Os12g0502700

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0502700| Description = Heat shock protein DnaJ, N-terminal domain containing protein| Version = NM_001073363.1 GI:115488687 GeneID:4352284| ...")
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Gene Name

Os12g0502700

Description

Heat shock protein DnaJ, N-terminal domain containing protein

Version

NM_001073363.1 GI:115488687 GeneID:4352284

Length

3534 bp

Definition

Oryza sativa Japonica Group Os12g0502700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19302826..19306359

Sequence Coding Region

19302928..19304622,19305877..19305935,19306066..19306135

Expression

GEO Profiles:Os12g0502700

Genome Context

<gbrowseImage1> name=NC_008405:19302826..19306359 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19302826..19306359 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccgcggcggcgccgaagcggtgctactacgaggtcctgggcgtcccccgcgactgctccccggccgacatcaagctcgccttccgccgcctcgcgctctccctccaccccgacaagcagccccccggctccgacgtcgccgccgccaccgccgccttccaggagctccagcacgcgcactccgtcctctccgacccccacgagcgctcctactacgactcccaccgctcccagatcctcttctccgaccaccacccctcctccggccccggccgcggcggcggcgtcgcctccgcctccgcgtcccccgtccccgacctcttcgccttcttctcctcctccgccttctccggcttctccgactccggccgcggcttctacaaggtctacggcgacgtcttcgaccgggtcttcgcgcaggagctcgcctacgcccgccgcatgggcatgcccgccgacgccgtccccacgccgccggtgatcgggaacctcgattccccccacgcgcaggtcgccgcgttctacagctactggctcgggttcggcaccgcgatggacttcgggtgggcggccgagtgggacgccgcgcggggggagagccgccgggtgaggcggctcatggaggaggacaacaagaaggcgacgcgcaaggcgcggcgggagtacaacgacgccgtgagagggctcgccgcgttctgcaagaagagggacaagcgggtggtggacatggcgctgaagaagaaggtggaggaggagaagaggaaggcggaggaggcggcgaggaagaaggaggaggagaggaggaggaaggagcgagcgatggcgtaccaggagcccgagtgggcgagggtggacgaggatgaggcggcggtgtttgaggacgacgaggaggaggagacgagggcgaagaggaaggaggagctgtactgcgtggcgtgtaataagaagttcaagtccgacaagcagtggaagaaccatgagcagtcaaagaagcatagagataaggtgtccgagctgaggatggtgtttgaagaagaggaagaagctttgaaggatgctgaagaagaggagccagaagaagttgatgtggggtttgattttcagcctgcacaggaatcagaggagagtgaattttcagatgctgctgaagagttggctgacgagttgagcgagggattggaggtgcgtgatgaagaagagaagggtgataagcacttgggtaatggggaacaaaaggttggttcatatgatgaaaccagtgtgttagaggaaatgctatcgaggtctaggcgcaagaataggaagagtggttttgtcgctcctcaggaggaagcttcaccagctggtgccatggatgatgatgacgatgaggatacaagctatgagattaataatgtcaaaaagaaaggacgccggagacgggcagcaaagaagggaggtacttatgctgataatgggcaaggtaggaagagtgagaatcagcctgaggaatccaggcataataatgatgaaaatggtgctgatgataagatggaaggtccatcttctaatgaagacagtgctgcagcaagtaaagaagatcagcagaaaggaaaaaccggtaatactaaaaagaacaagaaaggcacagaaaagaacacaactatatcttctgaacaaaagggtacatcgaagggaaagaagcaaaaggaggtttcaaaggcacccagtaatgactgtgaaacgtgtggatcaacgtttgactcaaggaacaagttgttttctcacttggaagaaacaggtcatgcaatgctgaagacacgacagaaaaatcgctga</cdnaseq>

Protein Sequence

<aaseq>MASAAAPKRCYYEVLGVPRDCSPADIKLAFRRLALSLHPDKQPP GSDVAAATAAFQELQHAHSVLSDPHERSYYDSHRSQILFSDHHPSSGPGRGGGVASAS ASPVPDLFAFFSSSAFSGFSDSGRGFYKVYGDVFDRVFAQELAYARRMGMPADAVPTP PVIGNLDSPHAQVAAFYSYWLGFGTAMDFGWAAEWDAARGESRRVRRLMEEDNKKATR KARREYNDAVRGLAAFCKKRDKRVVDMALKKKVEEEKRKAEEAARKKEEERRRKERAM AYQEPEWARVDEDEAAVFEDDEEEETRAKRKEELYCVACNKKFKSDKQWKNHEQSKKH RDKVSELRMVFEEEEEALKDAEEEEPEEVDVGFDFQPAQESEESEFSDAAEELADELS EGLEVRDEEEKGDKHLGNGEQKVGSYDETSVLEEMLSRSRRKNRKSGFVAPQEEASPA GAMDDDDDEDTSYEINNVKKKGRRRRAAKKGGTYADNGQGRKSENQPEESRHNNDENG ADDKMEGPSSNEDSAAASKEDQQKGKTGNTKKNKKGTEKNTTISSEQKGTSKGKKQKE VSKAPSNDCETCGSTFDSRNKLFSHLEETGHAMLKTRQKNR</aaseq>

