Os12g0502400

From RiceWiki
Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0502400| Description = Similar to Phosphoserine phosphatase (EC 3.1.3.3) (PSP) (O-phosphoserine phosphohydrolase) (PSPase) (L-3-phosphoserine...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0502400

Description

Similar to Phosphoserine phosphatase (EC 3.1.3.3) (PSP) (O-phosphoserine phosphohydrolase) (PSPase) (L-3-phosphoserine phosphatase)

Version

NM_001073361.1 GI:115488683 GeneID:4352281

Length

3572 bp

Definition

Oryza sativa Japonica Group Os12g0502400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19292113..19295684

Sequence Coding Region

19292466..19292591,19293229..19293282,19293358..19293507,19293859..19293952,19294472..19294579
,19294683..19294815,19294913..19295135

Expression

GEO Profiles:Os12g0502400

Genome Context

<gbrowseImage1> name=NC_008405:19292113..19295684 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19292113..19295684 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaaaatggttagtcagtgtatctctccgcggcagtcctttcgcgttcctcgtttttcatcagctcggcctacgctaagttcacgtttagcaattggctacgccaacccgtcgttttgcggtgttaaacgctcaaatcgtccgagttttatagcagcagcactggatgtaccaaaaagtatgtcctcccctaattcagagagctccctgcctttgaaagaggttatctgggcatggtgcaatgctgacgcggtgtgcttcgatgttgacagcacggtctgcttggacgagggtatcgatgagctcgcggacttctgtggggcaggccaagcggttgctgaatggacggctaaggcgatgactgggtcagttccgtttgaaaaggcattagctgctcggctatcgttgttcaagccatctttggggcaagttgaggactgcatggagaagcggccaccaagaatatctcctggaattgctgagcttgttaagatgctgaaagctaaaaatgttgatgtgtacctggtttctggaggcttccgacagatgatcaagcctgttgcaatgcagctcggcattcctcctgaaaatatttttgcaaaccagttactgtttggaacttctggagagtatgttggttttgacccttcagagcctacttcacgaagtggaggcaaagctgtagcagttcaaaacataagacagaagtgtggttacaggacactctttatggttggagatggtgcaactgatcttgaggctcggcaacctaatggagcagacttgtttatctgctatgctggtgtgcagatgagggaagcggttgcatcaaaagccgattggttgatctttgattttgacgaactaatgggctatttggtttag</cdnaseq>

Protein Sequence

<aaseq>MAKMVSQCISPRQSFRVPRFSSARPTLSSRLAIGYANPSFCGVK RSNRPSFIAAALDVPKSMSSPNSESSLPLKEVIWAWCNADAVCFDVDSTVCLDEGIDE LADFCGAGQAVAEWTAKAMTGSVPFEKALAARLSLFKPSLGQVEDCMEKRPPRISPGI AELVKMLKAKNVDVYLVSGGFRQMIKPVAMQLGIPPENIFANQLLFGTSGEYVGFDPS EPTSRSGGKAVAVQNIRQKCGYRTLFMVGDGATDLEARQPNGADLFICYAGVQMREAV ASKADWLIFDFDELMGYLV</aaseq>

