BGIOSGA013742

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Revision as of 10:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013742| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013742, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013742

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013742, complete gene.

LocusTag

OSJNBA0052F07.14

Ensembl Transcript ID

BGIOSGA013742-TA

Ensembl Protein ID

BGIOSGA013742-PA

Length

3306

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37638971..37642276

Sequence Coding Region

37638971..37639149,37639270..37639371,37639555..37639687,37639826..37639917,37640199..37640298
,37640396..37640468,37640550..37640670,37641312..37641431,37642037..37642107
,37642182..37642276

Genome Context

<gbrowseImage1> name=IndicaChromosome03:37638971..37642276 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:37638971..37642276 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGAGGTCGGGATTGGAAGGGCGACCTGCGCGGCGTGGGCGCGGCGGCGGGGCGGGGGCGGCCCGGCACGCCTCCTCGTCGTGTACGGCCGCGCCGCCACGGCATCGTCCCCGCCGCGCATCGACCTCCACGCGTTCGACGCCGGCGCCTCCGCCGTCGCCGCCGACCCCCTGGTGAGCTTCGTGATGGGACACGAGGAAGACGACGCCCCGCGCGCGATCGTCGTGCACCCGAGCGGCGACGAGTTCGTCTGCGCCACCGCGAAAGGGTGCAGGTTATTCAAGCTGGTGACTGAAGAATCCAGTGTTCACCTTTTTTCAAAGGATGCTCCAACTCTGCAATCAATTGGACCTCAGAAATGTCTGTCATTCAGTACAGATGGTGCGAAGTTTGCTGTTGGTGGTGAGGATGGGCATCTTAGAATATTTCATTGGCCAGATCTGAATTTGCTTCTGGGTGAACCAAAAGCTCATAAATCTTTCAGAGACATGGACATTAGCTTAGACTCCGAGTTTTTAGTCTCAACATCCACTGATGGTTCTGCAAGAATATGGAATATAAATGAGGGAGCGCCGCTTGTCAATTTGAGTAGATCTTCGGATGAGAAGATTGAGTGCTGCTGCTTTTCTAGGGATGGAAATAAACCTTTCCTGTTCTGCACACTTGTGAAAGGTCATAACGTTGTGACTGTGGTTTTGGACATAAGTAATTGGAAGAGGATCGGGTACAAGAGGCTTTTGGAAAAGCATATCTCCACACTTTCAGTAAGCTTGGACGGAAAGTATCTCGCATTAGGAAGCCATGATGGTGATTTCTGCGTTGTGGATGTTAAAAAGATGGAAGTTTTGCACTTGAGCAAGAAGGTTCATCTTGGCTCTCCAATTTCATCAATTGAATTTTGTCCTACAGAAAGGGTTGTAATCTCCACTTCTCATAAATGGGAAGCAGAGGTAACGAAACTTGATGTTCCTACTGATTGGAAAGTGTGGCAAATGTGGTTAGTACTCTCGTGTCTGTTTGTCACGTCGGCCATCCTATTCTATGCGTTCTTCAAACACGTGGTCCATTTGGAACCCTAA</cdnaseq>

Protein Sequence

<aaseq>MAAEVGIGRATCAAWARRRGGGGPARLLVVYGRAATASSPPRIDLHAFDAGASAVAADPLVSFVMGHEEDDAPRAIVVHPSGDEFVCATAKGCRLFKLVTEESSVHLFSKDAPTLQSIGPQKCLSFSTDGAKFAVGGEDGHLRIFHWPDLNLLLGEPKAHKSFRDMDISLDSEFLVSTSTDGSARIWNINEGAPLVNLSRSSDEKIECCCFSRDGNKPFLFCTLVKGHNVVTVVLDISNWKRIGYKRLLEKHISTLSVSLDGKYLALGSHDGDFCVVDVKKMEVLHLSKKVHLGSPISSIEFCPTERVVISTSHKWEAEVTKLDVPTDWKVWQMWLVLSCLFVTSAILFYAFFKHVVHLEP</aaseq>

