Os12g0502800

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0502800| Description = Similar to Ureide permease 1 (AtUPS1)| Version = NM_001073364.1 GI:115488689 GeneID:4352285| Length = 3382 bp| Defi...")
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Gene Name

Os12g0502800

Description

Similar to Ureide permease 1 (AtUPS1)

Version

NM_001073364.1 GI:115488689 GeneID:4352285

Length

3382 bp

Definition

Oryza sativa Japonica Group Os12g0502800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19306468..19309849

Sequence Coding Region

19306893..19307051,19307350..19307724,19307846..19307955,19308065..19308108,19308300..19308468
,19308806..19308944,19309059..19309295

Expression

GEO Profiles:Os12g0502800

Genome Context

<gbrowseImage1> name=NC_008405:19306468..19309849 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19306468..19309849 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacatcatagaggacaaagggggtgccattgccctcatgctggcctccctcttcttcctggggacatggcctgcggtcctcaccctcctcgagcgccgaggccggctcccgcagcacacctacctcgactactcgatcacgaacctcctcgctgcggtcctcatcgcgctcaccttcggtcagctcggcgatagcaagcccaacatgcccaatttcttcacccagctcagtcaggataattggccttcagtgctgtttgcaatggcagggggtgttgtgctcagtatagggaacctctctactcagtatgcatgggcatatgtaggtctctcagtgactgaggtcatcagctcaagtatggttgttgtaataggcacaacactgaattatttcctggacaaccgcatcaacagagcagagattcttttccctggagtggcctgcttccttgttgcagtcattcttggctctgctgtacatgcctccaatgcagctgataatgaagaaaaactaaatggctccacaaatatctataaacttggggaaaatggaagtgtggaaccaaacaaagaagtcatagaaaaagatgctcccaaggacttggagaatggagcttctgcaaccaaatatgttgccaaagctgaagcaggaactgcggaatacttgattgagctcgaagaacggcgttcgatcaaggtgttcggatcaagcaccttcatagggcttgggatagtgttcttctcaggagtctgcttctcactcttctccccggcattcaacctcgccaccaatgaccaatggcacaccctgaaacaaggtgtaccacacctggtggtgtacaccgccttcttctacttctcgatctcgtgcttcgtcatcggcatcggcctgaacatcctgttcctctaccgtccaatggccggtgtgccgaaatcatccttcaaggcttacctgaatgactgggaaggcaggcagtgggctctcctggctggcttcctatgtggctttggcaatgggtttcagttcatgggtggtcaggctgctggctatgctgctgctgatgctgtccaggcattgccacttgtgagcacattctggggaatactcctgtttggggagtaccggaaatcgtcgcgaaagacgtatatcctgctcgggttcatgctgttcatgttcatcgtcgcggtcgcggtgctcatggcttcatcaggtcacaggagcaccaagtga</cdnaseq>

Protein Sequence

<aaseq>MYIIEDKGGAIALMLASLFFLGTWPAVLTLLERRGRLPQHTYLD YSITNLLAAVLIALTFGQLGDSKPNMPNFFTQLSQDNWPSVLFAMAGGVVLSIGNLST QYAWAYVGLSVTEVISSSMVVVIGTTLNYFLDNRINRAEILFPGVACFLVAVILGSAV HASNAADNEEKLNGSTNIYKLGENGSVEPNKEVIEKDAPKDLENGASATKYVAKAEAG TAEYLIELEERRSIKVFGSSTFIGLGIVFFSGVCFSLFSPAFNLATNDQWHTLKQGVP HLVVYTAFFYFSISCFVIGIGLNILFLYRPMAGVPKSSFKAYLNDWEGRQWALLAGFL CGFGNGFQFMGGQAAGYAAADAVQALPLVSTFWGILLFGEYRKSSRKTYILLGFMLFM FIVAVAVLMASSGHRSTK</aaseq>

