BGIOSGA013729

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Revision as of 10:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013729| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013729, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013729

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013729, complete gene.

LocusTag

OSJNBA0094F01.11

Ensembl Transcript ID

BGIOSGA013729-TA

Ensembl Protein ID

BGIOSGA013729-PA

Length

3548

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37522666..37526213

Sequence Coding Region

37522666..37522893,37523031..37523126,37523225..37523347,37524140..37524205,37524565..37524630
,37524718..37524792,37525983..37526213

Genome Context

<gbrowseImage1> name=IndicaChromosome03:37522666..37526213 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:37522666..37526213 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGGCAGCAGCCGCAGCAGCAGGGCCCACCGGAGGACGACTTTTTCGACCAGTTCTTCTCCCTGACCAGCTCCTTCCCTGGCGCCGCGCCGGGCGGCCGCGCCGCCGGTGACCAGCCCTTCTCCCTCGCGCTCAGCCTCGACGCCGCCGCGGCGGCCGAGGCGTCCGGGAGCGGGAAGAGGCTCGGGGTCGGCGATGACGCCGAGGGTGGCGGCAGCAAGGCGGATCGGGAGACCGTGCAGCTCACCGGACTCTTCCCGCCGGTGTTCGGCGGCGGCGGCGTGCAGCCGCCGAACCTCCGCCCCACCCCGCCTACCCAGGTGTTCCACCCGCAGCAGTCGAAGCAGGGCGGAGCAGCCGTCGGGCCGCAGCCGCCGGCGCCGAGGCCGAAGGTGCGAGCGCGGCGTGGGCAGGCGACCGACCCCCACAGCATCGCGGAGAGGCTAAGAAGAGAGAGAATAGCAGAAAGGATGAGGGCCCTACAGGAATTGGTCCCCAATACAAACAAGACAGATAGGGCAGCTATGCTAGATGAGATCCTTGATTATGTGAAATTCCTGAGGCTGCAAGTAAAGGTTTTAAGCATGAGCAGGCTGGGTGGCGCGGGTGCTGTTGCGCAGCTGGTTGCTGATATTCCACTTTCAGTTAAGGGGGAAGCAAGCGATAGTGGGGGCAACCAACAGATTTGGGAAAAGTGGTCAACGGATGGCACAGAAAGACAGGTAGCGAAGCTGATGGAAGAAGACATCGGGGCAGCGATGCAATTTCTCCAATCCAAAGCACTCTGCATGATGCCAATCTCGCTCGCCATGGCAATCTATGACACACAACAAACACAGGATGGACAACCAGTGAAGCACGAACCCAACACTCCTTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MAGQQPQQQGPPEDDFFDQFFSLTSSFPGAAPGGRAAGDQPFSLALSLDAAAAAEASGSGKRLGVGDDAEGGGSKADRETVQLTGLFPPVFGGGGVQPPNLRPTPPTQVFHPQQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEASDSGGNQQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQQTQDGQPVKHEPNTPS</aaseq>

