGTTGTTCACTGTTACTGTAACATGTTACTTAAAGGTCCTTTCCTTTTGTTGCAGGGTTCGATATCAATAAGCATGTCTTTGCATCACACATCCTTTTGTTTTATCTGTTGTCATTTGACATCTGGAGAAAAGGAGGGGGATGAATTGCGCAGAAATTCTGATGTTATGGAAATCTTAAGAAAGACTAGATTTCCTCGGGTTCGTGGTGCTGGTGACATTAAGTCACCAGAAACCATTCTTGAGCATGAGTATGAATTTATGTTCCCTACTCTACATTGCAATGTGGAAGCAACACAACACTTGGCTTTAATTTTACATTCCTTTGATTCAATTGCAGTCGTATCATATGGCTTGGGGATTTGAATTACCGGATTTCCCTTTCATACTGCTCGGCAAAAGCACTCGTTGAAATGCATAACTGGAAGCAACTGTTGGAGAAAGATCAAGTAATTGACACTGTTTTGTTAATACTTAAATTACAACATGACATGCATCGCACATCCATTATTTTTTTCAGGACCATGTTTAAGTTTCTTGTTTTGTAACAGCTACGAATAGAACGAAGATGCGGACGCGTTTTCCAGGGTGGAAAGAAGGACGGATTTATTTTCCTCCAACATACAAATATTCATTCAACTCAGATCGCTATTCTGGGGAGTGTGTGCATTCAAAGGAAAAGCGAAGAACACCAGCTTGGTAACTTCTTTAGCACTTGTATCAACCAGAATTTTCTCCTGCTTTGATTTTTTTTTTCAAAGCAACGTACTGAAAAACCTGTTCTTTATTGACCATAGGTGCGATCGTATTCTATGGCACGGTAATGGACTCATTCAGTTATCTTATGTTCGTGGAGAGTCGCGCTTCTCCGACCATAGACCAGTGTACAGCATTTTCATGGCGGAGGTTGAAATTATCCGCCAGAGGAGAAGAAATATGGGCTGTTTCAACTCTAGAGTTGAGGTGGAAGAGCTTCTGCCATATTCTTACAGCTTTGGAGACATCAAGTTCAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013714