Gene Sequence

<dnaseqindica>2799..2957#2126..2500#1895..2004#1742..1785#1382..1550#906..1044#555..791#gtgccacttctttggtttcatgccaaaaggtactctgctctacttgcttgatgttcttcttccccttccttgtgtgtttatgtgtttaattgggagtttggatctcttctcatcctcagcagaatctgatctttgaagaattggggatttagggttccaagaactgggagtctttcatgctgataagtgataaggatagcttatccacaatttgggatcttccctatggctgttggaatgaatttgatttcctgatttcttttccttccttttttttcttgtgtttcttgtaatgatattattgcttgctgtaacaagcaagaatgaagagatggagatttgaggacagtattaaatgcaaaacactttctgattttacaagattttgtggataacaactgcaagatcttgaaacttcttgatgattcaatccaaatgagtagcagctcaaccctcttacatgatgaaaaaatgtgttttattttattttttgtcaggtttttgaaggcccccttgtgaattccctgttgtccatcagacaaggaggcctcaagatgtacatcatagaggacaaagggggtgccattgccctcatgctggcctccctcttcttcctggggacatggcctgcggtcctcaccctcctcgagcgccgaggccggctcccgcagcacacctacctcgactactcgatcacgaacctcctcgctgcggtcctcatcgcgctcaccttcggtcagctcggcgatagcaagcccaacatgcccaatttcttcacccagctcagtcaggttagccaccttctcttaagcatctgaaatagtatatccctgaattaatacatttctgattgttagttagtctgaaattttgctgacagtgatttttttttgtttgcaatgaaggataattggccttcagtgctgtttgcaatggcagggggtgttgtgctcagtatagggaacctctctactcagtatgcatgggcatatgtaggtctctcagtgactgaggtcatcagctcaagtatggttgttgtaataggtaggtaaaacttctcttttacaacactgcaacatatattattgtttgatttttttttaagtaaagaaaattgagggaaaattattgattcttggtgatacatgtgaagtacagctcatcacaacctatctatatttatgttagtcgaagaaactgaataattaggttagtaatagtatgaatacattatagttggtcctactcctgaaaagaacatatattcagatcaatatctccagtttactttattcagtagctacagcaaactaattgctgtatccattattattgtcctaattattcagtagatcagaaaactcacatgttggatcttcaggcacaacactgaattatttcctggacaaccgcatcaacagagcagagattcttttccctggagtggcctgcttccttgttgcagtcattcttggctctgctgtacatgcctccaatgcagctgataatgaagaaaaactaaatggctccacaaatatctataaacttgggtaagatatttcacatttttcaacacatcaagatatttcacatcaagatacataaaacacattacacactggttagcctatctggatacctctgttagaaaatatattatgccttaggttccaatctatttaaagattctgcgtcttttaatttactgacccctatgatcttaataacctgtaatttccagggaaaatggaagtgtggaaccaaacaaagaagtcatagaaaaaggtatgccataaccttttctttaaaaaaaaaactgactttaatgttgtaagtactagtaatgttgatttcttgcagatcagatcctagttcttaactctgccaatttcagatgctcccaaggacttggagaatggagcttctgcaaccaaatatgttgccaaagctgaagcaggaactgcggaatacttgattgagctcgaagaacggcgttcgatcaaggtaattcggtcactgccattctaatcatcctttatcatgcttgttgaatcaataccaaaattatggatgaaaacttgtaccaatgaactagattgatctgatgaacctctccgttgcgcaggtgttcggatcaagcaccttcatagggcttgggatagtgttcttctcaggagtctgcttctcactcttctccccggcattcaacctcgccaccaatgaccaatggcacaccctgaaacaaggtgtaccacacctggtggtgtacaccgccttcttctacttctcgatctcgtgcttcgtcatcggcatcggcctgaacatcctgttcctctaccgtccaatggccggtgtgccgaaatcatccttcaaggcttacctgaatgactgggaaggcaggcagtgggctctcctggctggcttcctatgtggctttggcaatgggtttcagttcatgggtggtcaggctgctggctatgctgctgctgatgctgtccaggttagtccaatctccaaatcttatcatttcttcacatcagaagagaaattcatcgtgttcgcgatggctgtggcgagattctagatctttcagacaaattctcttcaagtttagcaattcagacaatcttcagataactgcaacttattattctagatctttagataaattcagatactgaacatcatactagatcttccaggcaaattcttcaggtttagcagttcacactatcttcagagaagtacaacttttctggactatgattctaactgcttcagcattgctgtttcatcaggcattgccacttgtgagcacattctggggaatactcctgtttggggagtaccggaaatcgtcgcgaaagacgtatatcctgctcgggttcatgctgttcatgttcatcgtcgcggtcgcggtgctcatggcttcatcaggtcacaggagcaccaagtgattgattcaaatcctttcatctcttgccttaatttggtgtttgcaagcgcaaaccactcttgctgtcagaaaacaaagaagttcaggcagcaatgcagggggggacttcagtccaggtctccaggaagcagatcatgccaacatggaatgaaactccattcatgaaatttccatttggatggagctgtacataaggggaaaaaaggaacaaactaagatagtttgtggatttgtgattttaagtttgtgtcagattatataaatgtaatgttatccctttctctgaattctaaaagacccatttgcagatagcatagggaaatttggagttcacctgaatgataagaaagatagtaactgttttggtttcgatgctgatgttcagtgcttaaaatttgaaatggtacatgacatacgagttgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0502800, RefSeq:Os12g0502800