Gene Sequence

<dnaseqindica>1..228#366..461#560..682#1475..1540#1900..1965#2053..2127#3318..3548#ATGGCCGGGCAGCAGCCGCAGCAGCAGGGCCCACCGGAGGACGACTTTTTCGACCAGTTCTTCTCCCTGACCAGCTCCTTCCCTGGCGCCGCGCCGGGCGGCCGCGCCGCCGGTGACCAGCCCTTCTCCCTCGCGCTCAGCCTCGACGCCGCCGCGGCGGCCGAGGCGTCCGGGAGCGGGAAGAGGCTCGGGGTCGGCGATGACGCCGAGGGTGGCGGCAGCAAGGCGGTGAGTGCGCGCGCGCGCGCAATCCTCTCTCCCTCTCGCTAACTTTCCCCATTTTTGCTTTTGCGTTGGCTCTCCTCGTTCGAGTGGGAACGGAGGCGCGTGTGCTTGCGTGATAAGCTTCGAGCTCGCCTCTGTAGGATCGGGAGACCGTGCAGCTCACCGGACTCTTCCCGCCGGTGTTCGGCGGCGGCGGCGTGCAGCCGCCGAACCTCCGCCCCACCCCGCCTACCCAGGTGCTCTGTTGCAGCAGCGGATTGTGTCTCAGTTCGAAATCGGCAGAGCTGGTGCTAATTTTTGTTGTATTTGGGCGGCCTTATGGCGAATTTTTCAGGTGTTCCACCCGCAGCAGTCGAAGCAGGGCGGAGCAGCCGTCGGGCCGCAGCCGCCGGCGCCGAGGCCGAAGGTGCGAGCGCGGCGTGGGCAGGCGACCGACCCCCACAGCATCGCGGAGAGGGTAATCAAATCAGTTCCCGCAGTTACACTCTCTTAGCTTATGGTCTTTCATCTTGGGTATTTTACTGTTGAGAACTTGTGATCTGCATAAGTCACTGTACCATTCAGACATGCTGTTTGGCGTTTGTAAGGTGATCAGGGTTTAAATTTCAATGCAAATTTTTGCTAGGTTTAGAATTGGATTTGGTGGTTCCTACATGCTTGTAATGCAGAGGAAATAATCAGTTCTCTCATGCTACGAGTGAGTCACCGAAGCAGTTCTGTTGTAATGTGAGACTGTGAGTGCAATAATGCACTCTCTTGTTAGGCAAGTCGGATCAATTAGGACTTTCAAATTCGAAGGGATTGTCACCCGTGATTTTTTTCTCAGATAAATGTACAGAACAAATCCAATTTGTAAGAAAAATATAGCATGTTCTAAAAGAGGATGTTACTTTAGATAGATGATGGCCGGCCATTTGGCGCAGTTATAAGGTGTTTTCCTTCTGGTCTGTACTATTATACCACAAGTCTTATCTTTTTGACAATTGATATGTCATGCCGCAATCCTGTCATATAGCAAATGTCATGTAATTGTTATCTAGCTATAGAATGCTTCTGCTTTAAGATAGGTTCTCAGTACTTTGTTTCTAGCAGTTGTAGATGTGTCCGATGCTCATTTGCTGTTATTTATATGAATGACCACCTTACTTTAGGCTGCATATTCTCACTTTTCATTTTTTTTTTTAATTTTTGGACAATTCTTCTAAGTGTTTGATCAGCAGTGCTCTGAAGCATATTTGTTCTGATGCAGCTAAGAAGAGAGAGAATAGCAGAAAGGATGAGGGCCCTACAGGAATTGGTCCCCAATACAAACAAGGTAATATTATTTGTTATACTTTTAGGTTTTATTATAAGGGTAAAGACTTCTGTGGTTCACATGCTAGCCATTGAAAAAATTTTGGCAAGTGGTTTGGGTCATGATGTGCTCACAATATTATATTAATGCTTTTTTAATATAAATTTTCTTCTTTAAAAGAGTGTTTCGGTTCACTGAGAACCATGCGATCAAATCTTAGTATGCTGTCCCTTTTGAGATAAGCAAGAGCGCATCCTTAGGGTTATATGCATGCTTAAAATAACATGTGATTTTACTACTATAATACAGAGTTCCGTAAATTGCAACATCAGAGGTTGACTATGGGGGAAATAACTCTGATGTCTTCTTGAACTATGCAGACAGATAGGGCAGCTATGCTAGATGAGATCCTTGATTATGTGAAATTCCTGAGGCTGCAAGTAAAGGTTTGGTTCACTATGCTATTATCTAGTAAGCATAAACCACATTTTGTGTTTTTAGTTGTTTGATAGAGCATGATTCTATGGTGGTAGGTTTTAAGCATGAGCAGGCTGGGTGGCGCGGGTGCTGTTGCGCAGCTGGTTGCTGATATTCCACTTTCAGTTAAGGTAAATCTGTGGCCATTAACTAATATATAGCACTGTGCCCAGTTACTTTCTCTCGACTTAGTTTTTACTGCCATTCTTAATATACTTCCTTCGGTCAAAATTATTTGACGTTGGCTATGTGGTTTATTTGTTAGTTCAAGGTTTTCTTCTCTCTTGTATAAAAGCAATACATCAAGCATATCATCCTCATAACTATGTATAGTAAAATTGTGAACTAATTGCTCTCTGCAGTGCCTATTTTTCATTCTTTTAAATTATATGCTACTTGTTCTTGCCCATTCTCTCTCCCCCTTCTCCTCCTCTTGCTCCTCCCTCCTCTCTCTGTGTGTGACTGCAGAGAAATTGATGGATGTTTGCTACATGGGAAAGCATCAGCCTGTACTTAAATCAGATCTCCATACAAAATAAAAGCACCTTTGTCTTTGTTTCATACTGACAATTACTCTGTATTTCCACTTTATTCAAACAAAATATGAATCAGTTTTCCCTTGCAAGAATCATTCTACTTCTGATTCCTCTATTTTTCTCTCGTGAAGTTTTTCACTTCTTTCTTCTAGACAGTGGTGCTGAAAGGCAGTTCCCACTCACCACCTTATTTTCACTGCTGGCCTTTTATTGATTTCTTGATCTAATTGTCTATGTCAGTGCAATCCATTTGTACTTTTGCTATCAGTGACAGTGATTGTAGCTTTTCCTGTCTCTTCTTGAACATAAAACTTCTATGTCTATAGTTTAACAATAATGAATAGCGTTAAAGTCTTAGCAAGATGAAGATATGACAGATTTCTACCATATGACAACATGTCTTGTAGATCCCACATTAAAATCTCTCTCATCTCTAGTTTCCTGATGAGCACAGTGTCTCCATTAGGCTTTTGCTTGCTTCAGAGCCCAATTACAAAGACTTGTATACTTCCTGATCCCCATCGATCGCTCCATAGTACTCCTTCCGTTTCACAACGTAAGTCATTCTAGTATATCTATCTAGATTCATTAACATCAATATGAATGTGGAAAATGCTAGAATGACTTACATTGTGAAACGGAGGAAGAAGCAAAAGAATGGTGTGCATTATTTCTTTCGTGAACGATCACACCTTCACTCAAGGAATCAATTTGAGAGTCCTTTTCCGTCTCTGCTCTTTCATATCTTTTGGTTGTTAAACTGTATCTTGCTTTATTTTCGTTAGGGGGAAGCAAGCGATAGTGGGGGCAACCAACAGATTTGGGAAAAGTGGTCAACGGATGGCACAGAAAGACAGGTAGCGAAGCTGATGGAAGAAGACATCGGGGCAGCGATGCAATTTCTCCAATCCAAAGCACTCTGCATGATGCCAATCTCGCTCGCCATGGCAATCTATGACACACAACAAACACAGGATGGACAACCAGTGAAGCACGAACCCAACACTCCTTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013729