BGIOSGA013728

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Revision as of 10:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013728| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013728, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA013728

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013728, complete gene.

LocusTag

OSJNBB0021G19.1

Ensembl Transcript ID

BGIOSGA013728-TA

Ensembl Protein ID

BGIOSGA013728-PA

Length

6723

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37466704..37473426

Sequence Coding Region

37466704..37466798,37467744..37467846,37467944..37468013,37468095..37468133,37468233..37468350
,37468456..37468513,37468600..37468664,37469780..37469837,37469924..37469988
,37470083..37470089,37470180..37470240,37470693..37470752,37470851..37470870
,37470952..37471017,37471220..37471387,37471466..37471723,37472190..37472402
,37472916..37473187,37473279..37473426

Genome Context

<gbrowseImage1> name=IndicaChromosome03:37466704..37473426 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:37466704..37473426 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCGGTGGGCCGCCGGGATCTGCGCGGTGGCGCTGGTTTGGCTCGCCGCGGCCGCCGCGGGAGACCTCGAGCCGGACGAGCTAGAGCGCGCATTTCCAATTGTGGAGCCAGATTATGGCCACACTAAGCTCCGTCTCTCACAACAAGGTCTAGACGCAATTCGAAGGATTGAAACTCCTATTGCTGTTGTTGGTGTCATTGGTCCATATCGATCTGGAAAGTCTTTTCTCCTCAACCAGCTTCTCTCTTTATCATGTGAAAAAGGTTTCGGAGTTGGTCATATGCGAGATACTAAAACTAAAGGTATATGGATTTGGGGTACACCTGTTGAAATGGACATTGATGGTTCAAAAGTGTCTGTCCTTTACCTTGATACTGAAGGATTTGAGAGTGTTGGGAAGTCAAATGTATATGATGATAGGATATTTGCTTTGGCAACTGTCTTGAGTTCAGTGCTAATCTACAACCTTCCTGAGACGGTGCGTGAAGCTGATATATCTAGGCTCTCATTTGCTGTTGAGATTGCAGAAGAATTCTATGGAAGGATATTTGCTTTGGCAACTGTCTTGAGTTCAGTGCTAATCTACAACCTTCCTGAGACGGTGCGTGAAGCTGATATATCTAGGCTCTCATTTGCTGTTGAGATTGCAGAAGAATTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAACCAGCAAAGCTTCTTTGGCTTATCCAGAGGGATTTCCTGCAAGGAAAATCTGTTCAGCAAATGGTCAATGAAGCCCTCCAACGGGTACCTAACGAAAGTGGGGACAAATATATTGATGAGGTTAATCAAATTAGAGATTCTTTGGCAGTTATGGGCAACAACAGCACTGCTTTTAGCCTGCCCCAGCCGCATCTACAAAGAACAAAGTTATGTGACATGGATGACAGAGAGCTTGACCCCTTATATGTAAAAAGGCGGGATGAATTGAAGCAGGTCGTTGCGTCCATCACAAGACCAAAAATTGTGCAGGGGAAAACTCTAAATGGAAAGGAATTTGTTTCTTTCTTGCAGCAGATTCTCGAGGCATTAAATAAAGGAGAGATTCCATCAACGGGATCTCTTGTTGAAATTTTCAACAAGGCCATTCTTGATCGCTGTCTGAAGGTGTATAGGGATAAAATGGATGGCTTACGTCTACCAGTACCAGTAGACCGACTGCAACAAGTTCATGAGACAGCAATTGATCAAGCTAGAATGCTGTTTGATAAGCAGCACTTTGGTAAACACCATGCTGCTCAGTCAATCCTTAAGCTTGATGATGAGATAAAAAAGGTGTACAGAAACTTCCTTCTAGCAAATGAGTATCAATCATCAAAGCTGTGTGAAGCACGCTTCTCAGAATGTGAAGATAAAATGGACCACCTTCAAGTCTTGAAGCTCCCTTCCATGGCAAAGTTCAATGCAGGGTTTTTTCACTGCAATCGAAGTTTTGTAAGGGAATGTGTGGGCCCTGCAAAGGAAAGCTACGAGCGCAGAATGTCAAAGATGCTTGTCAAGTCTCGTGCTCTTTTTATCAAGGAGTACAATAACAAGCTCTTCAATTGGTTGGTAACCTTCTCCCTAGTCATGGTGGTTATTGGGCGCTTTGTCATCAAGTTCTTTTTACTTGAGATTGTTGCCTGGGTGATGTTCATCTTCCTGGAGACGTACACGAGGATGTTCTGGTCAGCAGAGTCATTGTACTATAATCCAGCTTGGCACATCATTGTCTCTTCGTGGGAAACTATCGTATATAGCCCCATTCTCGATCTGGACAGATGGGCGATCCCCATTGCCGTATTATTGTCTTTTTGGCTTCTTTACTGGCGATGTTTCGGTAGAAGAAAACGGGGCAGCCGATCGTCACTCCTGCCACTCCACAACAAGATCTCCCACAAGAACTCAACGCGCCCGAGATCAGACTAA</cdnaseq>