Gene Sequence

<dnaseqindica>1..179#300..401#585..717#856..947#1229..1328#1426..1498#1580..1700#2342..2461#3067..3137#3212..3306#ATGGCGGCGGAGGTCGGGATTGGAAGGGCGACCTGCGCGGCGTGGGCGCGGCGGCGGGGCGGGGGCGGCCCGGCACGCCTCCTCGTCGTGTACGGCCGCGCCGCCACGGCATCGTCCCCGCCGCGCATCGACCTCCACGCGTTCGACGCCGGCGCCTCCGCCGTCGCCGCCGACCCCCTCGTGAGCGCTCCCCGTCCGTCCTCCCGCACGCGCGCGCTCCGGCGGCGTTGTCTGCTCTTCGCGTACGTTCGGTCTGAGCTTGAGTCGCGGCGTTGCGTTTGTGCTCGCGGGTTTTCGCAGGTGAGCTTCGTGATGGGACACGAGGAAGACGACGCCCCGCGCGCGATCGTCGTGCACCCGAGCGGCGACGAGTTCGTCTGCGCCACCGCGAAAGGGTGCAGGTGAGTTCTGAATCGCTCCCGCTAACTCAGACACTCATTCTGATCAGCTTGATTTGCACTAACTTTTGTCAGAGTTTATACTTGCTGTTGCTGATAAAAAGCTCATGTTTCATACTCCCAAATCACTTGAAATTCAGATATACCTGTCAGCGTTGTTAGATCATCAGCCAACTACTGTTGTAGGTTATTCAAGCTGGTGACTGAAGAATCCAGTGTTCACCTTTTTTCAAAGGATGCTCCAACTCTGCAATCAATTGGACCTCAGAAATGTCTGTCATTCAGTACAGATGGTGCGAAGTTTGCTGTTGGTGGTGAGGTACCATGTTATCCAATCTGTTTATTATGCACTTCGCTCTTTGTCAGTAGAATCATAACTTCAGATTCTGCAGTCACAAGTTTGGCTTCTTAATTCTTATACAAGGTTTCCTGATACCATTTTTTCTGGCAACTATAGGATGGGCATCTTAGAATATTTCATTGGCCAGATCTGAATTTGCTTCTGGGTGAACCAAAAGCTCATAAATCTTTCAGAGACATGGACATTAGGTGAGAAAAAGCAGAAGCATTGCCTATTCTTTTGACAAACATAAGCATAAATCGACAGAATCCTCCTTGACATTATACATAAACTGAATTAGTCATATCAATATCATTCAATATGTTGCATTGCACAAGTAACAAGGTAGTTTTAAATATAGGCTCTGCCTAAGAGTTACTTTCTTGGGTGTAAGGATAATTACTGCCCAACGTTTTTAACATAACTTTATTTCACAAAATAAAGTCATTTTGGCAGATTTTGATCTTTATATTGTTCCTCCTTCTTGCAGCTTAGACTCCGAGTTTTTAGTCTCAACATCCACTGATGGTTCTGCAAGAATATGGAATATAAATGAGGGAGCGCCGCTTGTCAATTTGAGTAGATCTTCGGTATCGTATGATAAATTACTGCACTTTTCTATTTTGGTAGTTGAAACTGAGTCATTTATTTGACTCTCTTGTTTATATTTGTTCCCCCCCTTTACAGGATGAGAAGATTGAGTGCTGCTGCTTTTCTAGGGATGGAAATAAACCTTTCCTGTTCTGCACACTTGTGAAAGGTAATATATTCCATAACTCTCAATAGGATGTTAATATGTGCACCACCAGCCACTTTAATCAAATCCTTATTGCTTGAATAGGTCATAACGTTGTGACTGTGGTTTTGGACATAAGTAATTGGAAGAGGATCGGGTACAAGAGGCTTTTGGAAAAGCATATCTCCACACTTTCAGTAAGCTTGGACGGAAAGTATCTCGCATTGTAAGTTCATTGTTTCTGCCTCTTACTGTCACATGCCATACACTCATCCTGACTATAGCAATACTGTTATGTAGCATTTGAGAGCCTTTTTATGGTGTTATGGACTGGTCATAATAGGGTAGTTTCCATTTCTCGCATTTCTCACCACTCAATCACTCATCCATATTGATGTATACTTCTTTAGCTGACTTCTCCTTTTGACAAATTTATGCATGTTCTTAGAGAGAATTTACAGAATACTTGCACATCATTATATTTATGCATGTTCTGACAAAGCTGTGGCTGATGACATTTGTTTAGTCTCATATTTCTGGAAAATTACAAAAAAAAAAATGTATATAGTAGTGGGGAGGGTACCAGAAGTGTGTTCAATTGACTGAAGAACTTGTTAGCTGGCCACCTCATAATTAATCATTATATGTTATTGTTACTCTCTTGGGGAGTTAGATATTGAAAGAAACCTAGATACCTGTTTTGTTTTGATAAAAATAAAAGGAACATATACACTTGCTATTCTACTTCACCTTCAAATTTGACACGTGTCTGAAATCCTAAATCTGTTGCTGTATGTGCATTAGTTCATAATCTTCTTTTCGTACATATTTTATATTTTTGGATGTATTTTCACCCTTTGTTATTAGAGGAAGCCATGATGGTGATTTCTGCGTTGTGGATGTTAAAAAGATGGAAGTTTTGCACTTGAGCAAGAAGGTTCATCTTGGCTCTCCAATTTCATCAATTGAATTTTGTCCTACAGAAAGGTAATTATAACCATTGGTCTTTGTTGGAAGAAGTAGTGAGACAAACCGAAAATCTCTAGCAGTAAAATAGTTGGCTTCACTAAGCATCCAAGCACTTAGTAATGATCTCTGGTTGTACCAATGTTGAAATTTTTAGCAGTAAATTGTCTTCACTAGTAATTTGTTCAGTGCTAGAATTCTTGAAGATACTCCGAAGATCCAGCATTAAGGTATTAGATTGCCCACATGCCTTCTCAACATGTTTAAAAAATGGATCACACAACACGATGGTAGGTAGATAAGCGAGCTATGGTATCAGCATTATGCATGGCTAATTTGCATATACATGGGGGCAGGATAGAGCAAGATTTGTCCTCCACCAGTTCACCTTGCCCCTGAAATTTAAAAGGAAATTGTGGATTGGTTTTACTCTGCATTTCTGCAGTCTGCACTGCAATTGTAGATCCATATGTGAATGAAGATTTGTCACATCAACTCTGTTCATAAGCAAACATACGGATGCTTAATGTTGTTTTCTGAAATTACTGTACATTTGGATGGCAATGCTGCAGATTTTTGAAGTACTGCTGGATAGTTACAGTAGCACTTGTCTGCTTGTATTGCAGGGTTGTAATCTCCACTTCTCATAAATGGGAAGCAGAGGTAACGAAACTTGATGTTCCTACTGATTGGAAAGGTACACGTTTCTGTCAATGGATTGAGTTTTGTCCTCTGTAAGTATTTACCAATATGTTTTTTTTTCCCCTGCAGTGTGGCAAATGTGGTTAGTACTCTCGTGTCTGTTTGTCACGTCGGCCATCCTATTCTATGCGTTCTTCAAACACGTGGTCCATTTGGAACCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013742