Gene Sequence

<dnaseqindica>103..1797#3052..3110#3241..3310#aggctcgccattaaacaacactcatctccccctcccccttgaaaccctagctccgcttcgccgtcgtcctcctcctcctccccggcggcggcggcggcggccatggcgtccgcggcggcgccgaagcggtgctactacgaggtcctgggcgtcccccgcgactgctccccggccgacatcaagctcgccttccgccgcctcgcgctctccctccaccccgacaagcagccccccggctccgacgtcgccgccgccaccgccgccttccaggagctccagcacgcgcactccgtcctctccgacccccacgagcgctcctactacgactcccaccgctcccagatcctcttctccgaccaccacccctcctccggccccggccgcggcggcggcgtcgcctccgcctccgcgtcccccgtccccgacctcttcgccttcttctcctcctccgccttctccggcttctccgactccggccgcggcttctacaaggtctacggcgacgtcttcgaccgggtcttcgcgcaggagctcgcctacgcccgccgcatgggcatgcccgccgacgccgtccccacgccgccggtgatcgggaacctcgattccccccacgcgcaggtcgccgcgttctacagctactggctcgggttcggcaccgcgatggacttcgggtgggcggccgagtgggacgccgcgcggggggagagccgccgggtgaggcggctcatggaggaggacaacaagaaggcgacgcgcaaggcgcggcgggagtacaacgacgccgtgagagggctcgccgcgttctgcaagaagagggacaagcgggtggtggacatggcgctgaagaagaaggtggaggaggagaagaggaaggcggaggaggcggcgaggaagaaggaggaggagaggaggaggaaggagcgagcgatggcgtaccaggagcccgagtgggcgagggtggacgaggatgaggcggcggtgtttgaggacgacgaggaggaggagacgagggcgaagaggaaggaggagctgtactgcgtggcgtgtaataagaagttcaagtccgacaagcagtggaagaaccatgagcagtcaaagaagcatagagataaggtgtccgagctgaggatggtgtttgaagaagaggaagaagctttgaaggatgctgaagaagaggagccagaagaagttgatgtggggtttgattttcagcctgcacaggaatcagaggagagtgaattttcagatgctgctgaagagttggctgacgagttgagcgagggattggaggtgcgtgatgaagaagagaagggtgataagcacttgggtaatggggaacaaaaggttggttcatatgatgaaaccagtgtgttagaggaaatgctatcgaggtctaggcgcaagaataggaagagtggttttgtcgctcctcaggaggaagcttcaccagctggtgccatggatgatgatgacgatgaggatacaagctatgagattaataatgtcaaaaagaaaggacgccggagacgggcagcaaagaagggaggtacttatgctgataatgggcaaggtaggaagagtgagaatcagcctgaggaatccaggcataataatgatgaaaatggtgctgatgataagatggaaggtccatcttctaatgaagacagtgctgcagcaagtaaagaagatcagcagaaaggaaaaaccggtaatactaaaaagaacaagaaaggcacagaaaagaacacaactatatcttctgaacaaaagggtacatcgaagggaaagaagcaaaaggtacattcacattattttctcctgttaacttcttcatatttctttttcatgtatagttggcaggaaacttgttatgaatttgtgactaaaacccatgtattctgtttctctgtttaagtcaaagagcaaaaacttttagcctcatcagtactatgtgaatcacatatgcagatacctagccgtgtaggtgcttcaagaaccacctaactaagccacttattagaaatgcttacgtaaaagctgtgctactttatagaggaaataaccaatgttttgaattttgtggaatacatgattagagttgcttcctttgtgagaaaagaaacttgtcctgaaaatcttatgatttttgcgggtatcaacactcacatgttggattgctgttgttttatgattttttttccttatgcaaaaccctaaatctgtctttgtgcagcacagtagcagtgatcttgctcttgcttttcacattttggaaagaaacctagaggatgattttgcataggttgaaatgatatttgatagcactgattaacatagtggataatgaatattatgcttttgtgaaatacttgttggagacagcctttcttggttttgtgaaatacttgctggagacagcctttcttggttttgtgaaatacttgctggagacagcattttgtgaaatatttgatagcactgattttgtgaaatacttgttggagacaagcctttttttggtttcatgtcaattagtatattatgccttttcctgtgatgtctgttaacagtttaacttgttgatctataattggcgtatcagtttagctttctgtgtatttgttctaaatttgtgggtgtgtacacagttgcaaacagagttaaagaatcttggaagcccccctggtttcactgttatcacgattttcttatcttgttttgattaaaaagtagattagtgccacctagagcaaagagcccttccgtttgttctgtatcatgtagatgtctagtgcaaaatactttgttggagaacatacaacttgaagctgcaaatgtggaaaagttttatacgtactaattcactgtctactgttagtgcaacccgatgagcttaaaaccaaaattcggccatgccttgagtacccatgacatgttttggatatattttgtgtggataatattgtgctatgcattgtctatagattcataaaattctatatatatttctgtaagtagttataacactttgaagctaccttcttgtaccaggaggtttcaaaggcacccagtaatgactgtgaaacgtgtggatcaacgtttgactcaaggtatgtacttgaagttcagctttccttttcctctccttccctttcatttgcactttcccatcatatgttgctatcttacaatgaaattggaaacgcagttatggtttgtctcaaatacttcttgttgcaggaacaagttgttttctcacttggaagaaacaggtcatgcaatgctgaagacacgacagaaaaatcgctgaagaggacaagaaagtagttttcttttaccgtttgtcccagttgatgctgatagattagcacatcgacaaaaaggccatatatctggtttatagcccaattttgatatgtgtagtagagccgttttctttcttcctggatttgtttcattggtttgtggtacagaatgacaagaactaattattattattcaatcgaaatacacaccatcttgtaatttttctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0502700, RefSeq:Os12g0502700