Protein Sequence

<aaseq>MGRWAAGICAVALVWLAAAAAGDLEPDELERAFPIVEPDYGHTKLRLSQQGLDAIRRIETPIAVVGVIGPYRSGKSFLLNQLLSLSCEKGFGVGHMRDTKTKGIWIWGTPVEMDIDGSKVSVLYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVREADISRLSFAVEIAEEFYGRIFALATVLSSVLIYNLPETVREADISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNESGDKYIDEVNQIRDSLAVMGNNSTAFSLPQPHLQRTKLCDMDDRELDPLYVKRRDELKQVVASITRPKIVQGKTLNGKEFVSFLQQILEALNKGEIPSTGSLVEIFNKAILDRCLKVYRDKMDGLRLPVPVDRLQQVHETAIDQARMLFDKQHFGKHHAAQSILKLDDEIKKVYRNFLLANEYQSSKLCEARFSECEDKMDHLQVLKLPSMAKFNAGFFHCNRSFVRECVGPAKESYERRMSKMLVKSRALFIKEYNNKLFNWLVTFSLVMVVIGRFVIKFFLLEIVAWVMFIFLETYTRMFWSAESLYYNPAWHIIVSSWETIVYSPILDLDRWAIPIAVLLSFWLLYWRCFGRRKRGSRSSLLPLHNKISHKNSTRPRSD</aaseq>