Gene Sequence

<dnaseqindica>3094..3219#2403..2456#2178..2327#1733..1826#1106..1213#870..1002#550..772#atccatccggtcactcgccaactagtatccccattcgccgccgccgccgccgccttcgccgccggcgatacggtggtcagcgccgccgcggccgctcgtatctaaaggtgagaccacttgctgttcctttcctcgcagattcgctgcaagactaggatcggggttgggcggatgatttgggtggtagtggtgcctcaagaatgtcgcagaagttttatctgtctgattagagctctgagattacggatgcatctggatccggtttagggaggaactctagattattggttgatctgatagttgggaacaacttcgttggtgaggtgatgatggatgaacatgttgtgcgctgcttttcttatctagccgttttctctgaattttgtgtatcccttaaaaagggtgtagagcagctgaatgcatgtacaatctcatgcattttgttccttgacacaacattattttgttctcggtaatttagtaatgcgtgcttccgtcgcagtaatttgctcattgcatatttgcacttgatttgctgcttgcaggtatatggccaaaatggttagtcagtgtatctctccgcggcagtcctttcgcgttcctcgtttttcatcagctcggcctacgctaagttcacgtttagcaattggctacgccaacccgtcgttttgcggtgttaaacgctcaaatcgtccgagttttatagcagcagcactggatgtaccaaaaagtatgtcctcccctaattcagagagctccctgcctttgaaaggtatcgctggaaacctttagttttgtgtggtcatgctatggtgcctatgcaggcctgagtctcctaacaccgtgcatgcttcttctcttttcaccagaggttatctgggcatggtgcaatgctgacgcggtgtgcttcgatgttgacagcacggtctgcttggacgagggtatcgatgagctcgcggacttctgtggggcaggccaagcggttgctgaatggacggctaagtaaagatgctgacttttaaagctttgccaattaatccatggaaatttccattcaagcgttcaatttttattttattttttgaaaaaaaaaaaacatttccagggcgatgactgggtcagttccgtttgaaaaggcattagctgctcggctatcgttgttcaagccatctttggggcaagttgaggactgcatggagaagcggccaccaaggtaagctcctaagtatctaatgattcttaggtgtttcagcctttgggggggctgtagttactactagccagaactagatggtttgctttcttttgttttgtataactttcagtgaaaatacacagatcttctgcatttctcaaaaaataaaatcgctactatgtttccatttttgggatggccatgccataagagaatactaagttgtttttaatccttttctccacacgttttcatgttttattttttttcaaattggatacagaataacagaactacttgataacttcttgtttattctaaataaacaggaatttatatagctcgttgttcaaatattagctgtttctcgtaagaaactgaccctgactttttttataaatttgctacaaactatgatctatctagatatttgtgcgtcaagcagacacaacgttcatgttccttggatgtattgcgttgattgtatctagccttcacatcctactatattttatgcaaatgacattttatcgacagaatatctcctggaattgctgagcttgttaagatgctgaaagctaaaaatgttgatgtgtacctggtttctggaggcttccgacagatgatcaaggtataatgattccattgttggatgctttcccagtgacattccaggaaagtcaccgtacgtgctatactttgattttactccgccaacattctgttgttttcagctccaatctttactttaacttttgaataggtccactgctttagtattatgtgatgttttttgccccctcttgaggaaccgatttcaaaaaaattggaagaacaaaggaaggttgtggcaagaaatatttgatccatatttcttttgatgcatttacactcctggtttatgacaagctttagctattttcaagttgctatttcttcacccagagtcagtctttgacttaccctttgctctttccatcagcctgttgcaatgcagctcggcattcctcctgaaaatatttttgcaaaccagttactgtttggaacttctggagagtatgttggttttgacccttcagagcctacttcacgaagtggaggcaaagctgtagcagttcaaaacataagacaggttctgattttaactctccactctgccatgttgctgcttattaagcacattgcttatgtacctttgtgtgtgcagaagtgtggttacaggacactctttatggttggagatggtgcaactgatcttgaggtactattattgtgtccatagaacaatgatagccctacagtaggcatagcattaccattttcattatatgttaggagtacactgctgccacaaaaaaaaatgggataaatgttagcaagaaaatgcaaaaccacatatactgacacatgtattacactactaccttaggaatacaaagtattttgatacctaaggaagaccatcccaattccaaatcaataagagactgaatggccaatttgaattttaaagttcacataaatcgtgacaaatttgttgatgttcatagtatgtattaacgtgtatatgtaggagaaacattctcatgttaacaaactatttatgctttcatttcatttagcaaaggaaacataaaaggggtcgaactatttttcttcctcagttactttgactaatgagatgcatggttttttccttcatattttgatatgagcttttgcaatgaactttttccttcatattctgattttagcatggtgatgctgtatcgctgtattggctccatgagtagattagttcataattttgtattggttaactgttggtatatcataaaggaacttctgtgtggatggaacttcagaaacatcttaaactatgtttttcatgtgtgcaggctcggcaacctaatggagcagacttgtttatctgctatgctggtgtgcagatgagggaagcggttgcatcaaaagccgattggttgatctttgattttgacgaactaatgggctatttggtttaggttttttttttcctagaaaccaccagttcttattttgtctattgatgagtaaataactgtccatggaagcacttcagagaatcagagctacacatgtcaaggcgtttaacagggatagtaataacatgtgtcaagcgaaggtgtttgatctcagttaaaaattcctctatctttctatcaattttccttttcaagccaatggcaccaagattccagagtgtcaatacttaccttgtgtgttgttttgtgatttatcattggcctgttcagaacagggaggatgtcaccctagattgatgccttcacagatgttgtaatgtgaaagcttttatagtatgcttgtctttctttct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0502400, RefSeq:Os12g0502400