Gene Sequence

<dnaseqindica>1..95#1041..1143#1241..1310#1392..1430#1530..1647#1753..1810#1897..1961#3077..3134#3221..3285#3380..3386#3477..3537#3990..4049#4148..4167#4249..4314#4517..4684#4763..5020#5487..5699#6213..6484#6576..6723#ATGGGGCGGTGGGCCGCCGGGATCTGCGCGGTGGCGCTGGTTTGGCTCGCCGCGGCCGCCGCGGGAGACCTCGAGCCGGACGAGCTAGAGCGCGCGTGAGTATCCGATTCCCGCTTCGTGGTTCCTGCTTGGTTGGTGGCTGCGTCAATCTCGGTGCTCGTGTTTTTTGGGGGGTGGGATTTCGCGCTGGATTGCGCAATGCTTTCGTATAGTGCTAGCATTTGCGCGTGTATCGATTGGCCTTGAATGATTTGGGTGGATGCATGCAACGCAATGGCAGTTCGTTGTAGATTGGTGAGCCGCGCTCAGCTACGGGATTCGTACGGTGCAATGAAGCTAATTCTGGTCGGGTTCTCGTTGCCAATCTGTCATCGTTTTGTCATGCCTGTCTCATGCGGCCATTGCAGGGGAGTTGAAAGAGCTAGTTAGGTGAGATGTCGAGGAATATTAGGTGGTTGGTACATTGGGGCTTCCAGTACATGAAAAATGCCAAGTCGATGGGTGTTTTAGAAATTCGTTAGTGAATGACTTATGAGCGATTGCAACTGTTGCAACCTTGAAGCAGTATTGAATTTTCAATTTCAGTTGAACAATGACTAATTTGATGAATTATACTCTTCCTGTAGTTGATTGATGAATGCACTTTTATTTTTTCTCTACTTCTCCATAGTTATATTAAGATATGCTTTAGGCTTATGGCTTGCCGGATGGCTGGAAGTCGATTAATTTCTCTCAAACATCACTAATTTTGGAAGAAATTTACATTTCTAATTTCTCTCAAACATCACTAATTTTGGAAGAAATTTACATTTCCTTGTCTGTTAAATGAGCGCAAGTTTGACGTAGATTATGCCAGACTGCAAACAAACATATATAAAGGTGTTCCGTAAATAACACTGGAGGGTTCAGTGAGTTGACTGAAGAGGTTACTTAATCCTTAAAATCCTCATGCAGACAGTTTTGTTCACTTGCTACTATGATGTTTGTGAATTTTCTGCTGTAAACATGGTATTGAGTATCAAATGTGTATACCTGTACAGATTTCCAATTGTGGAGCCAGATTATGGCCACACTAAGCTCCGTCTCTCACAACAAGGTCTAGACGCAATTCGAAGGATTGAAACTCCTATTGCTGTTGTTGGTGTAAGTTTGAACTTAGTATTTGGAAGAGCTTTACTTTGACTGAAGCACAATATTAAGGTATGCTGGTGAATAAAATTGATTTTGTTTCTCAACGTAGGTCATTGGTCCATATCGATCTGGAAAGTCTTTTCTCCTCAACCAGCTTCTCTCTTTATCATGTGAAAAAGGTAGACTCTACTCCTGGTGTTTGAGATGCATAATAGAACTAAGAGACCTTTAGGGCTAATGAAAACATGGCAACTATGCAGGTTTCGGAGTTGGTCATATGCGAGATACTAAAACTAAAGGTGGACATCTTTTTTGCTTGTTTAAATGTCTTTAATCTGTATTTCTATTTGCTGATTGATGTCTAACAAGCTATAATCATACTTGTTCAATTGTTACAGGTATATGGATTTGGGGTACACCTGTTGAAATGGACATTGATGGTTCAAAAGTGTCTGTCCTTTACCTTGATACTGAAGGATTTGAGAGTGTTGGGAAGTCAAATGTATATGATGATAGGTCTGTGTGCAGAAATGGAATGTGAAGAAGTTTCCCATTTACTTTTTCTATGATAGAAAGGTTACATTGTTGTTGGTATCATTTTATTCATTTCTTTTGTGGCAGGATATTTGCTTTGGCAACTGTCTTGAGTTCAGTGCTAATCTACAACCTTCCTGAGACGGTAATCTATCTCTCTACTCATATACACGCATAAACTCACTTGTCTGTTTGTGTGTGCTTAGACTTTTACTTGTTATGGCATTGCAGGTGCGTGAAGCTGATATATCTAGGCTCTCATTTGCTGTTGAGATTGCAGAAGAATTCTATGGAAGGTTTGTTTGCCTCTTTGTATTTTCATTTGCAGTTTGCTCCTTTCTTATCACTAACAATTTTCCTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATGCGACCCCTTCCCATGGGAATAGCGTGATTCCTCTCTGCTCTCTCTTTACCCAGTGGAGAGACCTTTACCTCGCTCTCACTTCACCTCCACAAGATTTCACAATGGTAATTTGTCTGGTTAAAATTTCAGAGCCAATTCGTCCTGCTTAGAGCAGGTATAGGTAAAATAGCATCCTATAAGCCAGCCTGGTATAAATATATTTTAAAGAGATAAAGAAAGAGAGAGAAGAGCAGCGGGTTACAGATCTATAGCTACTAGTTACAGTACGGACTCCAAGACGTAATATTACGGATACTAAAACGTAATGTATGTATGATATGTGAGCAAGTATTAATAGTATAGTAAACAACTATTGTATGAACTTACTATTATATTGGCTATAGATGATTTGGATATAGGAGTTGGCTATACTATTAAACTTGCTCTCATGAATGTTCCAGTAAAAAACTCAGCGAACCAATTTCTGCGTTCCAAACAGTGCCTAGTACAAGAAGTTCACGTGAACCTGTTTTCTTTACTTGTGTAGGGGGAAAACGCTAAAGCACAGTGCGGTAGTAGTACTCGTGCAACTGTTGGTTAATTGGACACGCCTAAGCAATCGTGCAGGGGAAAAAAAAGTGGGTGACGAATTGTGCTACGAGCTTCGAAGTGTGCTACGAGCACTTCGTGCTTGGCAGTGCCCCCCGGATCAGACGACGCGAGCGATCTCGGGGAAGGATGATGCCTTTCTCCTTCTCCTAGTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATGGACATTGATGGTTCAAAAGTGTCTGTCCTTTACCTTGATACTGAAGGATTTGAGAGTGTTGGGAAGTCAAATGTATATGATGATAGGTCTGTGTGCAGAAATGGAATGTGAAGAAGTTTCCCATTTACTTTTTCTATGATAGAAAGGTTACATTGTTGTTGGTATCATTTTATTCATTTCTTTTGTGGCAGGATATTTGCTTTGGCAACTGTCTTGAGTTCAGTGCTAATCTACAACCTTCCTGAGACGGTAATCTATCTCTCTACTCATATACACGCATAAACTCACTTGTCTGTTTGTGTGTGCTTAGACTTTTACTTGTTATGGCATTGCAGGTGCGTGAAGCTGATATATCTAGGCTCTCATTTGCTGTTGAGATTGCAGAAGAATTCTATGGAAGGTTTGTTTGCCTCTTTGTATTTTCATTTGCAGTTTGCTCCTTTCTTATCACTAACAATTTTCCTGAAAATTTTGATGTGCATCATGGTGAGCAGAGTGAAGGTAATGTTCCATCTCCATGGATCTATGTGGATAATTGAAATAGAAATAGAATTCTGTGAAGCTGTTAATGACATATGTTTGTTTTTTCAGGGGCAAGATGTTGCTTTTGAACCAGCAAAGCTTCTTTGGCTTATCCAGAGGGATTTCCTGCGTAAGTTGCTTCTTGCTTCTTCTTTTTTGACTATAAGCATGGTTTAGCTGTTTAGGTTCTCATTTTGTTTGTATAGAGGTTCATACTGGCATCTGAGGTTTAACCCAGATACGATTGATGGTCACAATTTTATACTTGAAACTTCACATGGATACGTCACCATTTTGTTTGGGTCTCAAATGTGTGAGAGGTTGACTCTTTCAAACCATTTAATAGACACCTAGACAGAAATGGTGATACAAACATCCAGTAAGAAGTGTCATACTGCTGAGGTATCCATTTTATGTGACTGTGTTCTATGGCAAGATGCCTATTTCATAAGTATCCATGAGTGGCCATGGTTCTATTTTTTTCCCCAATTGGTCTAAAGTGTCTGATATTTTATCTAAACTGTTTTTTTTTTAAAAAAAATATATGCAACTTTCTCTGAGTGCTTTAACTTTTGTGAGCAGAAGGAAAATCTGTTCAGCAAATGGTCAATGAAGCCCTCCAACGGGTACCTAACGAAAGTGGTTAGTACAAGTTGCCTTTTTGACTATTTTATAGCTAATGAATATCTAGAGTTGTCTTGTGCATTGTTGGATTGATCTTCTTTAATGAATTTCTGCAGGGGACAAATATATTGATGAGGTACAGTTATTTACAGTGCGTACATTTTTTACCAGAAGACAATGAATCCCACTGCCTCAACTTGATTTCTGTGTTTTTTAGGTTAATCAAATTAGAGATTCTTTGGCAGTTATGGGCAACAACAGCACTGCTTTTAGCCTGCCCCAGGTGCATTTCCGACATCCATGCAGTGCCTCATTAATCTTATTTATAGTTTTATACGCTTCTCGCTCCATCAAGCACTTTTTACCGTTTAACATTTCTATTATGTAGCTGATAAGCATCACGATTTTTCTGTATGGTACGATTGATTGTGATAATTTTGTCTTGTTATATGTTAAGTATGAACTATCAATGTGTCTTTTTACAGCCGCATCTACAAAGAACAAAGTTATGTGACATGGATGACAGAGAGCTTGACCCCTTATATGTAAAAAGGCGGGATGAATTGAAGCAGGTCGTTGCGTCCATCACAAGACCAAAAATTGTGCAGGGGAAAACTCTAAATGGAAAGGAATTTGTTTCTTTCTTGCAGCAGGTAGAACCCTTACCGTCATTATTCTTGACATCTCTCTAATCCATTAGATTATTTTTATTGACTTCTCTTGTGTTCCAGATTCTCGAGGCATTAAATAAAGGAGAGATTCCATCAACGGGATCTCTTGTTGAAATTTTCAACAAGGCCATTCTTGATCGCTGTCTGAAGGTGTATAGGGATAAAATGGATGGCTTACGTCTACCAGTACCAGTAGACCGACTGCAACAAGTTCATGAGACAGCAATTGATCAAGCTAGAATGCTGTTTGATAAGCAGCACTTTGGTAAACACCATGCTGCTCAGTCAATCCTTAAGCTTGATGATGAGATAAAAAAGGTTTGTTAAAAACACAAAATCCTTTCTTTAATACGCATGTAGTCTTAACACTATTAGTTTGGAATGCATTTTAATACAGAAGAAAAAAACTAAGATTAATGAAGTGTTATGGATCCTCACATGATACTGCATTAATTTTTATGCTATATAAAACTATTTTTGGAATTGATCCCTCGACTGCCATTTGGTAGTTGTAGTCTTAACACTATTAGTTTGGAATGCATTTTAAGACAGAAGAAAAAAAAACTAAGATGTAATGAAGTGTTATGGGTCCTCACATGATACTGCATTAATTTTTATGCTATTATAAAACTATTTTTGGAATTGATCTCTCAACTGTCATTTGGTAGTGAGGTTTTTTTTGCTAACCTTTATGTACCATTTGTTATATGTCTTGTGATCGACTTTCACTTCTATCTCTTATAGAAGATAATATATTTACATACTTACAGGGTATACCTTGTAGGTGTACAGAAACTTCCTTCTAGCAAATGAGTATCAATCATCAAAGCTGTGTGAAGCACGCTTCTCAGAATGTGAAGATAAAATGGACCACCTTCAAGTCTTGAAGCTCCCTTCCATGGCAAAGTTCAATGCAGGGTTTTTTCACTGCAATCGAAGTTTTGTAAGGGAATGTGTGGGCCCTGCAAAGGAAAGCTACGAGCGCAGAATGTCAAAGGTATATAACATGTTTCCTTTACTGCAGTCCCAAGATAGTTTGCATGACATCTATGGAATAACCCAAGGATGAAATGTGAAATTCCATTTGCATCCTGTACTTTTCCATTTGCTCAGTAATTGAGGTAGGAGCTCTTTTCGCTTATTTATAGAAACGTACAACTTCTTCACCAACTCAACACATTTTACCATTTTCGCATATAGTTACTCCTGGAGATCAACAAATTTATCTCATATTGCCCTTTGGAAAATATTGCAACATAGTGCTCTAGTTCCTTTTTCTGACCTATCAATAGATAAAAGAATCATGTAAGATAGTGAGCTGATGCATAAGTTTAGGGCCTTGCCATAACATATGCTGTTCTTGCCTTGGAAAGCAGAGAACAAACTGCTTTTAGAGATAATTATGCGAAGTGATGTATTACCCCTTTTTCTTGTCAATCTGCAGGTTGTTTCTAACTCTTGCTAATTATGATATTTATCTAAATAAACTCTGATATGATATCGCATACAGATGCTTGTCAAGTCTCGTGCTCTTTTTATCAAGGAGTACAATAACAAGCTCTTCAATTGGTTGGTAACCTTCTCCCTAGTCATGGTGGTTATTGGGCGCTTTGTCATCAAGTTCTTTTTACTTGAGATTGTTGCCTGGGTGATGTTCATCTTCCTGGAGACGTACACGAGGATGTTCTGGTCAGCAGAGTCATTGTACTATAATCCAGCTTGGCACATCATTGTCTCTTCGTGGGAAACTATCGTATATAGCCCCATTCTCGATCTGGACAGGTAGCCTTCTTGCTCCAAGCTTGCACGCGTAATTATCAGCTTACATGTCATTCTTGTATTAATCAGTTCCGTCATGCAATGTTTTATGCAGATGGGCGATCCCCATTGCCGTATTATTGTCTTTTTGGCTTCTTTACTGGCGATGTTTCGGTAGAAGAAAACGGGGCAGCCGATCGTCACTCCTGCCACTCCACAACAAGATCTCCCACAAGAACTCAACGCGCCCGAGATCAGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013728